Systematic name | CopciAB_377030 | Strain | Coprinopsis cinerea Okayama 7 |
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Standard name | - | Synonyms | 377030 |
Uniprot id | Functional description | Aryl-alcohol oxidase | |
Location | scaffold_6:72656..75247 | Strand | + |
Gene length (nt) | 2592 | Transcript length (nt) | 2039 |
CDS length (nt) | 1875 | Protein length (aa) | 624 |
Strain name | Gene / Protein name |
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Strain name | Gene / Protein name | Pident | E-value | Bits |
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0 |
Name | Summary | Attribution | Assay type | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Carbon metabolism | Transcriptional changes along alternative morphogenetic paths of C. cinerea | Xie et al. 2020 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Complex carbon sources 1 (long incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Coprinopsis challenged with bacteria | Transcriptional response to Bacillus subtilis and Escherichia coli. | Kombrink et al. 2018 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 1 | Time series expression profiling of basidiospore and oidium germination | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Early development 2 | Time series expression profiling of mycelial growth, light induction and fruiting body initiation. | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Fruiting body development | RNA-Seq analysis of fruiting body development | Krizsan et al. 2019 | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Nitrogen sources (12h incubation) | Expression profiling on diverse nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Plant biomass (12h incubation) | Expression profiling on diverse plant biomasses as carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon and nitrogen sources | Expression profiling on diverse complex carbon and nitrogen sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Simple and complex carbon sources (12h incubation) | Expression profiling on diverse complex carbon sources. | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Starvation induced by water agar transfer | Expression profiling on starvation induced by transfer to water agar | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Straw time series | Time series expression profiling on straw as a carbon source | Hegedus et al. | RNA-Seq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 1 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Stress conditions 2 | Expression profiling under various stress conditions | Hegedus et al. | QuantSeq | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Systematic name | - |
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Protein id | CopciAB_377030.T0 |
Description | Aryl-alcohol oxidase |
Analysis | Signature accession | Signature description | InterPro Accession | Start | End |
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Pfam | PF00732 | GMC oxidoreductase | IPR000172 | 64 | 377 |
Pfam | PF05199 | GMC oxidoreductase | IPR007867 | 474 | 615 |
Prediction | Start | End | Score |
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No records |
Domain n | Start | End | Length |
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1 | 25 | 47 | 22 |
Accession | Description |
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IPR012132 | Glucose-methanol-choline oxidoreductase |
IPR007867 | Glucose-methanol-choline oxidoreductase, C-terminal |
IPR000172 | Glucose-methanol-choline oxidoreductase, N-terminal |
IPR036188 | FAD/NAD(P)-binding domain superfamily |
Go id | Term | Ontology |
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GO:0050660 | flavin adenine dinucleotide binding | MF |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors | MF |
KEGG Orthology |
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K00108 |
COG category | Description |
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E | Aryl-alcohol oxidase |
Class | Family | Subfamily |
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AA | AA3 | AA3_2 |
Group |
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No records |
Arrow shows the origin of gene family containing CopciAB_377030.
