CopciAB_353910
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_353910 Strain Coprinopsis cinerea Okayama 7
Standard name STE11 Synonyms 353910
Uniprot id Functional description Ras-binding domain of Byr2
Location scaffold_2:1427489..1431631 Strand -
Gene length (nt) 4143 Transcript length (nt) 3877
CDS length (nt) 3525 Protein length (aa) 1174

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Hypsizygus marmoreus strain 51987-8 Hypma_RDB21078 55 0 1211
Agrocybe aegerita Agrae_CAA7271666 55.8 0 1184
Pleurotus eryngii ATCC 90797 Pleery1_1439689 54.8 0 1156
Lentinula edodes NBRC 111202 Lenedo1_1174260 52.3 0 1081
Flammulina velutipes Flave_chr10AA00313 51.3 0 1073
Lentinula edodes W1-26 v1.0 Lentinedodes1_8316 51.7 0 1068
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_68456 51.8 0 1050
Grifola frondosa Grifr_OBZ75595 50.1 2.154E-304 996
Schizophyllum commune H4-8 Schco3_2605129 50.5 1.493E-304 988
Ganoderma sp. 10597 SS1 v1.0 Gansp1_153886 47.7 7.769E-292 974
Auricularia subglabra Aurde3_1_1233708 45.6 6.808E-272 867
Pleurotus ostreatus PC15 PleosPC15_2_1060999 85 1.053E-147 500
Pleurotus ostreatus PC9 PleosPC9_1_44397 83.9 2.038E-134 460
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_64355 81.6 1.741E-132 454
Lentinula edodes B17 Lened_B_1_1_1365 79.7 1.197E-94 338

