CopciAB_393050
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_393050 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 393050
Uniprot id Functional description kinase-like protein
Location scaffold_2:2390921..2396263 Strand +
Gene length (nt) 5343 Transcript length (nt) 4252
CDS length (nt) 3717 Protein length (aa) 1238

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Hypsizygus marmoreus strain 51987-8 Hypma_RDB23999 40.7 1.235E-280 895
Agrocybe aegerita Agrae_CAA7267623 40 9.673E-270 863
Pleurotus eryngii ATCC 90797 Pleery1_1446698 36 3.574E-229 744
Pleurotus ostreatus PC15 PleosPC15_2_1073822 35.3 4.955E-218 711
Pleurotus ostreatus PC9 PleosPC9_1_91922 35.3 4.85E-218 711
Flammulina velutipes Flave_chr10AA00103 52.4 1.273E-57 220
Auricularia subglabra Aurde3_1_1279061 28.7 6.194E-55 212
Schizophyllum commune H4-8 Schco3_2606711 30.5 3.573E-54 209

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 48.3208 11.8541 6.844
oidia 16.8619 1.0635 0.614
vegetative_mycelium 20.1497 2.7124 1.566
primordia 128.6168 4.9773 2.8737
hyphal_knot 32.0648 5.0923 2.9401
young_fruiting_body 60.1489 6.7967 3.9241
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 24.0375 6.387 3.6876
Wheat bran 18.7357 6.6221 3.8233
Horse manure 27.6892 9.635 5.5628
Oak leaves 214.9698 221.6198 127.9523
Hay 28.6373 18.907 10.916
Corn stalk 59.4497 34.7078 20.0385
Pectine 50.3262 11.5168 6.6492
Microcrystalline cellulose 36.2126 3.9926 2.3051
Xylose 17.1708 4.6641 2.6928
Cellobiose 16.3186 2.9452 1.7004
Lignin 44.1169 23.8452 13.767
Apple peels 29.6259 1.4706 0.849
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 15.2806 2.06 1.1893
Bsubtilis 20.559 2.8999 1.6743
Ecoli 30.2506 4.3216 2.4951
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 22.9253 5.3359 3.0807
BS 4h 16.267 3.4471 1.9902
BS 8h 13.867 4.6929 2.7094
BS 12h 11.0784 6.0291 3.4809
Oidia 0 h 4.3822 2.4229 1.3988
Oidia 18 h 4.7387 0.7113 0.4107
Sclerotia 7.1318 2.3595 1.3623
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 5.6689 0.9064 0.5233
DM 36h 3.5359 1.1555 0.6672
DM 60h 4.6765 0.6807 0.393
DM 84h 5.1997 0.8528 0.4924
DM 108h 4.979 0.4189 0.2419
DM 132h 5.0303 1.351 0.78
DM 156hAE 9.0611 0.7436 0.4293
ELI1hAE 11.0047 4.0874 2.3598
ELI2hAE 7.9877 2.6702 1.5416
LI2hAE 6.4885 1.7893 1.0331
LI6hAE 11.0453 0.3635 0.2099
LI12hAE 15.4873 2.944 1.6997
LI18hAE 16.8573 5.0306 2.9044
LI 24hAE 11.5272 1.6375 0.9454
DM 156hAM 5.6339 0.1075 0.0621
ELI1hAM 4.8694 0.5052 0.2917
ELI2hAM 4.127 1.1267 0.6505
LI2hAM 4.1404 0.8496 0.4905
LI6hAM 6.8333 0.6426 0.371
LI12hAM 23.5108 6.0322 3.4827
LI18hAM 31.7974 18.0671 10.431
LI 24hAM 10.7899 2.1019 1.2135
LI 24hHK 13.3269 3.8604 2.2288
L/D 6h 41.4902 7.6072 4.392
L/D 12h 40.6521 12.8422 7.4144
L/D 18h 27.6677 5.2551 3.034
L/D 24h 38.072 6.5768 3.7971
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 29.2834 2.6376 1.5228
Hyphal knots 85.25 12.9418 7.472
Primordium 1 102.1041 9.8538 5.6891
Primordium 2 85.8202 16.1798 9.3414
Young Fruiting body cap 261.9137 104.2676 60.1989
Younf fruiting body gill 88.3076 29.5978 17.0883
Young fruiting body stipe 145.7306 48.7016 28.1179
Mature fruiting body cap_gill 15.1695 1.4961 0.8638
Mature fruiting body stipe 51.8245 12.3981 7.158
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 13.3487 1.0834 0.6255
NH4NO3 17.0461 1.3 0.7506
Proline 26.073 9.595 5.5397
Tryptophan 18.2977 2.7371 1.5803
Isoleucin 30.1329 3.9625 2.2878
Arginine 13.4116 2.4679 1.4248
Metionine 26.2406 2.6099 1.5068
NaNO3 12.1861 1.1214 0.6474
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 13.3487 1.0834 0.6255
Citrus peel 7.6485 0.6931 0.4002
Poplar leaves 11.8904 0.9632 0.5561
Typha leaves 10.2961 1.4204 0.8201
Overwintered Salix leaves 10.3298 0.625 0.3608
Reed flowering 9.7138 1.7106 0.9876
Tigernut 7.4512 1.016 0.5866
Energy cane 12.2404 2.8152 1.6253