Sequence id | CopciAB_377030.T0 |
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Sequence |
>CopciAB_377030.T0 MQKYFARPLINRLSQCVSKGINTPVSLVMFLRVLPLSLLVVALFLLVPTSSLITDTLPRSLPRFDFIIAGGGNAG LVLANRLTENPRWNVLVIEAGPTHETIPNILVPGISAVAPNTSWDWNYTSTPQPSLGNTSIYIPRGHVLGGSNTI NGMFYVRGSSSDYDRWAKVTGDDGWSWKKILPYVFKTEKWTKLSDSHGSRGKYDPRWHSETGITSVSLSAAPQAI DAKVVEASRELGGEFAYNRDMNDGNMLGVGWTQLTVGNGERSGAAMTYLAPKYANRPNLVVLVGHRVTKVSATRR PSGRVPLFTTVHFVSAHDTSKELRVTAFKEVIVSAGVFNSPQILQLSGIGDVSLLQALGIEPVVNLPSVGQNLTD QPLMFLNWGLGIEGTVTPDAELQRKWLDQWRTNRTGPLTSSGSNHIISLRIPDNSSIWSGYDDPSSGKNTPHFEL AISANGNPYLPPSIAVVVIAIQTTSRGSVKLRSADPFDPPLIDSAVYASNFDFLTMKEGIKAAQRFFSAPTWSEW NLTVSPPLPPLSDEEAWNAQVDSILRLTTANAGHNGGTCAMSPRGAKWGVVDPDLKVKKVEGLRVVDSSVTPFVT AGSTQAGIYAIAERAADLIKELWM |
Length | 624 |
Sequence id | CopciAB_377030.T0 |
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Sequence |
>CopciAB_377030.T0 ATGCAGAAGTATTTCGCCAGACCACTCATAAATAGACTGTCACAATGTGTTTCAAAAGGAATCAACACTCCAGTC TCCTTGGTCATGTTCCTCCGCGTTTTGCCACTCTCGCTCCTCGTCGTCGCGCTCTTCCTGTTAGTTCCGACTTCC TCTTTGATAACTGATACTCTACCACGCAGCCTCCCAAGGTTCGATTTCATCATCGCAGGAGGTGGAAATGCAGGC CTTGTTCTCGCTAACCGATTGACGGAGAATCCTCGATGGAATGTCTTGGTTATCGAAGCAGGTCCAACACACGAG ACCATTCCCAACATTCTCGTACCAGGGATCTCAGCGGTGGCGCCGAATACCTCTTGGGATTGGAACTACACGTCT ACACCCCAGCCGTCGCTTGGCAATACGAGCATCTACATCCCCAGGGGCCATGTATTGGGCGGGAGTAACACCATA AACGGAATGTTCTACGTTCGAGGATCATCCTCGGACTACGATCGATGGGCGAAGGTCACTGGGGACGACGGATGG TCGTGGAAGAAGATTTTACCGTATGTGTTCAAGACCGAAAAGTGGACCAAGTTATCGGACAGCCATGGCTCGAGG GGGAAGTACGATCCTCGTTGGCACAGCGAGACCGGAATCACATCTGTGAGCCTCTCCGCAGCACCTCAAGCAATC GACGCCAAAGTAGTGGAGGCGAGCCGCGAGCTAGGAGGAGAGTTTGCCTACAATCGGGATATGAACGATGGGAAT ATGCTCGGCGTCGGTTGGACTCAGCTAACCGTTGGTAACGGTGAACGCAGTGGGGCAGCTATGACATACCTAGCA CCGAAATACGCGAACCGGCCAAACCTGGTAGTTCTGGTAGGTCATCGTGTCACGAAGGTTTCCGCGACTCGGAGA CCTAGTGGCCGTGTTCCTCTCTTTACGACAGTCCATTTTGTTTCCGCCCACGATACTTCGAAAGAGCTTCGAGTC ACAGCTTTCAAAGAGGTGATCGTCTCGGCTGGGGTCTTCAACTCTCCGCAAATCCTGCAGCTCTCGGGGATAGGA