CopciAB_138391
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_138391 Strain Coprinopsis cinerea Okayama 7
Standard name YAK1 Synonyms 138391
Uniprot id Functional description Serine/Threonine protein kinases, catalytic domain
Location scaffold_4:2645573..2650166 Strand +
Gene length (nt) 4594 Transcript length (nt) 4149
CDS length (nt) 3678 Protein length (aa) 1225

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Neurospora crassa prk-2

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7261724 66.9 0 1624
Hypsizygus marmoreus strain 51987-8 Hypma_RDB24920 64.6 0 1603
Pleurotus eryngii ATCC 90797 Pleery1_1379755 70.6 0 1301
Grifola frondosa Grifr_OBZ67161 56.1 0 1292
Lentinula edodes NBRC 111202 Lenedo1_1171265 53.7 0 1249
Schizophyllum commune H4-8 Schco3_2739833 68.1 0 1246
Lentinula edodes W1-26 v1.0 Lentinedodes1_16427 53 0 1238
Ganoderma sp. 10597 SS1 v1.0 Gansp1_18410 69.8 0 1024
Auricularia subglabra Aurde3_1_1159901 55 5.716E-291 925
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_69717 86 1.216E-265 850
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_36909 86 1.267E-265 850
Pleurotus ostreatus PC15 PleosPC15_2_28329 86.5 1.492E-264 847
Pleurotus ostreatus PC9 PleosPC9_1_37574 86.5 1.461E-264 847
Lentinula edodes B17 Lened_B_1_1_2628 50.1 2.782E-171 572
Flammulina velutipes Flave_chr07AA00594 47.8 1.67E-106 376