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 92.5134 1.4125 0.8155
oidia 63.3989 3.0507 1.7613
vegetative_mycelium 61.005 6.7604 3.9031
primordia 47.0227 1.31 0.7563
hyphal_knot 62.1054 5.4723 3.1595
young_fruiting_body 106.2752 12.2806 7.0902
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 116.6893 15.2475 8.8032
Wheat bran 46.668 15.236 8.7965
Horse manure 69.0311 12.861 7.4253
Oak leaves 120.0979 54.4085 31.4128
Hay 61.6686 17.923 10.3479
Corn stalk 77.6941 9.9404 5.7391
Pectine 86.95 1.4163 0.8177
Microcrystalline cellulose 88.0857 16.3748 9.454
Xylose 109.4303 9.8765 5.7022
Cellobiose 96.2242 13.3977 7.7352
Lignin 91.9841 12.7424 7.3568
Apple peels 100.1845 8.1794 4.7224
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 80.0246 2.3936 1.382
Bsubtilis 67.3144 4.7356 2.7341
Ecoli 99.7778 3.4332 1.9822
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 43.7903 4.4542 2.5716
BS 4h 35.9877 5.4676 3.1567
BS 8h 27.2893 2.8011 1.6172
BS 12h 20.7831 3.9029 2.2534
Oidia 0 h 49.0883 17.1407 9.8962
Oidia 18 h 36.6739 5.461 3.1529
Sclerotia 31.3174 2.3708 1.3688
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 17.7774 0.3476 0.2007
DM 36h 22.977 1.9866 1.1469
DM 60h 29.0226 2.6238 1.5149
DM 84h 25.218 4.4293 2.5573
DM 108h 28.8222 2.3152 1.3367
DM 132h 25.4876 1.9838 1.1454
DM 156hAE 40.3563 4.7991 2.7707
ELI1hAE 33.0128 7.0757 4.0851
ELI2hAE 28.1994 1.5218 0.8786
LI2hAE 29.0579 4.9527 2.8594
LI6hAE 31.4894 5.7003 3.2911
LI12hAE 22.3654 5.5528 3.2059
LI18hAE 25.515 1.8919 1.0923
LI 24hAE 43.0193 5.4289 3.1344
DM 156hAM 32.3831 2.1637 1.2492
ELI1hAM 24.0081 2.4754 1.4292
ELI2hAM 21.7459 4.7457 2.7399
LI2hAM 26.2655 3.2298 1.8647
LI6hAM 25.4959 2.145 1.2384
LI12hAM 26.6159 6.545 3.7788
LI18hAM 27.8614 3.6637 2.1152
LI 24hAM 44.627 11.9994 6.9278
LI 24hHK 39.6488 0.8382 0.484
L/D 6h 37.7491 8.8363 5.1016
L/D 12h 39.2618 2.0992 1.212
L/D 18h 42.171 6.1824 3.5694
L/D 24h 34.8823 2.7784 1.6041
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 45.2858 3.1753 1.8333
Hyphal knots 49.2441 13.3499 7.7076
Primordium 1 45.2758 1.0874 0.6278
Primordium 2 44.2084 4.6297 2.6729
Young Fruiting body cap 58.0273 1.5666 0.9045
Younf fruiting body gill 62.7719 20.5876 11.8863
Young fruiting body stipe 76.9694 19.0116 10.9763
Mature fruiting body cap_gill 42.2646 11.1592 6.4428
Mature fruiting body stipe 43.6975 8.1201 4.6881
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 89.2501 4.7863 2.7634
NH4NO3 74.7896 0.7737 0.4467
Proline 81.26 5.4167 3.1273
Tryptophan 67.0807 7.7141 4.4537
Isoleucin 79.8163 7.4739 4.3151
Arginine 100.8097 10.3035 5.9487
Metionine 82.2327 8.3521 4.8221
NaNO3 97.4504 12.4807 7.2058
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 89.2501 4.7863 2.7634
Citrus peel 60.9379 14.4022 8.3151
Poplar leaves 68.0645 16.8004 9.6997
Typha leaves 66.5656 10.2626 5.9251
Overwintered Salix leaves 73.9424 8.0424 4.6433
Reed flowering 71.1673 12.05 6.9571
Tigernut 57.7208 4.3907 2.535
Energy cane 69.4526 1.6074 0.928
Guar gum 60.9445 10.0363 5.7945
Apple peels 65.2095 5.9782 3.4515
Cellobiose 82.4497 6.9158 3.9928
Corn stalk 63.5059 3.571 2.0617
Horse manure 59.9717 11.3724 6.5659
Lignin 64.2127 35.8396 20.692
Microcrystalline cellulose 69.0881 11.0529 6.3814
Oak leaves 56.194 8.7075 5.0273
Pectin esterified 37.9526 4.2347 2.4449
Poplar sawdust 57.8266 4.6473 2.6831
Wheat bran 39.4913 8.155 4.7083
Chlamydomonas reinhardtii 62.4824 5.2996 3.0597