GACGTCTCCCTACTTCAAGCCCTGGGTATTGAACCGGTGGTAAATTTACCAAGCGTTGGACAGAACCTGACGGAT CAGCCATTGATGTTCTTGAATTGGGGGTTAGGAATTGAAGGGACAGTCACCCCAGACGCCGAACTTCAGCGTAAA TGGCTCGATCAATGGCGTACCAATCGTACAGGGCCACTAACCAGTTCAGGGTCCAACCACATCATTTCGCTTCGG ATCCCTGACAACTCGAGTATCTGGAGCGGGTACGACGACCCTTCTAGCGGCAAGAACACCCCTCATTTCGAATTG GCCATTTCCGCGAATGGGAACCCATACCTCCCGCCGTCGATCGCGGTCGTAGTCATCGCCATTCAAACCACCTCT CGAGGCTCGGTAAAACTGCGCTCGGCGGACCCGTTCGATCCACCACTCATCGATTCCGCCGTTTACGCTTCCAAC TTTGATTTTCTAACCATGAAAGAAGGGATAAAGGCCGCTCAGCGGTTCTTCTCTGCCCCTACGTGGAGCGAATGG AACCTCACAGTCTCGCCGCCTCTCCCGCCTTTATCCGACGAAGAAGCGTGGAACGCCCAAGTCGACTCAATATTA CGATTGACGACAGCAAACGCCGGTCACAATGGCGGGACGTGCGCAATGTCGCCTCGAGGTGCGAAATGGGGAGTT GTCGACCCGGATCTGAAAGTGAAAAAGGTTGAGGGACTGAGGGTTGTCGATTCAAGTGTAACACCGTTCGTAACT GCGGGCTCGACCCAGGCTGGGATTTATGCCATTGCGGAGAGGGCGGCTGATCTGATCAAGGAGCTGTGGATGTGA |
Length | 1875 |
Sequence id | CopciAB_377030.T0 |
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Sequence |
>CopciAB_377030.T0 GGCGACAAGCCCAATGGGCTCCTGGCTATGCGCGGTGGAAGGGCTTCGTACCTCGATCTCGAGTGACCAAGCTGG TCAAGGAAGCCAGTCGAAGGCTTTGAGGGCGTGGAAAGAGCCATGCAGAAGTATTTCGCCAGACCACTCATAAAT AGACTGTCACAATGTGTTTCAAAAGGAATCAACACTCCAGTCTCCTTGGTCATGTTCCTCCGCGTTTTGCCACTC TCGCTCCTCGTCGTCGCGCTCTTCCTGTTAGTTCCGACTTCCTCTTTGATAACTGATACTCTACCACGCAGCCTC CCAAGGTTCGATTTCATCATCGCAGGAGGTGGAAATGCAGGCCTTGTTCTCGCTAACCGATTGACGGAGAATCCT CGATGGAATGTCTTGGTTATCGAAGCAGGTCCAACACACGAGACCATTCCCAACATTCTCGTACCAGGGATCTCA GCGGTGGCGCCGAATACCTCTTGGGATTGGAACTACACGTCTACACCCCAGCCGTCGCTTGGCAATACGAGCATC TACATCCCCAGGGGCCATGTATTGGGCGGGAGTAACACCATAAACGGAATGTTCTACGTTCGAGGATCATCCTCG GACTACGATCGATGGGCGAAGGTCACTGGGGACGACGGATGGTCGTGGAAGAAGATTTTACCGTATGTGTTCAAG ACCGAAAAGTGGACCAAGTTATCGGACAGCCATGGCTCGAGGGGGAAGTACGATCCTCGTTGGCACAGCGAGACC GGAATCACATCTGTGAGCCTCTCCGCAGCACCTCAAGCAATCGACGCCAAAGTAGTGGAGGCGAGCCGCGAGCTA GGAGGAGAGTTTGCCTACAATCGGGATATGAACGATGGGAATATGCTCGGCGTCGGTTGGACTCAGCTAACCGTT GGTAACGGTGAACGCAGTGGGGCAGCTATGACATACCTAGCACCGAAATACGCGAACCGGCCAAACCTGGTAGTT