Guar gum 14.0026 4.0551 2.3412
Apple peels 14.0474 2.8022 1.6178
Cellobiose 19.5635 0.8251 0.4764
Corn stalk 15.3956 3.406 1.9665
Horse manure 15.3807 2.4425 1.4102
Lignin 11.2593 4.0569 2.3422
Microcrystalline cellulose 17.5011 3.2632 1.884
Oak leaves 12.8038 2.9483 1.7022
Pectin esterified 11.1889 3.7011 2.1368
Poplar sawdust 18.0954 3.4446 1.9887
Wheat bran 9.3544 1.7426 1.0061
Chlamydomonas reinhardtii 13.3061 0.5999 0.3463
Vertatryl alcohol 18.0196 2.3746 1.371
Furfural 11.6588 1.3395 0.7734
Autoclaved mycelium 11.1458 1.8146 1.0476
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 31.0816 1.34 0.7736
Ribose 27.7829 0.2644 0.1527
Mannose 30.5124 0.3958 0.2798
Fructose 33.2909 6.0952 3.5191
Arabinose 37.432 2.0772 1.1992
Xylose 31.2744 1.8504 1.0684
Galacturonic acid 32.1126 3.4878 2.0137
Rhamnogalacturonan 34.7314 2.7911 1.6115
Pectin esterified 34.1741 2.9959 1.7297
Polygalacturonic acid 36.2793 5.345 3.0859
Sodium acetate 26.0121 4.6932 2.7096
No nitrogen 43.6257 2.6109 1.5074
BSA 40.0016 4.793 2.7673
Glutamine 36.5919 3.61 2.0842
No phosphate 36.3421 2.7749 1.6021
No carbon 29.5563 1.433 1.0133
No sulphur 31.6607 1.3968 0.8064
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 13.3487 1.0834 0.6255
Amylose 16.4239 0.772 0.4457
Fucose 17.4881 3.6897 2.1302
Galactose 17.8582 3.019 1.743
Lactose 17.7567 4.0625 2.3455
Maltose 17.9604 5.6313 3.2512
Mannitol 16.1538 2.2878 1.3209
Rhamnose 15.819 4.4986 2.5973
Sorbitol 18.6262 1.1679 0.6743
Trehalose 16.1508 5.7365 3.312
Glycerol 16.5109 4.4539 2.5714
Glucuronic acid 17.0702 3.0037 1.7342
Arabinan 13.7414 3.9888 2.3029
Galactan 14.4717 3.7458 2.1626
Galactomannan 9.9832 1.9564 1.1295
Glucan 15.7692 2.159 1.2465
Xylan 11.6368 1.5481 0.8938
Xyloglucan 14.4661 1.0571 0.6103
Arabinogalactan 16.3968 1.0035 0.5794
Pectin 14.7441 3.4861 2.0127
Rhamnogalacturonan 13.7238 2.0829 1.2026
Polygalacturonic acid 17.3965 3.6692 2.1184
Mannan 16.4795 0.9009 0.5201
Amylopectin 13.1207 6.4415 3.719
Inulin 19.2067 1.5641 0.903
BSA 9.9608 2.9431 1.6992
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 4.6765 0.6807 0.393
2h WAT 5.8547 1.9089 1.1021
4h WAT 10.4361 4.9672 2.8678
8h WAT 4.876 1.3947 0.8053
16h WAT 12.1765 1.3213 0.7628
24h WAT 10.6561 2.0743 1.1976
WAT hyphal knot -30h 3.834 1.4129 0.8157
WAT hyphal knot -22h 7.3737 1.8436 1.0644
WAT hyphal knot -15h 8.467 1.2936 0.7468
WAT hyphal knot -7.5h 7.2075 1.8618 1.0749
WAT hyphal knot 9.2831 2.1973 1.2686
WAT hyphal knot +7.5h 10.1085 1.6007 0.9242
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 20.4445 11.1876 6.4592
Straw 3h 38.4264 32.2686 18.6303
Straw 6h 24.6705 24.3112 14.0361
Straw 12h 20.447 6.5101 3.7586
Straw 24h 11.4154 4.8995 2.8287
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 2.3446 0.6394 0.3692
Frost (-20C, 30min) 6.6781 0.3212 0.1854
Heat shock (47C, 2h) 7.5871 1.5577 0.8993
High CO2 8.346 1.3494 0.779
Drought (4% agar, 12h) 6.6945 2.5168 1.4531
Oxidative (1mM H2O2, 3h) 8.1885 0.2336 0.1348
Acidic (pH4, 3h) 4.6322 1.1549 0.6668
Alkaline (pH9, 3h) 3.577 1.6039 0.926
Osmotic (sorbitol 2h) 2.6684 1.3232 0.764
CongoRed (3h) 3.7044 1.1858 0.6846
Cobalt chloride control 14.3769 3.6952 2.1334
Cobalt chloride 2mM 11.2029 0.1206 0.0696
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 4.7132 2.8671 1.6553
Cold stimulation 5.7646 2.2199 1.2817
Scratched surface 4.0204 0.2916 0.1684
Ca2+, 200mM, 24h 7.088 1.1046 0.6378
Cu2+, 2mM, 6h 4.7297 1.3067 0.7544
Voriconazole 3.4908 1.4228 0.8214
Trichoderma interaction, early 5.2388 0.2302 0.1329
Trichoderma interaction 60h 12.1105 11.6544 6.7287
Cobalt chloride 2mM repeat 9.1596 1.1028 0.6367
Hypoxia 5.3024 1.5751 0.9094
Hypoxia control 5.3088 1.16 0.6697
Protoplastation control 19.9179 3.1182 2.2049
Protoplastation 3.5h 22.6833 4.2983 3.0393
Protoplastation 1.5h 27.5701 1.9555 1.3828