Vertatryl alcohol 44.5947 2.9012 1.675
Furfural 55.5593 11.3915 6.5769
Autoclaved mycelium 72.4272 5.9535 3.4372
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 60.5727 4.7068 2.7175
Ribose 59.4909 3.8918 2.247
Mannose 66.8686 3.2114 2.2708
Fructose 61.4361 1.9488 1.1252
Arabinose 71.1754 3.1463 1.8165
Xylose 67.348 3.6465 2.1053
Galacturonic acid 58.9238 5.0588 2.9207
Rhamnogalacturonan 59.985 1.2396 0.7157
Pectin esterified 55.0631 1.2191 0.7038
Polygalacturonic acid 58.6465 4.2113 2.4314
Sodium acetate 60.8206 4.7081 2.7182
No nitrogen 70.3785 5.6012 3.2339
BSA 60.819 3.565 2.0583
Glutamine 64.0853 6.7601 3.903
No phosphate 68.8736 0.3432 0.1981
No carbon 61.5497 1.9467 1.3765
No sulphur 74.8696 8.0121 4.6258
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 89.2501 4.7863 2.7634
Amylose 48.4864 5.5345 3.1954
Fucose 55.373 7.8229 4.5166
Galactose 56.0144 6.6964 3.8662
Lactose 70.8552 3.5365 2.0418
Maltose 67.1735 12.7255 7.3471
Mannitol 85.4203 8.072 4.6604
Rhamnose 84.0575 18.2038 10.51
Sorbitol 58.3892 6.6923 3.8638
Trehalose 79.8279 15.1741 8.7607
Glycerol 66.8449 9.4645 5.4643
Glucuronic acid 53.6269 2.6271 1.5168
Arabinan 49.6505 3.2315 1.8657
Galactan 61.531 6.7796 3.9142
Galactomannan 58.6579 2.9004 1.6745
Glucan 74.9115 4.0713 2.3506
Xylan 53.0224 5.5859 3.225
Xyloglucan 59.3619 7.0967 4.0973
Arabinogalactan 59.756 4.7942 2.7679
Pectin 71.1356 32.9384 19.017
Rhamnogalacturonan 105.6121 28.6633 16.5488
Polygalacturonic acid 75.2752 4.1456 2.3935
Mannan 61.3364 3.2999 1.9052
Amylopectin 57.5007 15.8445 9.1478
Inulin 50.3862 4.1872 2.4175
BSA 100.1584 9.4978 5.4835
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 29.0226 2.6238 1.5149
2h WAT 22.536 1.4135 0.8161
4h WAT 21.5011 0.3908 0.2257
8h WAT 19.3384 1.585 0.9151
16h WAT 24.1807 5.5292 3.1923
24h WAT 23.0613 3.2091 1.8527
WAT hyphal knot -30h 20.1932 1.5026 0.8675
WAT hyphal knot -22h 20.3428 4.694 2.7101
WAT hyphal knot -15h 19.9568 0.1494 0.0862
WAT hyphal knot -7.5h 17.8318 2.2493 1.2987
WAT hyphal knot 21.7051 1.1539 0.6662
WAT hyphal knot +7.5h 26.4912 6.2492 3.608
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 83.1848 37.2574 21.5106
Straw 3h 50.0068 18.8515 10.8839
Straw 6h 45.5395 7.2421 4.1812
Straw 12h 57.495 2.2676 1.3092
Straw 24h 48.8147 14.7202 8.4987
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 28.5034 1.5749 0.9093
Frost (-20C, 30min) 21.7964 1.0309 0.5952
Heat shock (47C, 2h) 56.1784 7.9391 4.5836
High CO2 28.7567 1.9997 1.1545
Drought (4% agar, 12h) 21.0737 0.8314 0.48
Oxidative (1mM H2O2, 3h) 21.5454 2.0043 1.1572
Acidic (pH4, 3h) 29.3798 4.5291 2.6149
Alkaline (pH9, 3h) 20.8857 2.4079 1.3902
Osmotic (sorbitol 2h) 14.7341 0.8473 0.4892
CongoRed (3h) 21.3498 2.7751 1.6022
Cobalt chloride control 22.8368 2.0197 1.1661
Cobalt chloride 2mM 25.1358 2.3513 1.3575
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 24.3916 3.5101 2.0266
Cold stimulation 16.5282 7.2205 4.1688
Scratched surface 18.0366 1.5915 0.9188
Ca2+, 200mM, 24h 19.3902 1.3633 0.7871
Cu2+, 2mM, 6h 18.0446 3.4148 1.9715
Voriconazole 18.1495 7.9776 4.6059
Trichoderma interaction, early 19.8431 2.0086 1.1597
Trichoderma interaction 60h 11.9571 4.0187 2.3202
Cobalt chloride 2mM repeat 22.083 5.3694 3.1
Hypoxia 24.8126 4.4209 2.5524
Hypoxia control 19.0715 2.6626 1.5373
Protoplastation control 16.5523 0.412 0.2914
Protoplastation 3.5h 37.4009 10.164 7.1871
Protoplastation 1.5h 29.5231 15.6828 11.0894

