Systematic name | CopciAB_376354 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | NAG1 | Synonyms | 376354 |
Uniprot id | Functional description | Glycoside hydrolase family 20 protein | |
Location | scaffold_7:859646..861914 | Strand | - |
Gene length (nt) | 2269 | Transcript length (nt) | 1830 |
CDS length (nt) | 1665 | Protein length (aa) | 554 |
Strain name | Gene / Protein name |
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Aspergillus nidulans | AN1502_nagA |
Strain name | Gene / Protein name | Pident | E-value | Bits |
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Hypsizygus marmoreus strain 51987-8 | Hypma_RDB14630 | 71.8 | 1.177E-277 | 852 |
Agrocybe aegerita | Agrae_CAA7261537 | 67.6 | 2.312E-259 | 799 |
Agaricus bisporus var. burnettii JB137-S8 | Agabi_varbur_1_120598 | 66.8 | 2.425E-255 | 787 |
Pleurotus eryngii ATCC 90797 | Pleery1_1526800 | 65 | 3.427E-245 | 758 |
Agaricus bisporus var bisporus (H97) | Agabi_varbisH97_2_186352 | 64.5 | 5.581E-245 | 757 |
Ganoderma sp. 10597 SS1 v1.0 | Gansp1_116762 | 64.1 | 1.07E-239 | 742 |
Pleurotus ostreatus PC15 | PleosPC15_2_1094009 | 63 | 1.188E-237 | 736 |
Lentinula edodes W1-26 v1.0 | Lentinedodes1_13165 | 62.2 | 6.766E-237 | 734 |
Lentinula edodes NBRC 111202 | Lenedo1_1052620 | 61.6 | 3.656E-235 | 729 |
Flammulina velutipes | Flave_chr06AA00028 | 60.3 | 2.786E-228 | 709 |
Grifola frondosa | Grifr_OBZ71292 | 61.8 | 3.489E-216 | 674 |
Lentinula edodes B17 | Lened_B_1_1_3886 | 59.9 | 3.279E-215 | 671 |
Auricularia subglabra | Aurde3_1_1302918 | 57 | 4.629E-210 | 657 |
Pleurotus ostreatus PC9 | PleosPC9_1_87509 | 69 | 9.586E-174 | 551 |
Schizophyllum commune H4-8 | Schco3_66483 | 59.6 | 8.44E-149 | 479 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | NAG1 |
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Protein id | CopciAB_376354.T0 |
Description | Glycoside hydrolase family 20 protein |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
---|---|---|---|---|---|
CDD | cd06562 | GH20_HexA_HexB-like | - | 177 | 532 |
Pfam | PF14845 | beta-acetyl hexosaminidase like | IPR029019 | 20 | 154 |
Pfam | PF00728 | Glycosyl hydrolase family 20, catalytic domain | IPR015883 | 177 | 509 |
Prediction | Start | End | Score |
---|---|---|---|
SP(Sec/SPI) | 1 | 19 | 0.9839 |
Domain n | Start | End | Length |
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No records |
Accession | Description |
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IPR017853 | Glycoside hydrolase superfamily |
IPR025705 | Beta-hexosaminidase |
IPR015883 | Glycoside hydrolase family 20, catalytic domain |
IPR029019 | Beta-hexosaminidase, eukaryotic type, N-terminal |
IPR029018 | Beta-hexosaminidase-like, domain 2 |
Go id | Term | Ontology |
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GO:0004563 | beta-N-acetylhexosaminidase activity | MF |
GO:0005975 | carbohydrate metabolic process | BP |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | MF |
KEGG Orthology |
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K12373 |
COG category | Description |
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G | Glycoside hydrolase family 20 protein |
Class | Family | Subfamily |
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GH | GH20 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_376354.