General data

Systematic name -
Protein id CopciAB_393050.T0
Description kinase-like protein

Annotation summary

0 300 600 900 1200 1238

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd21037 MLKL_NTD - 17 148
CDD cd06224 REM IPR000651 818 924
Pfam PF07714 Protein tyrosine and serine/threonine kinase IPR001245 228 481
Pfam PF00618 RasGEF N-terminal motif IPR000651 814 892
Pfam PF00617 RasGEF domain IPR001895 970 1152

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR001895 Ras guanine-nucleotide exchange factors catalytic domain
IPR011009 Protein kinase-like domain superfamily
IPR000719 Protein kinase domain
IPR023578 Ras guanine nucleotide exchange factor domain superfamily
IPR000651 Ras-like guanine nucleotide exchange factor, N-terminal
IPR036964 Ras guanine-nucleotide exchange factor, catalytic domain superfamily
IPR036537 Adaptor protein Cbl, N-terminal domain superfamily
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain
IPR008266 Tyrosine-protein kinase, active site

GO

Go id Term Ontology
GO:0005085 guanyl-nucleotide exchange factor activity MF
GO:0007264 small GTPase mediated signal transduction BP
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0007166 cell surface receptor signaling pathway BP

KEGG

KEGG Orthology
K03099
K04365
K06619

EggNOG

COG category Description
T kinase-like protein

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_393050 across fungi.

Arrow shows the origin of gene family containing CopciAB_393050.

