CC1G_15617
Coprinopsis cinerea Okoyama 7
General data
| Systematic name | CC1G_15617 | Strain | Coprinopsis cinerea A43mutB43mut pab1-1 #326 |
|---|---|---|---|
| Standard name | - | Synonyms | |
| Uniprot id | D6RNE7 | Functional description | Protein kinase subdomain-containing protein PKL/ccin3 |
| Location | Chr_6:1769201..1770138 | Strand | + |
| Gene length (nt) | 938 | Transcript length (nt) | 810 |
| CDS length (nt) | 810 | Protein length (aa) | 269 |
Reciprocal best hits in model fungi
| Strain name | Gene / Protein name |
|---|---|
| No records | |
Orthologs in mushroom models
| Strain name | Gene / Protein name | Pident | E-value | Bits | |
|---|---|---|---|---|---|
| No records | |||||
Expression
| Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Coprinopsis cinerea mycelia exposed to different biotic and abiotic stress conditions | Identification of a Novel Nematotoxic Protein in Coprinopsis cinerea | Plaza et al. 2016 | RNA-seq | |||||||||||||||||||||||||||||
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General data
| Systematic name | - |
|---|---|
| Protein id | 13168 |
| Description | Protein kinase subdomain-containing protein PKL/ccin3 |
Annotation summary
Conserved domains
| Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
|---|---|---|---|---|---|
| No records | |||||
SignalP
| Prediction | Start | End | Score |
|---|---|---|---|
| No records | |||
Transmembrane domains
| Domain n | Start | End | Length |
|---|---|---|---|
| No records | |||
InterPro
| Accession | Description |
|---|---|
| No records | |
GO
| Go id | Term | Ontology |
|---|---|---|
| No records | ||
KEGG
| KEGG Orthology |
|---|
| No records |
EggNOG
| COG category | Description |
|---|---|
| G | Protein kinase subdomain-containing protein PKL ccin3 |
CAZy
| Class | Family | Subfamily |
|---|---|---|
| No records | ||
Transcription factor
| Group |
|---|
| No records |
Conservation of CC1G_15617 across fungi.
Arrow shows the origin of gene family containing CC1G_15617.
Protein
| Sequence id | 13168 |
|---|---|
| Sequence |
>13168 MFSTLLIHTCGTIGGRSTTITLKVSPSFPGAIWFRERRGEPAPKTWDSKDVSKANGTLELSLLGRIAEGRIGVTH IAKVVSSSVAVWRERHGSTSSSIPNFYGFFSSSMAEQPAFPNLEFTPWTNRKHRIEETDSPPSDIDEFPSPDWLA DDVPPYPGDLPSYEDPSGYQKTSSWYRWGRPQENPTISVIVLEHLGETCTGDRARGNDVLMAVREVLEDIAEHGL IHSNVTAWNALSLRDRADIGKDRGNPRVAGHLPLPPPPKTPTPD |
| Length | 269 |
Coding
| Sequence id | CC1G_15617T0 |
|---|---|
| Sequence |