Sequence id | CopciAB_376354.T0 |
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Sequence |
>CopciAB_376354.T0 MLILATFSAFLALLPGASALWPIPNDITTGTSPLRLARDFSINLNGVRHAPKDLVDAVSRTQHFLREDKLQLLVP DRGASLKSSISNSPFLKSLTVTLNSRTAKTRSIAEEAIADIGTRQEGYTLTVPADGSEAVLTANSTLGLFRGLTT FSQLWYELDGHVYTVQAPVSIRDAPQYVYRGLMLDTSRNYFPIADIKRTLDAMSWVKVNTLHWHIVDAQSFPLVV PGFEELSRKGAYNPASIYTPNDVKDIVNYAAQRGIDILVEVDTPGHTSIIHHAHPEHIACFEASPWTRYAYEPPA GQLRLASPATVNFTSSLLTSVARLFPSKFFSTGGDEINQPCYEDDAATQKELEKQGKTLEQALDTFTQVTHRALH DMGKTTVVWQEMVLDHKVTLSNDTVAMVWISSQHAKAVAQRGHRLIHAASDYFYLDCGGGGWIGNNPNGNSWCDP FKTWQKAYSFNPRANLTEEEAKLVLGGQQLLWAEQSGPSNLDPIVWPRAAASAEVFWSGHGRDGRTALPRLHDLA YRFVQRGVRAIPLQPQWCALRPGACDIDA |
Length | 554 |
Sequence id | CopciAB_376354.T0 |
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Sequence |
>CopciAB_376354.T0 ATGCTCATCCTCGCCACCTTCTCCGCGTTCTTAGCCTTACTGCCTGGAGCGTCTGCTTTATGGCCTATCCCCAAC GACATCACGACGGGTACGAGCCCGTTGAGGCTCGCTCGAGACTTTTCCATCAACCTGAACGGTGTGCGCCACGCA CCGAAGGACCTGGTCGACGCAGTCTCGCGCACACAGCACTTCCTGAGGGAGGACAAGCTCCAGCTCCTCGTTCCT GATCGCGGTGCATCCCTCAAGAGTTCCATCAGCAACTCGCCTTTCCTCAAGTCGCTCACAGTCACACTGAACAGC AGAACTGCGAAGACCAGGTCCATCGCTGAAGAGGCGATCGCAGATATCGGGACTCGCCAGGAGGGTTATACGCTC ACTGTTCCAGCGGACGGCTCGGAAGCGGTCTTAACTGCCAATTCGACCTTGGGGTTATTCCGTGGTCTGACGACG TTCAGCCAGCTGTGGTATGAGTTGGATGGCCATGTATACACAGTACAGGCTCCTGTCTCTATTCGAGATGCGCCA CAATATGTGTATCGCGGTCTTATGCTCGACACTTCGCGAAACTATTTCCCTATTGCCGACATCAAACGAACGCTG GATGCCATGAGCTGGGTCAAGGTCAACACCCTCCACTGGCACATCGTTGATGCTCAATCCTTCCCTCTCGTTGTT CCTGGGTTCGAGGAATTGTCACGCAAAGGAGCCTACAACCCGGCATCCATCTACACCCCCAATGACGTCAAGGAT ATCGTCAACTACGCTGCTCAGCGAGGAATCGATATTCTCGTTGAAGTAGACACTCCTGGGCACACGTCGATCATC CATCACGCGCATCCCGAACACATCGCTTGTTTCGAGGCCTCCCCCTGGACCCGCTACGCCTACGAACCACCCGCT GGACAGCTACGATTGGCTTCTCCAGCTACTGTCAACTTTACATCCTCCCTTTTGACCTCGGTCGCTAGGTTGTTC CCTTCCAAGTTCTTCAGCACTGGAGGGGATGAGATCAATCAGCCTTGCTATGAAGATGATGCCGCCACCCAGAAG GAATTGGAGAAGCAAGGAAAGACTCTGGAGCAGGCACTCGATACCTTCACTCAAGTTACGCACAGGGCTTTACAT GACATGGGCAAGACAACTGTTGTCTGGCAGGAGATGGTGCTCGACCATAAAGTTACCCTCTCAAACGATACCGTA GCCATGGTATGGATCTCTTCACAGCACGCCAAAGCAGTTGCCCAGCGAGGCCACAGACTCATCCACGCTGCATCC GATTACTTCTACCTCGACTGCGGTGGTGGAGGTTGGATTGGCAACAATCCCAACGGAAACAGCTGGTGTGACCCA TTCAAGACCTGGCAGAAGGCCTATTCTTTCAACCCCAGAGCCAACCTGACTGAAGAGGAAGCGAAGCTGGTTCTT GGAGGCCAACAACTCCTCTGGGCAGAGCAGTCTGGTCCGTCTAACTTGGATCCTATCGTGTGGCCCCGAGCTGCT GCATCCGCAGAGGTATTCTGGTCTGGCCACGGCCGCGATGGTCGAACTGCATTACCGCGCTTGCATGATCTTGCA TACCGTTTCGTTCAACGAGGCGTCCGTGCCATCCCTTTGCAGCCGCAATGGTGTGCCCTTCGCCCTGGTGCATGT GATATCGATGCATGA |