CTGGTAGGTCATCGTGTCACGAAGGTTTCCGCGACTCGGAGACCTAGTGGCCGTGTTCCTCTCTTTACGACAGTC CATTTTGTTTCCGCCCACGATACTTCGAAAGAGCTTCGAGTCACAGCTTTCAAAGAGGTGATCGTCTCGGCTGGG GTCTTCAACTCTCCGCAAATCCTGCAGCTCTCGGGGATAGGAGACGTCTCCCTACTTCAAGCCCTGGGTATTGAA CCGGTGGTAAATTTACCAAGCGTTGGACAGAACCTGACGGATCAGCCATTGATGTTCTTGAATTGGGGGTTAGGA ATTGAAGGGACAGTCACCCCAGACGCCGAACTTCAGCGTAAATGGCTCGATCAATGGCGTACCAATCGTACAGGG CCACTAACCAGTTCAGGGTCCAACCACATCATTTCGCTTCGGATCCCTGACAACTCGAGTATCTGGAGCGGGTAC GACGACCCTTCTAGCGGCAAGAACACCCCTCATTTCGAATTGGCCATTTCCGCGAATGGGAACCCATACCTCCCG CCGTCGATCGCGGTCGTAGTCATCGCCATTCAAACCACCTCTCGAGGCTCGGTAAAACTGCGCTCGGCGGACCCG TTCGATCCACCACTCATCGATTCCGCCGTTTACGCTTCCAACTTTGATTTTCTAACCATGAAAGAAGGGATAAAG GCCGCTCAGCGGTTCTTCTCTGCCCCTACGTGGAGCGAATGGAACCTCACAGTCTCGCCGCCTCTCCCGCCTTTA TCCGACGAAGAAGCGTGGAACGCCCAAGTCGACTCAATATTACGATTGACGACAGCAAACGCCGGTCACAATGGC GGGACGTGCGCAATGTCGCCTCGAGGTGCGAAATGGGGAGTTGTCGACCCGGATCTGAAAGTGAAAAAGGTTGAG GGACTGAGGGTTGTCGATTCAAGTGTAACACCGTTCGTAACTGCGGGCTCGACCCAGGCTGGGATTTATGCCATT GCGGAGAGGGCGGCTGATCTGATCAAGGAGCTGTGGATGTGACTCACTGTATCGGCTCTTGTGGTCAACTGATTT TTATTGCTGCATGC |
Length | 2039 |
Sequence id | CopciAB_377030.T0 |
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Sequence |
>CopciAB_377030.T0 GGCGACAAGCCCAATGGGCTCCTGGCTATGCGCGGTGGAAGGGCTTCGTACCTCGATCTCGAGTGACCAAGCTGG TCAAGGAAGCCAGTCGAAGGCTTTGAGGGCGTGGAAAGAGCCATGCAGAAGTATTTCGCCAGACCACTCATAAAT AGACTGTCACAATGTGTTTCAAAAGGAATCAACACTCCAGTCTCCTTGGTCATGTTCCTCCGCGTTTTGCCACTC TCGCTCCTCGTCGTCGCGCTCTTCCTGTTAGTTCCGACTTCCTCTTTGATAACTGATACTCTACCACGCAGCCTC CCAAGGTTCGATTTCATCATCGCAGGAGGTCAGTCATAGGTTGTCTCATCCATAGCGCATGTTTGCTGAGCACTC CAGCAGGTGGAAATGCAGGCCTTGTTCTCGCTAACCGATTGACGGAGAATCCTCGATGGAATGTCTTGGTTATCG AAGCAGGTCCAACGTATGGTCTCTTTCCACTCGTCATTTTACGACACCGTTGCTGATTCGTCGTTCTTTCAGACA CGAGACCATTCCCAACATTCTCGTACCAGGGATCTCAGCGGTGGCGCCGAATACCTCTTGGGATTGGAACTACAC GTCTACACCCCAGCCGTCGCTTGGCAATACGAGCATCTACATCCCCAGGGGCCATGTATTGGGCGGGAGTAACAC