>CC1G_15617T0 ATGTTCTCAACACTCCTTATTCATACCTGCGGCACTATTGGAGGCAGGTCAACAACGATAACCCTCAAAGTCTCA CCATCATTCCCTGGTGCCATCTGGTTTCGAGAGCGTCGCGGTGAGCCAGCTCCCAAGACCTGGGACTCCAAAGAC GTCTCCAAAGCCAATGGCACATTGGAGCTTTCCCTTCTCGGACGCATTGCTGAAGGCCGTATTGGTGTGACACAC ATCGCCAAAGTCGTCTCCAGTTCAGTCGCAGTTTGGCGCGAGAGGCATGGGTCTACGAGCAGCTCGATTCCCAAC TTCTACGGCTTCTTTTCGTCGTCCATGGCGGAGCAGCCCGCTTTTCCAAACCTCGAATTTACACCATGGACAAAT AGGAAGCACCGAATTGAAGAAACAGATAGCCCTCCTAGCGACATCGACGAGTTCCCTTCGCCAGACTGGCTTGCC GACGACGTGCCGCCTTACCCTGGAGATCTACCGAGCTACGAAGACCCATCTGGATACCAGAAGACCTCGTCATGG TATAGATGGGGTCGCCCACAAGAAAATCCAACGATCAGTGTCATCGTTCTCGAGCACCTGGGAGAGACGTGTACC GGGGACCGAGCTCGAGGGAACGACGTGCTAATGGCAGTGAGAGAGGTCCTGGAGGACATTGCTGAGCATGGTCTT ATTCATTCGAACGTTACGGCTTGGAACGCCCTTTCCCTCAGGGATAGGGCGGACATAGGGAAGGACAGGGGTAAC CCCCGGGTAGCCGGACACCTACCCTTACCCCCACCCCCCAAAACCCCTACCCCTGAC |
| Length | 810 |
Transcript
| Sequence id | CC1G_15617T0 |
|---|---|
| Sequence |
>CC1G_15617T0 ATGTTCTCAACACTCCTTATTCATACCTGCGGCACTATTGGAGGCAGGTCAACAACGATAACCCTCAAAGTCTCA CCATCATTCCCTGGTGCCATCTGGTTTCGAGAGCGTCGCGGTGAGCCAGCTCCCAAGACCTGGGACTCCAAAGAC GTCTCCAAAGCCAATGGCACATTGGAGCTTTCCCTTCTCGGACGCATTGCTGAAGGCCGTATTGGTGTGACACAC ATCGCCAAAGTCGTCTCCAGTTCAGTCGCAGTTTGGCGCGAGAGGCATGGGTCTACGAGCAGCTCGATTCCCAAC TTCTACGGCTTCTTTTCGTCGTCCATGGCGGAGCAGCCCGCTTTTCCAAACCTCGAATTTACACCATGGACAAAT AGGAAGCACCGAATTGAAGAAACAGATAGCCCTCCTAGCGACATCGACGAGTTCCCTTCGCCAGACTGGCTTGCC GACGACGTGCCGCCTTACCCTGGAGATCTACCGAGCTACGAAGACCCATCTGGATACCAGAAGACCTCGTCATGG TATAGATGGGGTCGCCCACAAGAAAATCCAACGATCAGTGTCATCGTTCTCGAGCACCTGGGAGAGACGTGTACC GGGGACCGAGCTCGAGGGAACGACGTGCTAATGGCAGTGAGAGAGGTCCTGGAGGACATTGCTGAGCATGGTCTT ATTCATTCGAACGTTACGGCTTGGAACGCCCTTTCCCTCAGGGATAGGGCGGACATAGGGAAGGACAGGGGTAAC CCCCGGGTAGCCGGACACCTACCCTTACCCCCACCCCCCAAAACCCCTACCCCTGACTGA |
| Length | 810 |
Gene
| Sequence id | CC1G_15617T0 |
|---|---|
| Sequence |
>CC1G_15617T0 ATGTTCTCAACACTCCTTATTCATACCTGCGGCACTATTGGAGGCAGGTCAACAACGATAACCCTCAAAGTCTCA CCATCATTCCCTGGTGCCATCTGGTTTCGAGAGCGTCGCGGTGAGCCAGCTCCCAAGACCTGGGACTCCAAAGAC GTCTCCAAAGCCAATGGCACATTGGAGCTTTCCCTTCTCGGACGCATTGCTGAAGGCCGTATTGGTGTGACACAC ATCGCCAAAGTCGTCTCCGTAACGCATGGCCCCCTGGACCCACAAGCAAGGCTTCCAGACACCGTCTGCCTCAAG TTTGCCAAACCAGAGTTCAGTCGCAGTTTGGCGCGAGAGGCATGGGTCTACGAGCAGCTCGATTCCCAACTTCTA CGGCTTCTTTTCGTCGTCCATGGCGGAGCAGCCCGCTTTTCCAAACCTCGAATTTACACCATGGACAAATAGGAA GCACCGAATTGAAGAAACAGATAGCCCTCCTAGCGACATCGACGAGTTCCCTTCGCCAGACTGGCTTGCCGACGA CGTGCCGCCTTACCCTGGAGATCTACCGAGCTACGAAGACCCATCTGGATACCAGAAGACCTCGTCATGGTATAG ATGGGGTCGCCCACAAGAAAATCCAACGATCAGTGTCATCGTTCTCGAGCACCTGGGAGAGACGTGTACCGGGGA CCGAGCTCGAGGGAACGACGTGCTGTAAGTGCGCCTGCTACAGCCGCCCCATCCGCACTCTTTACTGAATTCCAC ACTCCAGAATGGCAGTGAGAGAGGTCCTGGAGGACATTGCTGAGCATGGTCTTATTCATTCGAACGTTACGGCTT GGAACGCCCTTTCCCTCAGGGATAGGGCGGACATAGGGAAGGACAGGGGTAACCCCCGGGTAGCCGGACACCTAC CCTTACCCCCACCCCCCAAAACCCCTACCCCTGACTGA |
| Length | 938 |