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 239.4325 20.2774 11.7072
oidia 179.2676 16.7957 9.697
vegetative_mycelium 173.5952 5.121 2.9566
primordia 106.6644 8.6612 5.0005
hyphal_knot 169.4886 2.4797 1.4317
young_fruiting_body 278.4322 1.4474 0.8357
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 159.3929 11.5059 6.6429
Wheat bran 89.6055 33.851 19.5439
Horse manure 155.149 71.7002 41.3961
Oak leaves 267.2722 60.7284 35.0615
Hay 148.0798 25.982 15.0007
Corn stalk 207.7018 14.5177 8.3818
Pectine 204.4895 9.1654 5.2917
Microcrystalline cellulose 158.762 38.7711 22.3845
Xylose 164.2167 31.2901 18.0653
Cellobiose 143.3811 30.1338 17.3978
Lignin 183.3565 31.7645 18.3392
Apple peels 221.3405 23.1286 13.3533
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 122.8923 8.3552 4.8239
Bsubtilis 130.7028 22.321 12.887
Ecoli 115.7034 2.2436 1.2954
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 56.1737 2.8631 1.653
BS 4h 31.3733 1.6744 0.9667
BS 8h 31.1632 11.5398 6.6625
BS 12h 51.1338 3.2721 1.8891
Oidia 0 h 35.3608 14.3917 8.309
Oidia 18 h 72.9511 26.055 15.0429
Sclerotia 27.9485 6.7942 3.9226
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 44.57 7.7922 4.4988
DM 36h 55.9808 20.1924 11.6581
DM 60h 69.2391 9.6367 5.5637
DM 84h 73.4766 7.7762 4.4896
DM 108h 67.3335 12.0023 6.9295
DM 132h 63.7409 8.1503 4.7056
DM 156hAE 82.0591 15.363 8.8699
ELI1hAE 52.083 13.5981 7.8509
ELI2hAE 52.6076 7.6358 4.4085
LI2hAE 59.6169 10.879 6.281
LI6hAE 90.6622 26.0971 15.0672
LI12hAE 40.3951 5.8872 3.399
LI18hAE 35.4883 6.3373 3.6588
LI 24hAE 41.0778 13.823 7.9807
DM 156hAM 34.8213 7.7914 4.4984
ELI1hAM 29.0001 13.7485 7.9377
ELI2hAM 35.06 2.9305 1.6919
LI2hAM 38.4472 6.623 3.8238
LI6hAM 52.4376 4.5557 2.6302
LI12hAM 40.9335 14.5562 8.404
LI18hAM 44.0676 7.6864 4.4378
LI 24hAM 44.2734 11.0215 6.3632
LI 24hHK 23.9121 2.8052 1.6196
L/D 6h 28.1519 5.2047 3.0049
L/D 12h 29.2497 7.3903 4.2668
L/D 18h 45.3854 2.1624 1.2485
L/D 24h 43.7876 6.0712 3.5052
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 68.6716 6.1558 3.5541
Hyphal knots 78.9787 1.9687 1.1366
Primordium 1 76.9998 3.5319 2.0392
Primordium 2 72.1913 11.0095 6.3563
Young Fruiting body cap 82.3682 4.3092 2.4879
Younf fruiting body gill 81.5034 48.6825 28.1068
Young fruiting body stipe 171.3944 42.8047 24.7133
Mature fruiting body cap_gill 891.9159 258.6218 149.3154
Mature fruiting body stipe 698.6145 112.097 64.7193
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 182.6616 12.8837 7.4384
NH4NO3 169.7066 10.7847 6.2266
Proline 164.4052 32.3104 18.6544
Tryptophan 178.8524 13.4211 7.7487
Isoleucin 177.4618 4.2578 2.4582
Arginine 173.7982 12.9329 7.4668
Metionine 150.8204 4.2117 2.4316
NaNO3 155.4354 3.6146 2.0869
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 182.6616 12.8837 7.4384
Citrus peel 90.2003 9.1936 5.3079
Poplar leaves 157.6634 20.1623 11.6407
Typha leaves 148.3128 25.3293 14.6239
Overwintered Salix leaves 144.1644 20.08 11.5932
Reed flowering 149.3441 17.9361 10.3554
Tigernut 117.7622 11.3891 6.5755
Energy cane 150.7286 19.1278 11.0434
Guar gum 167.0404 38.6482 22.3135
Apple peels 115.5864 31.7673 18.3409
Cellobiose 147.8453 11.109 6.4138
Corn stalk 166.0352 7.8417 4.5274
Horse manure 137.499 4.1926 2.4206
Lignin 95.7969 38.9637 22.4957
Microcrystalline cellulose 126.2038 16.4821 9.516
Oak leaves 142.5916 37.3365 21.5562
Pectin esterified 85.6111 14.5721 8.4132
Poplar sawdust 125.4258 39.3152 22.6986
Wheat bran 78.3802 16.0723 9.2794
Chlamydomonas reinhardtii 139.4299 15.9166 9.1894