General data

Systematic name STE11
Protein id CopciAB_353910.T0
Description Ras-binding domain of Byr2

Annotation summary

0 300 600 900 1174

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd09534 SAM_Ste11_fungal - 81 142
Pfam PF00536 SAM domain (Sterile alpha motif) IPR001660 80 141
Pfam PF14847 Ras-binding domain of Byr2 IPR029458 424 522
Pfam PF00069 Protein kinase domain IPR000719 881 1142

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR001660 Sterile alpha motif domain
IPR011009 Protein kinase-like domain superfamily
IPR029458 Ras-binding domain of Byr2
IPR013761 Sterile alpha motif/pointed domain superfamily
IPR000719 Protein kinase domain
IPR017441 Protein kinase, ATP binding site
IPR008271 Serine/threonine-protein kinase, active site

GO

Go id Term Ontology
GO:0005515 protein binding MF
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP

KEGG

KEGG Orthology
K11228

EggNOG

COG category Description
T Ras-binding domain of Byr2

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_353910 across fungi.

Arrow shows the origin of gene family containing CopciAB_353910.

Protein

Sequence id CopciAB_353910.T0
Sequence >CopciAB_353910.T0
MSALAAPSSFMNSDSLSSQSPPKPSSPIVVSPPYSTNRQPTRPFKNMGSVDLRGQLPFPTGPTISLDPPPGTTFA
ESLKAWTDNHVARWLSDMKCGMHAEVFRINDIRGDVLLELDQDTLKEMNIVSIGDRIRILNAVKLLRQRAAARTP
SPIHVTRPTASHTRTGSENLSLEQGVASGRGHSRKESTRPPPITIHPNANKGDLPDLIREPPPDSASGRSMMAPP
PVRPLPVPQNATPTASQVSTPGGSHRPNLPPLPPPPRGQPPPPPTTNRTPNRWNSSASEAPSQPLPPTPQNQGLL
TPSNGSTWDSRSKPSRSTSPLPPPRGVRGPVAKASGAGVASPNNSPARRLGGHPYAMPSVQATLHPPTGLQNPNL
SPIDEHFAAAGQNSSSTSTPSPPSQPYRSYTPANAYNTPSLDDIRKKIVKFVIPEEGTSYMIDVTNCSSGQEVIE
KVLKKIGKGGFRGIDNDGHGDRDDGSLNVDGWAVYLASGEESPSEPLTETQLLNICNAPDHPARERGLAVRRLRR
QEDRSGSPLARNLQPPTQPTSKATKRASSISILSGLGVRNPDKVLGDPPSPSNEAPSPPPPPLWQSGAGNAKRPS
KLRNFFGQRPPSELITDHLPEFFPMAEKKVLRTARHSILLRSGTLKRQSALSGGSIQLPPPPPLPSRFSTSTQGS
GCRRSMSPGRASITSLPPPPLPEKDEGEPIPRMSLSTDDGHSIDLHSDDDDDDIPLSASVAPRLLPPIETGSFSQ
SMEEITGSRPASRATSIGSKRLSFMSELRSKRDRSDTASMMTVDEITAEVESRRVSKMPDMSNANDLEGWTKVEN
AASFDTAPTVPADEVEVDDDEATLATEDDEDEDEDDSDDDFGIAIPTRTNNKWIKGALIGAGSFGKVYLGMDASN
GLLMAVKQVELPQGDGPSQERKKSMLSALEREIELLKVLQHENIVQYLYSSSDDEYLNIFLEYVPGGSVATLLSN
YGAFEEPLVRNFVRQILQGLSYLHERDIIHRDIKGANILVDNKGGVKISDFGISKKVDDNLLGGNRLHRPSLQGS
VFWMAPEVVKQTGHTKKADIWSVGCLVVEMLTGEHPWAQLTQMQAIFKIGSSARPTIPSDISAEAQDFLQKTFEI
NHELRPHAAELLQHPWLSKKGKKAAAAAAAAAAAASASAASSTNDSPSS
Length 1174