Protein

Sequence id CopciAB_393050.T0
Sequence >CopciAB_393050.T0
MSLKDLLVLSPVPGLDAAVTILTATWNNVQNVKVYKQQCHDLSTRCTMLILALNEGMQNQHQSNDWATELENVVR
AINAKVQEWARLNRLKSFLQQSEIQEALHRFHRRLDGAMDRYHIAATLEFRRGLYESRAILERDKAEMRTVLQQI
ARDNSDLRSLLSETSGKPLEEIMEHFQTELMDPEIPKPQKDDFRFGLWWLHSRSSKLPPLPDLTGQVTKESEHVA
FFGTFNDIYKGRWLNEKMVALRLPRSLPNTPRLQRRFEEEVKIWRKLNHPNVLTLYGITKIGQYVYLVSPWMDNG
TAINYIQKNPNVDRLGLLEQITSGLEYLHSQNIVHGDIRGANILISENGVALLADFGLSKFLGDIGTVAQAMTVT
VASNPRWSAPEILRNAGSKSTVSPYSKKSDIWSIGMTFLELLTGECPYAYESIDVAVLRLIDNNETPKRPREGKY
HHNITDHLWKLMTRCWKMKPDSRPDIAYVRGKLIRIREEAYSPDAAQQSTQAASLFSPSFISTRVGTSRHQRVAT
VDNYSVVSSNSGNDRNRPQDLPTLDVPQNGNLSHRPPSLRPSTSGSSNSGNSSNSGGPSKHRPNAPRFSPIDEDT
ALSPTSYSSSPPSISPLSAFSAQALTGRSPAKRQGTGFSGFSGTNANKHPAPPSPSASISSSIDGNYRREFSSAP
RLPPVSPPSSAGLLSELGWSKSSSSNSASSSRTVTQGTAYTRMDLRQSNGTRSNGNSGQNILYENNEETTPHRAT
PSSSPPNANHPCTAPLPMKGKARSIDTVGVKSIFSTNSSVQPSDELQTAISSPEPIVYTNADRVTAGTLQGLVER
LINNFNLQKDMEFRDVMLTACIDFITPEDMFNILIRRFEDAEQGSDMRPELRLGIQYTIFKVLMYWLLGRHLPVN
TALLWRMEEFCQSAIKLKTSQPMIMKGNELLQLIEERIAEQRLEESRSSPFDLSPDRRVLSSSQITPRDLAIALT
LLEGDKFRKIQPCDYLAHQRRQPISGYLNHVKAAAIVNTRIVQWVKQSILHFDEVRHRADVIKFYINTARECRKL
RNYSSFVAIAMGLDSKPVERLKLTKNLLSEKFKKWLNEIVSILYPMDDYAAYRSALREIHDPQYADYCIPWLELH
LDQLALLLRENSRVVEIDHHPLINFKRYLEYVKQFKSVLGFTPADLEEYRDQGQLAYLEHQLAGIEVTDSADDEM
MKRSLELEQGETKLYEHRVLERQSLGFATPRKYRTSGK
Length 1238