CATAAGTGAGTTTCCACTCTCGCTATACCACCCTTCGACCCAACGAGACTCTATAAATAGACGGAATGTTCTACG TTCGAGGATCATCCTCGGACTACGATCGATGGGCGAAGGTCACTGGGGACGACGGATGGTCGTGGAAGAAGATTT TACCGTATGTGTTCAAGGTGGGCGCCTTAGTCACATTCGAAGTGCAGTCCTTCCAACCTGACGAGCGGGTTTAGA CCGAAAAGTGGACCAAGTTATCGGACAGCCATGGCTCGAGGGGGAAGTACGATCCTCGTTGGCACAGCGAGACCG GAATCACATCTGTGAGCCTCTCCGCAGCACCTCAAGCAATCGACGCCAAAGTAGTGGAGGCGAGCCGCGAGCTAG GAGGAGAGTTTGCCTACAATCGGGATATGAACGATGGGAATATGCTCGGCGTCGGTTGGTAGCCCTGCCCCTACC CGTGATCTAACATCGTCTGACATGATGCATAGGTTGGACTCAGCTAACCGTTGGTAACGGTGAACGCAGTGGGGC AGCTATGACATACCTAGCACCGAAATACGCGAACCGGCCAAACCTGGTAGTTCTGGTAGGTCATCGTGTCACGAA GGTTTCCGCGACTCGGAGACCTAGTGGCCGTGTTCCTCTCTTTACGACAGTCCATTTTGTTTCCGCCCACGATAC TTCGAAAGGTGTGTCCACCGCCCGCTGTGCTACGCAATATCCTCTTAGCCATTCCAGAGCTTCGAGTCACAGCTT TCAAAGAGGTGATCGTCTCGGCTGGGGTCTTCAACTCTCCGCAAATCCTGCAGCTCTCGGGGATAGGAGACGTCT CCCTACTTCAAGCCCTGGGTATTGAACCGGTGGTAAATTTACCAAGCGTTGGACAGAACCTGACGGATCAGCCAT TGATGTTCTTGAATTGGGGGTTAGGAATTGAAGGGACAGTCACCCCGTAAGTCCTCGGCTCAGCCTCGAACTTCT GTTGCCATGTTCTAATTCAAGTTCCAGAGACGCCGAACTTCAGCGTAAATGGCTCGATCAATGGCGTACCAATCG TACAGGGCCACTAACCAGTTCAGGGTCCAACCACATCATTTCGCTTCGGATCCCTGACAACTCGAGTATCTGGAG CGGGTACGACGACCCTTCTAGCGGCAAGAACACCCCTCATTTCGAATTGGCCATTTCCGTGAGTAGCTCTCGACT TTCATCGCGATAGAATTTGACAGACCCTCATTAGGCGAATGGGAACCCATACCTCCCGCCGTCGATCGCGGTCGT AGTCATCGCCATTCAAACCACCTCTCGTGAGCTCCCTCCGCTCAATCTGAGACCCAGCTCCCCCTCACCTCATTG TAGGAGGCTCGGTAAAACTGCGCTCGGCGGACCCGTTCGATCCACCACTCATCGATTCCGCCGTTTACGCTTCCA ACTTTGATTTTCTAACCATGAAAGAAGGGATAAAGGCCGCTCAGCGGTTCTTCTCTGCCCCTACGTGGAGCGAAT GGAACCTCACAGTCTCGCCGCCTCTCCCGCCTTTATCCGACGAAGAAGCGTGGAACGCCCAAGTCGACTCAATAT TACGATTGACGACAGCAAACGCCGGTCACAATGGCGGGACGTGCGCAATGTCGCCTCGAGGTGCGAAATGGGGAG TTGTCGACCCGGATCTGAAAGTGAAAAAGGTTGAGGGACTGAGGGTTGTCGATTCAAGTGTAACAGTGAGTCTCG TCAAATTCGTAGTGCTCGCATGTGATGATCTCGAAGCTGAATCTGTTTGAATTTAAAGCCGTTCGTAACTGCGGG CTCGACCCAGGCTGGGATTTATGCCATTGCGGAGAGGGCGGCTGATCTGATCAAGGAGCTGTGGATGTGACTCAC TGTATCGGCTCTTGTGGTCAACTGATTTTTATTGCTGCATGC |
Length | 2592 |