Coding

Sequence id CopciAB_353910.T0
Sequence >CopciAB_353910.T0
ATGTCCGCTCTGGCAGCACCCTCCTCTTTCATGAACTCAGATTCGTTGTCGTCCCAATCGCCGCCAAAGCCATCG
TCGCCGATAGTGGTATCACCTCCCTACTCGACAAACCGACAGCCTACACGACCATTTAAGAATATGGGCAGTGTC
GACCTCCGTGGCCAACTGCCTTTCCCAACTGGACCGACCATCTCACTTGATCCACCACCGGGCACAACCTTCGCG
GAATCCCTAAAAGCATGGACGGACAACCATGTTGCCCGCTGGTTATCCGATATGAAATGCGGAATGCATGCAGAA
GTATTTCGTATCAACGACATTCGCGGCGATGTTCTCCTCGAATTGGATCAAGATACACTCAAGGAAATGAATATC
GTGAGCATTGGCGATCGCATTCGCATTTTGAACGCCGTCAAGCTCCTTCGCCAACGTGCAGCAGCGAGAACACCC
TCTCCTATCCACGTTACCCGCCCCACGGCCTCCCATACCCGCACTGGCTCAGAGAACCTCAGCCTGGAACAAGGT
GTCGCCTCTGGTCGCGGTCACTCGCGGAAAGAATCGACTCGACCACCTCCTATTACCATCCACCCCAATGCGAAC
AAGGGGGATCTACCTGATCTTATTCGAGAGCCTCCACCAGACTCGGCATCTGGGCGGTCGATGATGGCTCCACCA
CCTGTGCGACCTCTGCCAGTCCCTCAGAATGCAACCCCAACAGCATCTCAGGTCTCCACTCCAGGTGGGAGTCAT
CGTCCCAATCTCCCACCACTTCCTCCTCCCCCACGCGGCCAACCACCCCCACCCCCGACCACAAACCGCACTCCC
AATCGCTGGAACTCCTCCGCTTCCGAAGCACCATCCCAACCTTTGCCTCCTACCCCTCAGAACCAGGGATTACTC
ACGCCCTCAAACGGATCTACATGGGATTCACGCTCCAAACCCTCCAGATCAACGTCTCCGTTGCCGCCGCCTCGG
GGTGTGCGAGGACCTGTTGCCAAAGCCTCTGGAGCAGGAGTTGCATCCCCGAACAACAGCCCAGCCAGGAGACTG
GGCGGACACCCTTACGCAATGCCTAGTGTACAGGCTACACTGCATCCACCGACAGGTCTACAGAACCCCAACCTT
TCACCTATAGATGAACATTTCGCGGCAGCAGGCCAGAACAGTTCATCAACCAGCACACCATCACCGCCGTCTCAA
CCCTACAGATCCTACACACCCGCAAATGCCTACAACACTCCAAGCCTAGATGACATCCGGAAGAAGATTGTCAAG
TTCGTTATTCCCGAGGAAGGAACATCATACATGATTGATGTCACCAACTGCTCCAGCGGTCAAGAGGTCATCGAG
AAAGTACTGAAGAAGATTGGAAAGGGAGGCTTTAGGGGGATTGATAACGACGGCCATGGTGACCGGGATGATGGT
AGTCTGAACGTCGATGGCTGGGCCGTATACCTTGCATCCGGGGAAGAGTCACCTTCGGAACCGCTGACCGAAACC
CAACTTCTAAATATCTGCAACGCTCCAGACCACCCTGCACGAGAACGGGGACTTGCTGTGCGCAGGCTACGCCGA
CAAGAGGACAGAAGCGGAAGCCCGCTTGCAAGGAATCTCCAACCACCGACACAACCAACCAGCAAAGCAACTAAG
CGCGCTAGCTCTATCAGTATTCTCAGTGGCCTCGGAGTTCGCAATCCAGACAAAGTCCTCGGCGACCCACCCTCA
CCCAGCAACGAAGCTCCAAGTCCTCCCCCTCCTCCCCTCTGGCAAAGCGGTGCCGGCAATGCCAAGCGACCGTCA
AAGCTGCGCAACTTCTTTGGTCAACGACCCCCCAGCGAGCTCATCACCGACCATCTTCCCGAATTCTTTCCTATG
GCGGAAAAGAAAGTGCTGCGTACAGCTCGACACAGTATTCTATTGCGTTCTGGAACTCTGAAACGGCAGAGTGCC
TTGTCAGGCGGTTCGATTCAACTTCCACCACCGCCACCGTTACCCTCAAGGTTTAGCACCAGCACACAAGGCTCG
GGTTGCAGACGCTCGATGTCCCCAGGCAGGGCGTCTATTACCTCACTGCCACCCCCTCCGCTTCCAGAAAAAGAT
GAAGGGGAACCAATACCTCGAATGTCACTCTCCACCGACGATGGACATTCTATCGACCTTCATTCCGACGACGAC
GACGACGACATTCCTCTTTCCGCTTCCGTAGCCCCTCGGCTTCTGCCTCCCATCGAAACTGGTTCGTTCTCTCAA
TCCATGGAGGAAATCACAGGAAGTAGGCCCGCTTCGAGAGCCACGTCCATAGGCTCCAAGCGACTTAGCTTCATG
TCTGAACTCCGAAGCAAACGAGATCGATCTGACACTGCAAGTATGATGACCGTGGATGAGATCACAGCGGAGGTG
GAGAGTAGGAGGGTGAGCAAGATGCCAGATATGTCAAACGCGAATGATCTGGAGGGGTGGACGAAGGTAGAGAAT
GCGGCTAGCTTTGATACCGCTCCTACGGTCCCTGCTGATGAGGTCGAGGTTGATGATGATGAGGCTACCTTGGCC
ACAGAAGACGATGAGGATGAGGACGAGGATGATTCCGACGATGACTTTGGTATTGCAATCCCAACACGGACGAAC
AACAAATGGATCAAGGGTGCATTGATTGGCGCTGGGTCATTTGGAAAAGTCTATTTGGGGATGGATGCGTCCAAT
GGTCTCCTCATGGCTGTCAAGCAAGTCGAACTTCCCCAGGGCGACGGTCCTAGCCAGGAACGCAAGAAGAGCATG
CTAAGCGCCCTCGAAAGAGAGATTGAACTCTTGAAGGTCCTTCAACACGAAAACATTGTCCAATATCTCTACTCT
TCTAGTGACGATGAGTACCTCAATATTTTCCTGGAATACGTCCCCGGTGGATCGGTCGCCACTCTCCTCTCGAAT
TACGGCGCTTTCGAAGAACCTTTGGTTCGGAACTTTGTTCGGCAAATCCTTCAGGGTCTCAGCTACCTTCACGAA
CGTGATATCATTCATCGAGACATCAAGGGTGCTAACATTCTGGTTGATAACAAAGGAGGAGTCAAGATTTCCGAC
TTTGGTATCTCCAAGAAGGTCGACGATAATCTACTGGGTGGAAATCGGCTACACAGACCGTCATTGCAAGGATCG
GTCTTCTGGATGGCGCCTGAAGTCGTCAAGCAAACCGGGCACACGAAGAAGGCTGACATTTGGAGTGTCGGATGC
CTTGTTGTCGAGATGTTGACCGGTGAACATCCTTGGGCGCAACTGACTCAGATGCAAGCCATATTCAAGATCGGC
TCTTCCGCAAGACCGACTATTCCTTCTGATATCTCTGCTGAGGCACAAGATTTCCTTCAGAAGACATTTGAAATC
AACCACGAGCTTCGACCTCATGCTGCCGAACTTCTTCAGCACCCCTGGCTGTCCAAGAAGGGTAAAAAAGCAGCA
GCGGCAGCAGCTGCCGCCGCCGCCGCCGCCAGCGCCAGCGCAGCCTCCTCCACTAATGATTCGCCTTCATCGTGA
Length 3525