Vertatryl alcohol 123.015 13.0209 7.5176
Furfural 147.6747 11.2293 6.4833
Autoclaved mycelium 148.1698 2.6243 1.5152
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 160.2822 17.2219 9.9431
Ribose 182.093 16.5914 9.579
Mannose 187.1053 2.1779 1.54
Fructose 177.2518 12.6551 7.3064
Arabinose 199.3558 9.7034 5.6023
Xylose 192.7669 15.3089 8.8386
Galacturonic acid 175.7069 20.4418 11.8021
Rhamnogalacturonan 170.1781 6.6579 3.8439
Pectin esterified 172.8549 10.2218 5.9015
Polygalacturonic acid 168.0881 7.6501 4.4168
Sodium acetate 197.8107 5.766 3.329
No nitrogen 189.2684 30.7039 17.7269
BSA 178.3229 2.6986 1.558
Glutamine 180.541 14.5408 8.3951
No phosphate 170.1318 16.8392 9.7221
No carbon 185.221 1.706 1.2063
No sulphur 176.161 11.7838 6.8034
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 182.6616 12.8837 7.4384
Amylose 139.1337 14.2324 8.2171
Fucose 137.018 10.1509 5.8606
Galactose 148.9416 8.2403 4.7576
Lactose 157.4462 11.35 6.553
Maltose 171.8251 23.4692 13.5499
Mannitol 171.1415 14.0342 8.1027
Rhamnose 156.0822 8.5657 4.9454
Sorbitol 147.7903 12.0655 6.966
Trehalose 151.9035 22.6381 13.0701
Glycerol 154.989 16.153 9.3259
Glucuronic acid 179.8344 1.2052 0.6958
Arabinan 121.5959 14.5378 8.3934
Galactan 137.5862 3.4265 1.9783
Galactomannan 157.9171 19.496 11.256
Glucan 135.1596 7.7415 4.4695
Xylan 141.0933 16.7452 9.6679
Xyloglucan 174.4302 14.6891 8.4808
Arabinogalactan 169.0991 11.5968 6.6954
Pectin 102.5223 55.3041 31.9299
Rhamnogalacturonan 127.0799 40.9639 23.6505
Polygalacturonic acid 159.1942 12.2247 7.0579
Mannan 147.2634 7.5578 4.3635
Amylopectin 101.7355 5.7658 3.3289
Inulin 163.4262 6.9814 4.0307
BSA 138.4036 15.8816 9.1693
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 69.2391 9.6367 5.5637
2h WAT 60.5934 11.0611 6.3861
4h WAT 43.036 3.0623 1.768
8h WAT 44.6536 10.0062 5.7771
16h WAT 50.7781 10.6468 6.1469
24h WAT 47.8332 13.2461 7.6476
WAT hyphal knot -30h 31.4948 3.7209 2.1483
WAT hyphal knot -22h 48.7624 4.4429 2.5651
WAT hyphal knot -15h 49.2131 5.6539 3.2643
WAT hyphal knot -7.5h 33.4477 18.3103 10.5714
WAT hyphal knot 37.69 9.3024 5.3707
WAT hyphal knot +7.5h 51.365 13.8705 8.0081
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 100.4947 52.4274 30.269
Straw 3h 113.0767 41.5617 23.9957
Straw 6h 85.5967 40.7422 23.5225
Straw 12h 146.7695 9.136 5.2747
Straw 24h 137.2421 26.2058 15.1299
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 44.8716 5.9884 3.4574
Frost (-20C, 30min) 35.9255 4.6553 2.6877
Heat shock (47C, 2h) 41.8947 3.0734 1.7744
High CO2 38.945 6.4708 3.7359
Drought (4% agar, 12h) 37.9078 4.7592 2.7477
Oxidative (1mM H2O2, 3h) 39.1422 1.3819 0.7979
Acidic (pH4, 3h) 39.0288 9.4798 5.4732
Alkaline (pH9, 3h) 30.4586 5.5975 3.2317
Osmotic (sorbitol 2h) 36.5693 4.2355 2.4454
CongoRed (3h) 34.6853 8.9948 5.1932
Cobalt chloride control 41.3768 9.2196 5.3229
Cobalt chloride 2mM 40.537 9.1002 5.254
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 44.0751 19.9336 11.5087
Cold stimulation 28.2716 8.5452 4.9336
Scratched surface 32.0596 4.8536 2.8022
Ca2+, 200mM, 24h 44.4869 10.9457 6.3195
Cu2+, 2mM, 6h 43.6184 13.4528 7.767
Voriconazole 32.8346 8.9781 5.1835
Trichoderma interaction, early 36.7221 6.3748 3.6805
Trichoderma interaction 60h 29.8032 23.536 13.5885
Cobalt chloride 2mM repeat 69.0674 23.2411 13.4182
Hypoxia 37.1461 7.5731 4.3723
Hypoxia control 38.5062 10.8776 6.2802
Protoplastation control 35.2171 0.0648 0.0458
Protoplastation 3.5h 42.4251 11.7459 8.3056
Protoplastation 1.5h 46.5151 9.9604 7.0431