Length | 1665 |
Sequence id | CopciAB_376354.T0 |
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Sequence |
>CopciAB_376354.T0 ATTCTCCTTACTTACACTCGATGCTCATCCTCGCCACCTTCTCCGCGTTCTTAGCCTTACTGCCTGGAGCGTCTG CTTTATGGCCTATCCCCAACGACATCACGACGGGTACGAGCCCGTTGAGGCTCGCTCGAGACTTTTCCATCAACC TGAACGGTGTGCGCCACGCACCGAAGGACCTGGTCGACGCAGTCTCGCGCACACAGCACTTCCTGAGGGAGGACA AGCTCCAGCTCCTCGTTCCTGATCGCGGTGCATCCCTCAAGAGTTCCATCAGCAACTCGCCTTTCCTCAAGTCGC TCACAGTCACACTGAACAGCAGAACTGCGAAGACCAGGTCCATCGCTGAAGAGGCGATCGCAGATATCGGGACTC GCCAGGAGGGTTATACGCTCACTGTTCCAGCGGACGGCTCGGAAGCGGTCTTAACTGCCAATTCGACCTTGGGGT TATTCCGTGGTCTGACGACGTTCAGCCAGCTGTGGTATGAGTTGGATGGCCATGTATACACAGTACAGGCTCCTG TCTCTATTCGAGATGCGCCACAATATGTGTATCGCGGTCTTATGCTCGACACTTCGCGAAACTATTTCCCTATTG CCGACATCAAACGAACGCTGGATGCCATGAGCTGGGTCAAGGTCAACACCCTCCACTGGCACATCGTTGATGCTC AATCCTTCCCTCTCGTTGTTCCTGGGTTCGAGGAATTGTCACGCAAAGGAGCCTACAACCCGGCATCCATCTACA CCCCCAATGACGTCAAGGATATCGTCAACTACGCTGCTCAGCGAGGAATCGATATTCTCGTTGAAGTAGACACTC CTGGGCACACGTCGATCATCCATCACGCGCATCCCGAACACATCGCTTGTTTCGAGGCCTCCCCCTGGACCCGCT ACGCCTACGAACCACCCGCTGGACAGCTACGATTGGCTTCTCCAGCTACTGTCAACTTTACATCCTCCCTTTTGA CCTCGGTCGCTAGGTTGTTCCCTTCCAAGTTCTTCAGCACTGGAGGGGATGAGATCAATCAGCCTTGCTATGAAG ATGATGCCGCCACCCAGAAGGAATTGGAGAAGCAAGGAAAGACTCTGGAGCAGGCACTCGATACCTTCACTCAAG TTACGCACAGGGCTTTACATGACATGGGCAAGACAACTGTTGTCTGGCAGGAGATGGTGCTCGACCATAAAGTTA CCCTCTCAAACGATACCGTAGCCATGGTATGGATCTCTTCACAGCACGCCAAAGCAGTTGCCCAGCGAGGCCACA GACTCATCCACGCTGCATCCGATTACTTCTACCTCGACTGCGGTGGTGGAGGTTGGATTGGCAACAATCCCAACG GAAACAGCTGGTGTGACCCATTCAAGACCTGGCAGAAGGCCTATTCTTTCAACCCCAGAGCCAACCTGACTGAAG AGGAAGCGAAGCTGGTTCTTGGAGGCCAACAACTCCTCTGGGCAGAGCAGTCTGGTCCGTCTAACTTGGATCCTA TCGTGTGGCCCCGAGCTGCTGCATCCGCAGAGGTATTCTGGTCTGGCCACGGCCGCGATGGTCGAACTGCATTAC CGCGCTTGCATGATCTTGCATACCGTTTCGTTCAACGAGGCGTCCGTGCCATCCCTTTGCAGCCGCAATGGTGTG CCCTTCGCCCTGGTGCATGTGATATCGATGCATGATATATGTTATGCATTGACGAGCGCTCCTCGAAGGACAATT ATACGGTCTGGATGAATTTGGAAACACGAACGCTCGATTGCAGGATATGTTTGGACATCATACCTTGAATGTAAT AGCTATTTTCAAATTAGCTCGAATTGCTTG |
Length | 1830 |
Sequence id | CopciAB_376354.T0 |
---|---|
Sequence |