Transcript

Sequence id CopciAB_353910.T0
Sequence >CopciAB_353910.T0
AGCGTACTCGCCCTCTGCTCGTCGTCGATCCCGTCGTCCTCGTCCCCGTTCCCAAGTCACATGTCAGCCTGAACA
GCCTGGAGAACATTTACATTACTTGCTAACGACCTGGTGCTCGCCCAATGTCCGCTCTGGCAGCACCCTCCTCTT
TCATGAACTCAGATTCGTTGTCGTCCCAATCGCCGCCAAAGCCATCGTCGCCGATAGTGGTATCACCTCCCTACT
CGACAAACCGACAGCCTACACGACCATTTAAGAATATGGGCAGTGTCGACCTCCGTGGCCAACTGCCTTTCCCAA
CTGGACCGACCATCTCACTTGATCCACCACCGGGCACAACCTTCGCGGAATCCCTAAAAGCATGGACGGACAACC
ATGTTGCCCGCTGGTTATCCGATATGAAATGCGGAATGCATGCAGAAGTATTTCGTATCAACGACATTCGCGGCG
ATGTTCTCCTCGAATTGGATCAAGATACACTCAAGGAAATGAATATCGTGAGCATTGGCGATCGCATTCGCATTT
TGAACGCCGTCAAGCTCCTTCGCCAACGTGCAGCAGCGAGAACACCCTCTCCTATCCACGTTACCCGCCCCACGG
CCTCCCATACCCGCACTGGCTCAGAGAACCTCAGCCTGGAACAAGGTGTCGCCTCTGGTCGCGGTCACTCGCGGA
AAGAATCGACTCGACCACCTCCTATTACCATCCACCCCAATGCGAACAAGGGGGATCTACCTGATCTTATTCGAG
AGCCTCCACCAGACTCGGCATCTGGGCGGTCGATGATGGCTCCACCACCTGTGCGACCTCTGCCAGTCCCTCAGA
ATGCAACCCCAACAGCATCTCAGGTCTCCACTCCAGGTGGGAGTCATCGTCCCAATCTCCCACCACTTCCTCCTC
CCCCACGCGGCCAACCACCCCCACCCCCGACCACAAACCGCACTCCCAATCGCTGGAACTCCTCCGCTTCCGAAG
CACCATCCCAACCTTTGCCTCCTACCCCTCAGAACCAGGGATTACTCACGCCCTCAAACGGATCTACATGGGATT
CACGCTCCAAACCCTCCAGATCAACGTCTCCGTTGCCGCCGCCTCGGGGTGTGCGAGGACCTGTTGCCAAAGCCT
CTGGAGCAGGAGTTGCATCCCCGAACAACAGCCCAGCCAGGAGACTGGGCGGACACCCTTACGCAATGCCTAGTG
TACAGGCTACACTGCATCCACCGACAGGTCTACAGAACCCCAACCTTTCACCTATAGATGAACATTTCGCGGCAG
CAGGCCAGAACAGTTCATCAACCAGCACACCATCACCGCCGTCTCAACCCTACAGATCCTACACACCCGCAAATG
CCTACAACACTCCAAGCCTAGATGACATCCGGAAGAAGATTGTCAAGTTCGTTATTCCCGAGGAAGGAACATCAT
ACATGATTGATGTCACCAACTGCTCCAGCGGTCAAGAGGTCATCGAGAAAGTACTGAAGAAGATTGGAAAGGGAG
GCTTTAGGGGGATTGATAACGACGGCCATGGTGACCGGGATGATGGTAGTCTGAACGTCGATGGCTGGGCCGTAT
ACCTTGCATCCGGGGAAGAGTCACCTTCGGAACCGCTGACCGAAACCCAACTTCTAAATATCTGCAACGCTCCAG
ACCACCCTGCACGAGAACGGGGACTTGCTGTGCGCAGGCTACGCCGACAAGAGGACAGAAGCGGAAGCCCGCTTG
CAAGGAATCTCCAACCACCGACACAACCAACCAGCAAAGCAACTAAGCGCGCTAGCTCTATCAGTATTCTCAGTG
GCCTCGGAGTTCGCAATCCAGACAAAGTCCTCGGCGACCCACCCTCACCCAGCAACGAAGCTCCAAGTCCTCCCC
CTCCTCCCCTCTGGCAAAGCGGTGCCGGCAATGCCAAGCGACCGTCAAAGCTGCGCAACTTCTTTGGTCAACGAC
CCCCCAGCGAGCTCATCACCGACCATCTTCCCGAATTCTTTCCTATGGCGGAAAAGAAAGTGCTGCGTACAGCTC
GACACAGTATTCTATTGCGTTCTGGAACTCTGAAACGGCAGAGTGCCTTGTCAGGCGGTTCGATTCAACTTCCAC
CACCGCCACCGTTACCCTCAAGGTTTAGCACCAGCACACAAGGCTCGGGTTGCAGACGCTCGATGTCCCCAGGCA
GGGCGTCTATTACCTCACTGCCACCCCCTCCGCTTCCAGAAAAAGATGAAGGGGAACCAATACCTCGAATGTCAC
TCTCCACCGACGATGGACATTCTATCGACCTTCATTCCGACGACGACGACGACGACATTCCTCTTTCCGCTTCCG
TAGCCCCTCGGCTTCTGCCTCCCATCGAAACTGGTTCGTTCTCTCAATCCATGGAGGAAATCACAGGAAGTAGGC
CCGCTTCGAGAGCCACGTCCATAGGCTCCAAGCGACTTAGCTTCATGTCTGAACTCCGAAGCAAACGAGATCGAT
CTGACACTGCAAGTATGATGACCGTGGATGAGATCACAGCGGAGGTGGAGAGTAGGAGGGTGAGCAAGATGCCAG
ATATGTCAAACGCGAATGATCTGGAGGGGTGGACGAAGGTAGAGAATGCGGCTAGCTTTGATACCGCTCCTACGG
TCCCTGCTGATGAGGTCGAGGTTGATGATGATGAGGCTACCTTGGCCACAGAAGACGATGAGGATGAGGACGAGG
ATGATTCCGACGATGACTTTGGTATTGCAATCCCAACACGGACGAACAACAAATGGATCAAGGGTGCATTGATTG
GCGCTGGGTCATTTGGAAAAGTCTATTTGGGGATGGATGCGTCCAATGGTCTCCTCATGGCTGTCAAGCAAGTCG
AACTTCCCCAGGGCGACGGTCCTAGCCAGGAACGCAAGAAGAGCATGCTAAGCGCCCTCGAAAGAGAGATTGAAC
TCTTGAAGGTCCTTCAACACGAAAACATTGTCCAATATCTCTACTCTTCTAGTGACGATGAGTACCTCAATATTT
TCCTGGAATACGTCCCCGGTGGATCGGTCGCCACTCTCCTCTCGAATTACGGCGCTTTCGAAGAACCTTTGGTTC
GGAACTTTGTTCGGCAAATCCTTCAGGGTCTCAGCTACCTTCACGAACGTGATATCATTCATCGAGACATCAAGG
GTGCTAACATTCTGGTTGATAACAAAGGAGGAGTCAAGATTTCCGACTTTGGTATCTCCAAGAAGGTCGACGATA
ATCTACTGGGTGGAAATCGGCTACACAGACCGTCATTGCAAGGATCGGTCTTCTGGATGGCGCCTGAAGTCGTCA
AGCAAACCGGGCACACGAAGAAGGCTGACATTTGGAGTGTCGGATGCCTTGTTGTCGAGATGTTGACCGGTGAAC
ATCCTTGGGCGCAACTGACTCAGATGCAAGCCATATTCAAGATCGGCTCTTCCGCAAGACCGACTATTCCTTCTG
ATATCTCTGCTGAGGCACAAGATTTCCTTCAGAAGACATTTGAAATCAACCACGAGCTTCGACCTCATGCTGCCG
AACTTCTTCAGCACCCCTGGCTGTCCAAGAAGGGTAAAAAAGCAGCAGCGGCAGCAGCTGCCGCCGCCGCCGCCG
CCAGCGCCAGCGCAGCCTCCTCCACTAATGATTCGCCTTCATCGTGACGAGCACTCCTATACCCCCTTTCGTTCT
GGGTTCTTATCTTGTTCCATGTAAGTTATTATCTTTGGTTGTTTTTGTTACACGGGATTCCGCACATGTCTGTAT
TCTATCCACCGCACACGTCCTCATCGCTGTTTTCGAGATGCTATGTATTTCAAACCCCATCTGTCTCAATCCATA
CTATTAGTCTAGTGCTGTTGTCCCGTAGGTTCCAATAGTAGCCATTACTAGG
Length 3877