General data

Systematic name YAK1
Protein id CopciAB_138391.T0
Description Serine/Threonine protein kinases, catalytic domain

Annotation summary

0 300 600 900 1200 1225

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd14212 PKc_YAK1 - 425 763
Pfam PF00069 Protein kinase domain IPR000719 428 763

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR008271 Serine/threonine-protein kinase, active site
IPR000719 Protein kinase domain
IPR017441 Protein kinase, ATP binding site
IPR011009 Protein kinase-like domain superfamily

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0006468 protein phosphorylation BP
GO:0005524 ATP binding MF

KEGG

KEGG Orthology
K18670

EggNOG

COG category Description
T Serine/Threonine protein kinases, catalytic domain

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_138391 across fungi.

Arrow shows the origin of gene family containing CopciAB_138391.

Protein

Sequence id CopciAB_138391.T0
Sequence >CopciAB_138391.T0
MSQADYMQDSNESSFDLPRWQTHVEPAAQATPYLYGPPPPSQHSMSGSSPQRIQPVHQSHTGSSTRQPRISQLLE
QEHSLSPPSNQYTPSNQAPLSRSASLGGTSASNLASRLVRRHNQPDDLEAYNTDNQGLSGPRQQPQLSQNTFYNP
SVGYQSPSMTGNVSSGTTAGSTSDSYSDLYYNGSASQPPKRIQDPNRAAGRSPHRAANPTNSTGLIDAYAQQQSQ
YSPTTATYSYGPGPPQSTGYQTHGRSNSQVKQEQATPPIASPYAPQNQSHQTPSHLAAHAPPKQSISNPPTPMSY
MHGPGSHYYPQDQSMMVDPPPKRRASGFRRVRTLHDLQPRVEANPGGRRMGSDGTYLSPLRQLTTNIVETYRICN
PSYRYESAHNPRRVLTKPSKPVHNEGYDNEDYDYILYVNDWLGTEEGHKYLILDILGQGTFGQVVKCQNMKTHEI
VAVKVIKNKPAYFNQSMMEVTILEMLNKTCDPNDEHHLLRLRDSFIHRSHLCLVFELLSSNLYELIKQNQFQGLS
TQLVKVFMAQLLDALTVLKEARLIHCDLKPENILLKSLQSPQIKVIDFGSACHERQTVYTYIQSRFYRSPEVLLG
MPYTAAIDMWSLGCIAVELFLGLPLFPGTSEYNQLTRIIEMLGMPPLSMLNSGKQTSQFFDSFDVYNPQTGQHEK
KYRLKSIEQYSREHNTNEQPGKQYFKATSLPELINTAPMPSSKSSRSQHEIEKELNNRAAFIDFCKGLLDLNPVT
RWTPQQARLHPFITGEKFTKPFVPEGLAPSQPSSSSSPNTPDPKRPYGGLVPSQPKGTRAYQDAATYNHHLAQHQ
AYTAQQASQAANTFRNPYINPPAQQQQSQQQHQQQPPSQPPVAQTTYTNPPADPYHPQSQQQQSQSQHLSGQYGS
GAAQTAHRALAHANSANQLGSGASGSQYPSHSSATNLSSSHLNPNVSSGSYYPNSRARANTINQMDTIPPALARL
QHMNQDIIGGRNALTPVLNRDDAMKEWERRQSGKPPAAQPYPQLEYLQQQAEIVAASGLANWASGPHTRYPAQPS
KLQHSYQPHTIMVDDENGNTSRRDVVMSNVRAAAGGGARTDQQSGLGSYSGSTGNLITSPPQAYSGNTAAGSRYT
TSYGQPQHPPPPASSNSFDTVDRRTDIGMYVPMQPDQYQGYPASTSTNRHAPPAGPPVPTSFYGPSIVPSGSQQQ
RNPFNVQENAQQSMGQPKDNRNWPR
Length 1225