>CopciAB_376354.T0 ATTCTCCTTACTTACACTCGATGCTCATCCTCGCCACCTTCTCCGCGTTCTTAGCCTTACTGCCTGGAGCGTCTG CTTTATGGCCTATCCCCAACGACATCACGACGGGTACGAGCCCGTTGAGGCTCGCTCGAGACTTTTCCATCAACC TGAACGGTGTGCGCCACGCACCGAAGGACCTGGTCGACGCAGTCTCGCGCACACAGCACTTCCTGAGGGAGGACA AGCTCCAGCTCCTCGTTCCTGATCGCGGTGCATCCCTCAAGAGTTCCATCAGCAACTCGCCTTTCCTCAAGTCGC TCACAGTCACACTGAACAGCAGAACTGCGAAGACCAGGTCCATCGCTGAAGAGGCGATCGCAGATATCGGGACTC GCCAGGAGGGTTATACGCTCACTGTTCCAGCGGACGGCTCGGAAGCGGTCTTAACTGCCAATTCGACCTTGGGGT TATTCCGTGGTCTGACGACGTTCAGCCAGCTGTGGTATGAGTTGGATGGCCATGTATACACAGTACAGGCTCCTG TCTCTATTCGAGATGCGCCACAATATGTGCGTGCAGTTTCTTTTCATGAATTCAGTGTGGATACTCACAGGCCGT TTTGACATGCAGGTGTATCGCGGTCTTATGCTCGACACTTCGCGAAACTAGTGAGAGGCTTCCCCAGTCCCTCAG TACAGGATGCTCACGTCTCTCAGTTTCCCTATTGCCGACATCAAACGAACGCTGGATGCCATGAGCTGGGTCAAG GTGTGTTTAAACAACGTTTTGACGAGCTTGATACAAATTCATGGCAGGTCAACACCCTCCACTGGCACATCGTTG ATGCTCAATCCTTCCCTCTCGTTGTTCCTGGGTTCGAGGAATTGTCACGCAAAGGAGCCTACAACCCGGCATCCA TCTACACCCCCAATGACGTCAAGGATATCGTCAACTACGCTGCTCAGCGAGGAATCGATATTCTCGTTGAAGTAG ACACTCCTGGGCACACGTCGATCATCCATCACGCGCATCCCGAACACATCGCTTGTTTCGAGGCCTCCCCCTGGA CCCGCTACGCCTACGGCAAGTGTATTCTTTTGTGCGGCGTGTCTTTCTCATCCCAAACCCCGTCCACTAGAACCA CCCGCTGGACAGCTACGATTGGCTTCTCCAGCTACTGTCAACTTTACATCCTCCCTTTTGACCTCGGTCGCTAGG TTGTTCCCTTCCAAGTTCTTCAGCACTGGAGGGGATGAGATCAATCAGCCTTGCTATGAAGATGATGCCGCCACC CAGAAGGAATTGGGTATGTTGCATTTTATGTGAATGGATAAGACCCTGATTATCTCGGACTTGTAGAGAAGCAAG GAAAGACTCTGGAGCAGGCACTCGATACCTTCACTCAAGTTACGCACAGGGCTTTACATGACATGGGCAAGACAA CTGTTGTCTGGCAGGGTATGTCTCATACTTACTCCTACGACCGCGTTGAGAACTCAAGCAGCGCTGTAGAGATGG TGCTCGACCATAAAGTTACCCTCTCAAACGATACCGTAGCCATGTATGTCCTTCCACTGACCTACACCACACCCA CCGAACGTTCATATTGCTCTTTCCAGGGTATGGATCTCTTCACAGCACGCCAAAGCAGTTGCCCAGCGAGGCCAC AGACTCATCCACGCTGCATCCGATTACTTCTACCTCGACTGCGGTGGTGGAGGTTGGATTGGCAACAATCCCAAC GGAAACAGCTGGTGTGACCCATTCAAGACCTGGCAGAAGGCCTATTCTTTCAACCCCAGAGCCAACCTGACTGAA GAGGAAGCGAAGCTGGTTCTTGGAGGCCAACAACTCCTCTGGGCAGAGCAGTCTGGTCCGTCTAACTTGGATCCT ATCGTGTGGCCCCGAGCTGCTGCATCCGCAGAGGTGAGTTTAGATAGATACAAACGACGTGGGCTTGGAACTGAA ACCTGATGCGCTGTACTCTAGGTATTCTGGTCTGGCCACGGCCGCGATGGTCGAACTGCATTACCGCGCTTGCAT GATCTTGCATACCGTTTCGTTCAACGAGGCGTCCGTGCCATCCCTTTGCAGCCGCAATGGTGTGCCCTTCGCCCT GGTGCATGTGATATCGATGCATGATATATGTTATGCATTGACGAGCGCTCCTCGAAGGACAATTATACGGTCTGG ATGAATTTGGAAACACGAACGCTCGATTGCAGGATATGTTTGGACATCATACCTTGAATGTAATAGCTATTTTCA AATTAGCTCGAATTGCTTG |
Length | 2269 |