Gene

Sequence id CopciAB_353910.T0
Sequence >CopciAB_353910.T0
AGCGTACTCGCCCTCTGCTCGTCGTCGATCCCGTCGTCCTCGTCCCCGTTCCCAAGTCACATGTCAGCCTGAACA
GCCTGGAGAACATTTACATTACTTGCTAACGACCTGGTGCTCGCCCAATGTCCGCTCTGGCAGCACCCTCCTCTT
TCATGAACTCAGATTCGTTGTCGTCCCAATCGCCGCCAAAGCCATCGTCGCCGATAGTGGTATCACCTCCCTACT
CGACAAACCGACAGCCTACACGACCATTTAAGAATATGGGCAGTGTCGACCTCCGTGGCCAACTGCCTTTCCCAA
CTGGACCGACCATCTCACTTGATCCACCACCGGGCACAACCTTCGCGGAATCCCTAAAAGCATGGACGGACAACC
ATGTTGCCCGCTGGTTATCCGATATGAAATGCGGAATGCATGCAGAAGTATTTCGTATCAACGACATTCGCGGCG
ATGTTCTCCTCGAATTGGATCAAGATACACTCAAGGAAATGAATATCGTGAGCATTGGCGATCGCATTCGCATTT
TGAACGCCGTCAAGCTCCTTCGCCAACGTGCAGCAGCGAGAACACCCTCTCCTATCCACGTTACCCGCCCCACGG
CCTCCCATACCCGCACTGGCTCAGAGAACCTCAGCCTGGAACAAGGTGTCGCCTCTGGTCGCGGTCACTCGCGGA
AAGAATCGACTCGACCACCTCCTATTACCATCCACCCCAATGCGAACAAGGGGGATCTACCTGATCTTATTCGAG
AGCCTCCACCAGACTCGGCATCTGGGCGGTCGATGATGGCTCCACCACCTGTGCGACCTCTGCCAGTCCCTCAGA
ATGCAACCCCAACAGCATCTCAGGTCTCCACTCCAGGTGGGAGTCATCGTCCCAATCTCCCACCACTTCCTCCTC
CCCCACGCGGCCAACCACCCCCACCCCCGACCACAAACCGCACTCCCAATCGCTGGAACTCCTCCGCTTCCGAAG
CACCATCCCAACCTTTGCCTCCTACCCCTCAGAACCAGGGATTACTCACGCCCTCAAACGGATCTACATGGGATT
CACGCTCCAAACCCTCCAGATCAACGTCTCCGTTGCCGCCGCCTCGGGGTGTGCGAGGACCTGTTGCCAAAGCCT
CTGGAGCAGGAGTTGCATCCCCGAACAACAGCCCAGCCAGGAGACTGGGCGGACACCCTTACGCAATGCCTAGTG
TACAGGCTACACTGCATCCACCGACAGGTCTACAGAACCCCAACCTTTCACCTATAGATGAACATTTCGCGGCAG
CAGGCCAGAACAGTTCATCAACCAGCACACCATCACCGCCGTCTCAACCCTACAGATCCTACACACCCGCAAATG
CCTACAACACTCCAAGCCTAGATGACATCCGGAAGAAGATTGTCAAGTTCGTTATTCCCGAGGAAGGAACATCAT
ACATGATTGATGTCACCAACTGCTCCAGCGGTCAAGAGGTCATCGAGAAAGTACTGAAGAAGATTGGAAAGGGAG
GCTTTAGGGGGATTGATAACGACGGCCATGGTGACCGGGATGATGGTAGTCTGAACGTCGATGGCTGGGCCGTAT
ACCTTGCATCCGGGGAAGAGTCACCTTGTAAGTCGGTCTAGATGCTATATGCCAATCTCAACTAACTCTTTCCCA
GCGGAACCGCTGACCGAAACCCAACTTCTAAATATCTGCAACGCTCCAGACCACCCTGCACGAGAACGGGGACTT
GCTGTGCGCAGGCTACGCCGACAAGAGGACAGAAGCGGAAGCCCGCTTGCAAGGAATCTCCAACCACCGACACAA
CCAACCAGCAAAGCAACTAAGCGCGCTAGCTCTATCAGTATTCTCAGTGGCCTCGGAGTTCGCAATCCAGACAAA
GTCCTCGGCGACCCACCCTCACCCAGCAACGAAGCTCCAAGTCCTCCCCCTCCTCCCCTCTGGCAAAGCGGTGCC
GGCAATGCCAAGCGACCGTCAAAGCTGCGCAACTTCTTTGGTCAACGACCCCCCAGCGAGCTCATCACCGACCAT