Coding

Sequence id CopciAB_138391.T0
Sequence >CopciAB_138391.T0
ATGTCCCAAGCCGACTACATGCAAGACTCTAACGAATCGTCGTTCGACCTTCCTCGTTGGCAGACCCATGTCGAG
CCTGCAGCCCAGGCAACTCCCTACCTTTATGGCCCACCGCCGCCTTCACAGCATTCCATGTCCGGATCGTCACCC
CAACGCATCCAGCCAGTCCACCAGAGCCACACAGGTTCTTCAACCAGGCAGCCACGAATTTCTCAGTTGCTCGAG
CAGGAACACTCATTAAGCCCGCCATCCAACCAGTATACACCCTCAAACCAGGCCCCATTGTCCCGCAGTGCATCC
CTTGGAGGTACCAGCGCAAGTAACCTGGCTTCGCGCCTTGTCAGGCGCCATAATCAACCGGACGATTTGGAAGCC
TACAATACTGACAACCAAGGACTATCGGGACCCCGTCAGCAACCCCAACTCTCCCAAAACACGTTTTACAACCCC
AGTGTTGGGTATCAGTCACCATCGATGACAGGGAACGTTTCATCTGGCACGACAGCAGGCTCAACATCCGATTCC
TACTCAGATCTCTACTACAATGGTTCAGCCAGTCAACCACCAAAGAGAATCCAAGATCCCAACCGTGCCGCCGGT
CGATCGCCACACCGAGCCGCCAATCCTACCAATTCAACGGGACTCATAGACGCTTACGCTCAACAGCAATCGCAA
TACTCTCCGACAACAGCAACGTACTCGTACGGTCCTGGTCCCCCACAATCGACTGGTTATCAGACCCACGGTCGC
AGCAACTCCCAGGTCAAGCAAGAGCAAGCGACACCCCCTATAGCAAGCCCTTATGCACCCCAGAATCAGTCCCAC
CAAACGCCATCACACTTGGCTGCTCATGCTCCACCTAAGCAGTCGATCTCCAATCCGCCAACGCCAATGTCGTAC
ATGCATGGCCCAGGTTCTCATTATTACCCCCAGGACCAGTCGATGATGGTGGACCCGCCTCCTAAAAGGCGTGCA
TCAGGGTTCCGCCGCGTGCGGACGTTGCATGATCTCCAGCCCCGTGTAGAGGCTAACCCTGGGGGTCGTCGAATG
GGGAGTGACGGAACCTATCTTTCGCCTTTGCGGCAACTCACTACAAACATCGTCGAGACATACCGGATTTGCAAC
CCCAGCTATCGCTATGAATCGGCTCATAACCCCAGACGGGTTCTCACCAAGCCGAGCAAACCCGTTCACAATGAA
GGGTACGACAACGAGGATTATGATTACATTCTCTACGTCAATGATTGGCTGGGTACTGAAGAGGGCCACAAATAC
CTTATCCTTGATATTCTCGGTCAAGGAACGTTCGGCCAGGTGGTGAAATGCCAGAACATGAAGACACACGAGATT
GTCGCCGTGAAAGTGATCAAGAACAAGCCCGCGTACTTTAACCAGAGTATGATGGAGGTCACGATCCTAGAGATG
CTTAACAAAACCTGCGATCCAAACGACGAACACCACCTTCTTCGACTTCGCGATTCATTCATCCATCGAAGTCAC
CTGTGCCTCGTCTTTGAGCTTCTGTCGTCCAACCTTTACGAGTTGATCAAGCAGAATCAATTCCAGGGTCTGAGT
ACGCAACTTGTCAAGGTCTTCATGGCCCAGCTTCTCGACGCCTTGACCGTATTGAAAGAGGCACGGTTGATACAC
TGCGATTTGAAGCCTGAAAACATCCTATTGAAATCCCTTCAATCTCCTCAAATCAAAGTTATCGACTTCGGTTCT
GCGTGTCATGAACGGCAAACAGTCTACACCTACATTCAGTCGCGATTCTATCGCTCACCTGAAGTCCTTTTGGGA
ATGCCTTACACGGCAGCTATCGACATGTGGTCATTGGGCTGCATTGCCGTCGAGCTATTCCTTGGTCTACCTCTT
TTCCCTGGTACCAGCGAGTACAACCAGCTAACGAGGATAATTGAGATGCTAGGGATGCCTCCTTTGAGCATGCTC
AATAGCGGCAAGCAAACCAGTCAGTTCTTCGACTCTTTCGATGTCTATAACCCCCAAACGGGCCAACACGAGAAG
AAATATCGCCTCAAGTCCATCGAGCAGTATTCGAGGGAACACAACACCAACGAGCAGCCCGGGAAGCAATATTTC
AAGGCTACATCGTTACCCGAACTAATCAATACGGCGCCCATGCCATCTTCCAAGTCGTCAAGGTCACAGCATGAG
ATTGAGAAAGAACTCAATAACCGTGCTGCGTTCATCGACTTCTGCAAAGGCCTCTTGGATCTGAACCCTGTGACA
CGATGGACTCCACAGCAAGCGCGACTCCACCCATTCATCACCGGAGAAAAGTTTACAAAACCCTTCGTCCCCGAA
GGTCTGGCACCTTCACAACCCTCTTCTTCTTCGTCCCCGAACACCCCCGATCCCAAGCGTCCATACGGCGGTCTC
GTTCCGTCTCAGCCGAAGGGCACGCGGGCTTATCAGGACGCGGCCACTTACAACCATCATCTCGCTCAGCACCAG
GCATATACCGCCCAGCAGGCGTCGCAGGCTGCGAACACTTTCCGAAACCCGTACATCAATCCACCGGCTCAGCAA
CAGCAATCGCAGCAACAACATCAACAACAGCCACCATCCCAACCCCCTGTAGCACAAACGACCTATACAAACCCT
CCTGCGGACCCGTACCACCCTCAGTCGCAACAGCAACAGTCTCAGTCACAGCATCTCTCCGGCCAGTATGGAAGT
GGAGCGGCACAAACTGCTCACCGTGCCCTTGCACACGCGAACTCTGCGAATCAATTGGGTTCTGGAGCATCTGGG
TCACAATATCCCTCCCATTCGTCCGCCACAAACCTCTCGTCTTCGCATCTAAACCCGAATGTGTCGTCTGGTTCT
TACTACCCCAATTCTCGCGCTCGGGCCAACACGATCAACCAGATGGATACCATTCCACCTGCTCTCGCTCGACTG
CAACACATGAACCAAGACATAATCGGTGGACGAAATGCATTGACGCCGGTCTTGAACCGTGATGACGCCATGAAA
GAATGGGAGCGACGCCAATCTGGCAAACCTCCTGCTGCTCAACCGTACCCGCAATTGGAGTACCTGCAGCAGCAG
GCGGAGATCGTAGCTGCGTCTGGCTTGGCCAACTGGGCGAGTGGTCCTCATACAAGGTACCCGGCGCAACCGTCA
AAGTTGCAACACTCGTACCAACCTCATACGATTATGGTTGACGATGAGAACGGGAATACCTCTAGGAGGGATGTG
GTGATGTCCAATGTTCGCGCAGCTGCTGGTGGTGGTGCACGAACCGACCAGCAATCGGGGCTTGGCTCATACAGC
GGGAGCACTGGAAACCTCATTACGAGTCCACCACAAGCTTACTCCGGTAACACCGCGGCAGGAAGTCGGTACACG
ACAAGCTATGGGCAACCACAGCACCCGCCACCGCCAGCATCTTCCAACTCGTTCGACACGGTAGATCGGCGGACG
GATATCGGGATGTACGTGCCTATGCAGCCGGATCAGTACCAAGGCTATCCTGCTTCGACTTCGACGAACAGGCAC
GCTCCTCCGGCTGGACCGCCGGTTCCGACATCGTTCTACGGACCTTCGATCGTTCCTTCAGGATCCCAACAACAG
AGGAACCCGTTCAACGTGCAGGAGAACGCGCAGCAGTCTATGGGTCAACCTAAGGACAACCGCAACTGGCCCCGA
TAA
Length 3678

Transcript

Sequence id CopciAB_138391.T0
Sequence >CopciAB_138391.T0
AGCTTTGGTCCTTGATCATCGACCACAACGCTCCGCTCACCTTCGCCGTCGCCGTCTCCAACGCTCTTGATCCTT
TGTGAACACAAATTACGGTGTCGGGCGCTGGAGTCGTCGTGACTGCGGACTCCTGCTCGCGCCTTTTGCCGCTGA
ACCGCCACCTTTCGCAGGAATATGTCCCAAGCCGACTACATGCAAGACTCTAACGAATCGTCGTTCGACCTTCCT
CGTTGGCAGACCCATGTCGAGCCTGCAGCCCAGGCAACTCCCTACCTTTATGGCCCACCGCCGCCTTCACAGCAT
TCCATGTCCGGATCGTCACCCCAACGCATCCAGCCAGTCCACCAGAGCCACACAGGTTCTTCAACCAGGCAGCCA
CGAATTTCTCAGTTGCTCGAGCAGGAACACTCATTAAGCCCGCCATCCAACCAGTATACACCCTCAAACCAGGCC
CCATTGTCCCGCAGTGCATCCCTTGGAGGTACCAGCGCAAGTAACCTGGCTTCGCGCCTTGTCAGGCGCCATAAT
CAACCGGACGATTTGGAAGCCTACAATACTGACAACCAAGGACTATCGGGACCCCGTCAGCAACCCCAACTCTCC
CAAAACACGTTTTACAACCCCAGTGTTGGGTATCAGTCACCATCGATGACAGGGAACGTTTCATCTGGCACGACA
GCAGGCTCAACATCCGATTCCTACTCAGATCTCTACTACAATGGTTCAGCCAGTCAACCACCAAAGAGAATCCAA
GATCCCAACCGTGCCGCCGGTCGATCGCCACACCGAGCCGCCAATCCTACCAATTCAACGGGACTCATAGACGCT
TACGCTCAACAGCAATCGCAATACTCTCCGACAACAGCAACGTACTCGTACGGTCCTGGTCCCCCACAATCGACT
GGTTATCAGACCCACGGTCGCAGCAACTCCCAGGTCAAGCAAGAGCAAGCGACACCCCCTATAGCAAGCCCTTAT
GCACCCCAGAATCAGTCCCACCAAACGCCATCACACTTGGCTGCTCATGCTCCACCTAAGCAGTCGATCTCCAAT
CCGCCAACGCCAATGTCGTACATGCATGGCCCAGGTTCTCATTATTACCCCCAGGACCAGTCGATGATGGTGGAC
CCGCCTCCTAAAAGGCGTGCATCAGGGTTCCGCCGCGTGCGGACGTTGCATGATCTCCAGCCCCGTGTAGAGGCT
AACCCTGGGGGTCGTCGAATGGGGAGTGACGGAACCTATCTTTCGCCTTTGCGGCAACTCACTACAAACATCGTC
GAGACATACCGGATTTGCAACCCCAGCTATCGCTATGAATCGGCTCATAACCCCAGACGGGTTCTCACCAAGCCG
AGCAAACCCGTTCACAATGAAGGGTACGACAACGAGGATTATGATTACATTCTCTACGTCAATGATTGGCTGGGT
ACTGAAGAGGGCCACAAATACCTTATCCTTGATATTCTCGGTCAAGGAACGTTCGGCCAGGTGGTGAAATGCCAG
AACATGAAGACACACGAGATTGTCGCCGTGAAAGTGATCAAGAACAAGCCCGCGTACTTTAACCAGAGTATGATG
GAGGTCACGATCCTAGAGATGCTTAACAAAACCTGCGATCCAAACGACGAACACCACCTTCTTCGACTTCGCGAT
TCATTCATCCATCGAAGTCACCTGTGCCTCGTCTTTGAGCTTCTGTCGTCCAACCTTTACGAGTTGATCAAGCAG
AATCAATTCCAGGGTCTGAGTACGCAACTTGTCAAGGTCTTCATGGCCCAGCTTCTCGACGCCTTGACCGTATTG
AAAGAGGCACGGTTGATACACTGCGATTTGAAGCCTGAAAACATCCTATTGAAATCCCTTCAATCTCCTCAAATC
AAAGTTATCGACTTCGGTTCTGCGTGTCATGAACGGCAAACAGTCTACACCTACATTCAGTCGCGATTCTATCGC
TCACCTGAAGTCCTTTTGGGAATGCCTTACACGGCAGCTATCGACATGTGGTCATTGGGCTGCATTGCCGTCGAG
CTATTCCTTGGTCTACCTCTTTTCCCTGGTACCAGCGAGTACAACCAGCTAACGAGGATAATTGAGATGCTAGGG
ATGCCTCCTTTGAGCATGCTCAATAGCGGCAAGCAAACCAGTCAGTTCTTCGACTCTTTCGATGTCTATAACCCC
CAAACGGGCCAACACGAGAAGAAATATCGCCTCAAGTCCATCGAGCAGTATTCGAGGGAACACAACACCAACGAG
CAGCCCGGGAAGCAATATTTCAAGGCTACATCGTTACCCGAACTAATCAATACGGCGCCCATGCCATCTTCCAAG
TCGTCAAGGTCACAGCATGAGATTGAGAAAGAACTCAATAACCGTGCTGCGTTCATCGACTTCTGCAAAGGCCTC
TTGGATCTGAACCCTGTGACACGATGGACTCCACAGCAAGCGCGACTCCACCCATTCATCACCGGAGAAAAGTTT
ACAAAACCCTTCGTCCCCGAAGGTCTGGCACCTTCACAACCCTCTTCTTCTTCGTCCCCGAACACCCCCGATCCC
AAGCGTCCATACGGCGGTCTCGTTCCGTCTCAGCCGAAGGGCACGCGGGCTTATCAGGACGCGGCCACTTACAAC
CATCATCTCGCTCAGCACCAGGCATATACCGCCCAGCAGGCGTCGCAGGCTGCGAACACTTTCCGAAACCCGTAC
ATCAATCCACCGGCTCAGCAACAGCAATCGCAGCAACAACATCAACAACAGCCACCATCCCAACCCCCTGTAGCA
CAAACGACCTATACAAACCCTCCTGCGGACCCGTACCACCCTCAGTCGCAACAGCAACAGTCTCAGTCACAGCAT
CTCTCCGGCCAGTATGGAAGTGGAGCGGCACAAACTGCTCACCGTGCCCTTGCACACGCGAACTCTGCGAATCAA
TTGGGTTCTGGAGCATCTGGGTCACAATATCCCTCCCATTCGTCCGCCACAAACCTCTCGTCTTCGCATCTAAAC
CCGAATGTGTCGTCTGGTTCTTACTACCCCAATTCTCGCGCTCGGGCCAACACGATCAACCAGATGGATACCATT
CCACCTGCTCTCGCTCGACTGCAACACATGAACCAAGACATAATCGGTGGACGAAATGCATTGACGCCGGTCTTG
AACCGTGATGACGCCATGAAAGAATGGGAGCGACGCCAATCTGGCAAACCTCCTGCTGCTCAACCGTACCCGCAA
TTGGAGTACCTGCAGCAGCAGGCGGAGATCGTAGCTGCGTCTGGCTTGGCCAACTGGGCGAGTGGTCCTCATACA
AGGTACCCGGCGCAACCGTCAAAGTTGCAACACTCGTACCAACCTCATACGATTATGGTTGACGATGAGAACGGG
AATACCTCTAGGAGGGATGTGGTGATGTCCAATGTTCGCGCAGCTGCTGGTGGTGGTGCACGAACCGACCAGCAA
TCGGGGCTTGGCTCATACAGCGGGAGCACTGGAAACCTCATTACGAGTCCACCACAAGCTTACTCCGGTAACACC
GCGGCAGGAAGTCGGTACACGACAAGCTATGGGCAACCACAGCACCCGCCACCGCCAGCATCTTCCAACTCGTTC
GACACGGTAGATCGGCGGACGGATATCGGGATGTACGTGCCTATGCAGCCGGATCAGTACCAAGGCTATCCTGCT
TCGACTTCGACGAACAGGCACGCTCCTCCGGCTGGACCGCCGGTTCCGACATCGTTCTACGGACCTTCGATCGTT
CCTTCAGGATCCCAACAACAGAGGAACCCGTTCAACGTGCAGGAGAACGCGCAGCAGTCTATGGGTCAACCTAAG
GACAACCGCAACTGGCCCCGATAAGTCGCCTAAGCATTGTGAAGGGGATGGATGGGGATATGGACGGAAAGTTCT
TTTGGTGGCGTCCGTTGGGCGGGGGTTTGGGGTCGAGCGAATGCGGCAGCGGTGATTGATTGTGCTCTGTGCGCG
ATTTTGCGATCCTTTATTCTTGTCCTCGTCGGACTTGTTGTTTTCCATTTTATCTCTTTTCCTACCTCGCACCCG
TGTTGTTTTTTCTTCTTCTGTAGAGGCTGCTGCCTTGCCTTTTTATTATATATTTTTCTTCCGACTGATCGCCCA
ACGCTATCACTATTCTCGCCCGCA
Length 4149