CTTCCCGAATTCTTTCCTATGGCGGAAAAGAAAGTGCTGCGTACAGCTCGACACAGTATTCTATTGCGTTCTGGA
ACTCTGAAACGGCAGAGTGCCTTGTCAGGCGGTTCGATTCAACTTCCACCACCGCCACCGTTACCCTCAAGGTTT
AGCACCAGCACACAAGGCTCGGGTTGCAGACGCTCGATGTCCCCAGGCAGGGCGTCTATTACCTCACTGCCACCC
CCTCCGCTTCCAGAAAAAGATGAAGGGGAACCAATACCTCGAATGTCACTCTCCACCGACGATGGACATTCTATC
GACCTTCATTCCGACGACGACGACGACGACATTCCTCTTTCCGCTTCCGTAGCCCCTCGGCTTCTGCCTCCCATC
GAAACTGGTTCGTTCTCTCAATCCATGGAGGAAATCACAGGAAGTAGGCCCGCTTCGAGAGCCACGTCCATAGGC
TCCAAGCGACTTAGCTTCATGTCTGAACTCCGAAGCAAACGAGATCGATCTGACACTGCAAGTATGATGACCGTG
GATGAGATCACAGCGGAGGTGGAGAGTAGGAGGGTGAGCAAGATGCCAGATATGTCAAACGCGAATGATCTGGAG
GGGTGGACGAAGGTAGAGAATGCGGCTAGCTTTGATACCGCTCCTACGGTCCCTGCTGATGAGGTCGAGGTTGAT
GATGATGAGGCTACCTTGGCCACAGAAGACGATGAGGATGAGGACGAGGATGATTCCGACGATGACTTTGGTATT
GCAATCCCAACACGGACGAGTAAGCATTATTACTGCCAAGTGCCAATCTTCGCTCGGTACTAACTGCTTTTCTAG
ACAACAAATGGATCAAGGGTGCATTGATTGGCGCTGGGTCATTTGGAAAAGTCTATTTGGGGATGGATGCGTCCA
ATGGTCTCCTCATGGCTGTCAAGCAAGTCGAACTTCCCCAGGGCGACGGTCCTAGCCAGGAACGCAAGAAGAGCA
TGCTAAGCGCCCTCGAAAGAGAGATTGAACTCTTGAAGGTCCTTCAACACGAAAACATTGTCCAATATCTCTGTA
AGTCGCTTCAATTCGGGAATGCCATCCATGCTAACGCAGTTTGTAGACTCTTCTAGTGACGATGAGTACCTCAAT
ATTTTCCTGGAATACGTCCCCGGTGGATCGGTCGCCACTCTCCTCTCGAATTACGGCGCTTTCGAAGAACCTTTG
GTTCGGAACTTTGTTCGGCAAATCCTTCAGGGTCTCAGCTACCTTCACGAACGTGATATCATTCATCGAGACATC
AAGGGTGCTAACATTCTGGTTGATAACAAAGGAGGAGTCAAGATTTCCGACTTTGGTATCTCCAAGAAGGTCGAC
GATAGTGAGTTACCCTGGTTGTGATGGTCTGTAACGTGGTAAACTGATGATCTCTACGTAGATCTACTGGGTGGA
AATCGGCTACACAGACCGTCATTGCAAGGATCGGTCTTCTGGATGGCGCCTGAAGTCGTCAAGCAAACCGGGCAC
ACGAAGAAGGCTGACATTTGGAGTGTCGGATGCCTTGTTGTCGAGATGTTGACCGGTGAACATCCTTGGGCGCAA
CTGACTCAGATGCAAGCCATATTCAAGGTAACTATGGATTAAGCAGCTGTCGGGATTAGATGCTTACCGTTGCTA
TTCTTAGATCGGCTCTTCCGCAAGACCGACTATTCCTTCTGATATCTCTGCTGAGGCACAAGATTTCCTTCAGAA
GACATTTGAAATCAACCACGAGCTTCGACCTCATGCTGCCGAACTTCTTCAGCACCCCTGGCTGTCCAAGAAGGG
TAAAAAAGCAGCAGCGGCAGCAGCTGCCGCCGCCGCCGCCGCCAGCGCCAGCGCAGCCTCCTCCACTAATGATTC
GCCTTCATCGTGACGAGCACTCCTATACCCCCTTTCGTTCTGGGTTCTTATCTTGTTCCATGTAAGTTATTATCT
TTGGTTGTTTTTGTTACACGGGATTCCGCACATGTCTGTATTCTATCCACCGCACACGTCCTCATCGCTGTTTTC
GAGATGCTATGTATTTCAAACCCCATCTGTCTCAATCCATACTATTAGTCTAGTGCTGTTGTCCCGTAGGTTCCA
ATAGTAGCCATTACTAGG
Length 4143