Gene

Sequence id CopciAB_138391.T0
Sequence >CopciAB_138391.T0
AGCTTTGGTCCTTGATCATCGACCACAACGCTCCGCTCACCTTCGCCGTCGCCGTCTCCAACGCTCTTGATCCTT
TGTGAACACAAATTACGGTGTCGGGCGCTGGAGTCGTCGTGACTGCGGACTCCTGCTCGCGCCTTTTGCCGCTGA
ACCGCCACCTTTCGCAGGAATATGTCCCAAGCCGACTACATGCAAGACTCTAACGAATCGTCGTTCGACCTTCCT
CGTTGGCAGACCCATGTCGAGCCTGCAGCCCAGGCAACTCCCTACCTTTATGGCCCACCGCCGCCTTCACAGCAT
TCCATGTCCGGATCGTCACCCCAACGCATCCAGCCAGTCCACCAGAGCCACACAGGTTCTTCAACCAGGCAGCCA
CGAATTTCTCAGTTGCTCGAGCAGGAACACTCATTAAGCCCGCCATCCAACCAGTATACACCCTCAAACCAGGCC
CCATTGTCCCGCAGTGCATCCCTTGGAGGTACCAGCGCAAGTAACCTGGCTTCGCGCCTTGTCAGGCGCCATAAT
CAACCGGACGATTTGGAAGCCTACAATACTGACAACCAAGGACTATCGGGACCCCGTCAGCAACCCCAACTCTCC
CAAAACACGTTTTACAACCCCAGTGTTGGGTATCAGTCACCATCGATGACAGGGAACGTTTCATCTGGCACGACA
GCAGGCTCAACATCCGATTCCTACTCAGATCTCTACTACAATGGTTCAGCCAGTCAACCACCAAAGAGAATCCAA
GATCCCAACCGTGCCGCCGGTCGATCGCCACACCGAGCCGCCAATCCTACCAATTCAACGGGACTCATAGACGCT
TACGCTCAACAGCAATCGCAATACTCTCCGACAACAGCAACGTACTCGTACGGTCCTGGTCCCCCACAATCGACT
GGTTATCAGACCCACGGTCGCAGCAACTCCCAGGTCAAGCAAGAGCAAGCGACACCCCCTATAGCAAGCCCTTAT
GCACCCCAGAATCAGTCCCACCAAGTAAGCAATAGCTCGAAGTCTTATCCCATGGATGTATCGACCACCCCTTCC
ATTGTACAGACGCCATCACACTTGGCTGCTCATGCTCCACCTAAGCAGTCGATCTCCAATCCGCCAACGCCAATG
TCGTACATGCATGGCCCAGGTTCTCATTATTACCCCCAGGACCAGTCGATGATGGTGGACCCGCCTCCTAAAAGG
CGTGCATCAGGGTTCCGCCGCGTGCGGACGTTGCATGATCTCCAGCCCCGTGTAGAGGCTAACCCTGGGGGTCGT
CGAATGGGGAGTGACGGAACCTATCTTTCGGCAAGTCTTCCCTACGTTGCGCTTCCATGCGTGTGTACTCACTGC
CCCTCCTTTGTATAGCCTTTGCGGCAACTCACTACAAACATCGTCGAGACATACCGGATTTGCAACCCCAGCTAT
CGCTATGAATCGGCTCATAACCCCAGACGGGTTCTCACCAAGCCGAGCAAACCCGTTCACAATGAAGGGTACGAC
AACGAGGATTATGATTACATTCTCTACGTCAATGATTGGCTGGGTACTGAAGAGGGCCACAAGTGCGTGCGTTTA
TCTCCAACTAATGGCCCTCATTAACGCACCTTTTTCAACGCAGATACCTTATCCTTGATATTCTCGGTCAAGGAA
CGTTCGGCCAGGTGGTGAAATGCCAGAACATGAAGACACACGAGATTGTCGCCGTGAAAGTGATCAAGAACAAGC
CCGCGTACTTTAACCAGAGTATGATGGAGGTCACGATCCTAGAGATGGTGAGTTGAGTCGGATTTCGCACCCGAG
CTTCGCTGACCGGTTCTATAAGCTTAACAAAACCTGCGATCCAAACGACGAACACCACCTTCTTCGACTTCGCGA
TTCATTCATCCATCGAAGTCACCTGTGCCTCGTCTTTGAGCTTCTGTCGTCCAACCTTTACGAGTTGATCAAGCA
GAATCAATTCCAGGGTCTGAGTACGCAACTTGTCAAGGTCTTCATGGCCCAGCTTCTCGACGCCTTGACCGTATT
GAAAGAGGCACGGTTGATACACTGCGATTTGAAGCCTGAAAACATCCTATTGAAATCGTACGCCATTCCATTCTT
ATCTTCGAGATACCACGATGTTGAATACTGTCCTAGCCTTCAATCTCCTCAAATCAAAGTTATCGACTTCGGTTC
TGCGTGTCATGAACGGCAAACAGTCTACACCTACATTCAGTCGCGATTCTATCGCTCACCTGAAGTCCTTTTGGG
AATGCCTTACACGGCAGCTATCGACATGTGGTCATTGGGCTGCATTGCCGTCGAGCTATTCCTTGGTCTACCTCT
TTTCCCTGGTACCAGCGAGTACAACCAGCTAACGAGGATAATTGAGATGCTAGGGTGGGTTTCCTCTACTACAGG
TCACGTTGTCTTGCTAAAGACCATTCGTCAGGATGCCTCCTTTGAGCATGCTCAATAGCGGCAAGCAAACCAGTC
AGTTCTTCGACTCTTTCGATGTCTATAACCCCCAAACGGGCCAACACGAGAAGAAATATCGCCTCAAGTCCATCG
AGCAGTATTCGAGGGAACACAACACCAACGAGCAGCCCGGGAAGCAATATTTCAAGGCTACATCGTTACCCGAAC
TAATCAATACGGCGCCCATGCCATCTTCCAAGTCGTCAAGGTCACAGCATGAGATTGAGAAAGGCGAGTCCTTCT
AGGCACATGTACCCCATGGGATCACATTGATTAACATATTCCTTTGCTAGAACTCAATAACCGTGCTGCGTTCAT
CGACTTCTGCAAAGGCCTCTTGGATCTGAACCCTGTGACACGATGGACTCCACAGCAAGCGCGACTCCACCCATT
CATCACCGGAGAAAAGTTTACAAAACCCTTCGTCGTACGTGCTTCCGTGGCGTTTGGGGTGTCTCTTGTTGATGT
TCTTGTGTAGCCCGAAGGTCTGGCACCTTCACAACCCTCTTCTTCTTCGTCCCCGAACACCCCCGATCCCAAGCG
TCCATACGGCGGTCTCGTTCCGTCTCAGCCGAAGGGCACGCGGGCTTATCAGGACGCGGCCACTTACAACCATCA
TCTCGCTCAGCACCAGGCATATACCGCCCAGCAGGCGTCGCAGGCTGCGAACACTTTCCGAAACCCGTACATCAA
TCCACCGGCTCAGCAACAGCAATCGCAGCAACAACATCAACAACAGCCACCATCCCAACCCCCTGTAGCACAAAC
GACCTATACAAACCCTCCTGCGGACCCGTACCACCCTCAGTCGCAACAGCAACAGTCTCAGTCACAGCATCTCTC
CGGCCAGTATGGAAGTGGAGCGGCACAAACTGCTCACCGTGCCCTTGCACACGCGAACTCTGCGAATCAATTGGG
TTCTGGAGCATCTGGGTCACAATATCCCTCCCATTCGTCCGCCACAAACCTCTCGTCTTCGCATCTAAACCCGAA
TGTGTCGTCTGGTTCTTACTACCCCAATTCTCGCGCTCGGGCCAACACGATCAACCAGATGGATACCATTCCACC
TGCTCTCGCTCGACTGCAACACATGAACCAAGACATAATCGGTGGACGAAATGCATTGACGCCGGTCTTGAACCG
TGATGACGCCATGAAAGAATGGGAGCGACGCCAATCTGGCAAACCTCCTGCTGCTCAACCGTACCCGCAATTGGA
GTACCTGCAGCAGCAGGCGGAGATCGTAGCTGCGTCTGGCTTGGCCAACTGGGCGAGTGGTCCTCATACAAGGTA
CCCGGCGCAACCGTCAAAGTTGCAACACTCGTACCAACCTCATACGATTATGGTTGACGATGAGAACGGGAATAC
CTCTAGGAGGGATGTGGTGATGTCCAATGTTCGCGCAGCTGCTGGTGGTGGTGCACGAACCGACCAGCAATCGGG
GCTTGGCTCATACAGCGGGAGCACTGGAAACCTCATTACGAGTCCACCACAAGCTTACTCCGGTAACACCGCGGC
AGGAAGTCGGTACACGACAAGCTATGGGCAACCACAGCACCCGCCACCGCCAGCATCTTCCAACTCGTTCGACAC
GGTAGATCGGCGGACGGATATCGGGATGTACGTGCCTATGCAGCCGGATCAGTACCAAGGCTATCCTGCTTCGAC
TTCGACGAACAGGCACGCTCCTCCGGCTGGACCGCCGGTTCCGACATCGTTCTACGGACCTTCGATCGTTCCTTC
AGGATCCCAACAACAGAGGAACCCGTTCAACGTGCAGGAGAACGCGCAGCAGTCTATGGGTCAACCTAAGGACAA
CCGCAACTGGCCCCGATAAGTCGCCTAAGCATTGTGAAGGGGATGGATGGGGATATGGACGGAAAGTTCTTTTGG
TGGCGTCCGTTGGGCGGGGGTTTGGGGTCGAGCGAATGCGGCAGCGGTGATTGATTGTGCTCTGTGCGCGATTTT
GCGATCCTTTATTCTTGTCCTCGTCGGACTTGTTGTTTTCCATTTTATCTCTTTTCCTACCTCGCACCCGTGTTG
TTTTTTCTTCTTCTGTAGAGGCTGCTGCCTTGCCTTTTTATTATATATTTTTCTTCCGACTGATCGCCCAACGCT
ATCACTATTCTCGCCCGCA
Length 4594