Coding

Sequence id CopciAB_393050.T0
Sequence >CopciAB_393050.T0
ATGAGCCTGAAGGACCTGCTAGTCCTAAGTCCGGTACCTGGTCTCGATGCTGCTGTAACCATCTTAACCGCTACA
TGGAACAACGTTCAGAACGTGAAGGTCTACAAGCAACAATGCCACGACCTGAGCACACGTTGCACGATGCTCATT
CTAGCCCTCAACGAGGGGATGCAGAATCAGCATCAATCCAACGATTGGGCCACGGAACTCGAGAATGTTGTCCGC
GCGATCAACGCCAAAGTGCAAGAATGGGCCAGGTTGAACCGCCTCAAATCGTTCCTCCAACAGAGCGAAATTCAA
GAAGCCCTCCACCGTTTCCACCGACGTCTCGACGGTGCAATGGACAGGTATCATATAGCCGCTACTTTAGAATTT
CGAAGGGGGTTGTACGAATCCCGAGCTATTCTGGAGCGAGACAAGGCCGAGATGCGTACAGTCCTGCAGCAGATC
GCGAGGGATAACTCGGACCTCAGGTCACTCTTAAGCGAGACCTCCGGCAAACCTCTCGAGGAAATCATGGAGCAC
TTCCAGACAGAACTCATGGACCCTGAAATCCCCAAACCACAGAAAGACGACTTTCGTTTTGGGCTGTGGTGGCTA
CACTCGCGTTCGTCCAAACTGCCTCCCTTGCCAGATCTCACTGGTCAAGTCACCAAGGAGAGCGAGCATGTTGCG
TTCTTCGGGACCTTCAACGATATTTATAAGGGACGGTGGTTGAACGAGAAGATGGTCGCACTCCGTTTACCAAGG
AGTCTACCCAACACACCACGTCTACAACGGCGATTTGAAGAAGAAGTGAAGATATGGCGCAAGCTTAACCATCCC
AACGTGCTCACGCTGTACGGCATCACGAAGATAGGACAGTACGTCTACCTGGTGAGCCCGTGGATGGACAATGGG
ACCGCCATCAACTATATCCAGAAGAACCCCAACGTCGATCGACTTGGACTGTTGGAACAGATTACCTCAGGCCTC
GAGTATCTCCACTCTCAGAACATTGTTCACGGCGACATTCGAGGGGCCAATATCCTGATATCCGAGAACGGCGTC
GCTCTGTTAGCTGACTTTGGGCTATCAAAGTTCTTGGGGGATATCGGAACTGTCGCTCAAGCGATGACAGTAACC
GTTGCGTCCAACCCTCGCTGGTCAGCTCCAGAAATCCTCCGCAATGCAGGCTCGAAATCCACGGTCTCACCATAT
TCTAAGAAATCCGACATCTGGTCCATTGGGATGACCTTCCTCGAACTTCTGACGGGGGAATGCCCATATGCGTAT
GAATCCATTGACGTCGCCGTACTTAGGCTCATCGACAACAACGAGACGCCAAAGCGGCCCCGGGAAGGGAAATAC
CACCACAACATTACGGACCACTTGTGGAAGCTCATGACTCGATGCTGGAAGATGAAACCAGACTCTCGCCCCGAT
ATCGCTTACGTTAGGGGCAAGCTGATACGAATACGGGAGGAAGCCTATTCTCCAGACGCTGCTCAACAGTCCACG
CAGGCGGCGAGTCTATTCTCCCCTTCCTTCATCTCCACCAGAGTAGGCACATCGAGACACCAACGCGTGGCCACG
GTTGATAACTATAGCGTCGTCAGCAGCAACAGTGGCAACGACAGGAACAGGCCGCAGGATCTACCTACGCTCGAC
GTCCCACAGAATGGAAATCTATCGCACCGCCCACCAAGTTTGCGCCCGTCAACAAGCGGGAGTAGCAACAGCGGT
AACTCCAGTAACTCAGGCGGGCCCAGCAAACACCGACCAAATGCCCCCAGGTTCTCTCCAATTGATGAGGACACT
GCCCTCTCCCCAACCTCGTACTCCTCCAGCCCTCCATCGATATCCCCGCTGTCAGCCTTCTCCGCTCAAGCTCTC
ACCGGTCGTAGCCCTGCCAAACGACAGGGTACAGGCTTTTCCGGTTTCTCGGGCACGAATGCGAACAAGCATCCA
GCTCCGCCGTCGCCGAGCGCATCCATAAGTAGCAGCATTGACGGAAACTACCGTCGAGAGTTCTCCAGCGCTCCT
CGCCTACCCCCCGTGTCCCCGCCTTCATCTGCTGGGTTGCTGTCCGAGTTGGGTTGGAGCAAGTCGTCATCGAGC
AATTCTGCCAGCAGTAGCCGGACGGTCACTCAAGGAACAGCGTACACGCGCATGGACTTGCGGCAATCCAATGGA
ACCCGATCCAACGGGAACAGTGGGCAAAACATACTATACGAGAATAATGAAGAGACAACCCCCCACCGCGCCACC
CCTTCCTCCTCGCCCCCCAACGCGAACCATCCGTGTACTGCCCCGCTACCCATGAAAGGCAAGGCCCGTTCCATT
GACACTGTGGGCGTGAAAAGCATATTTTCCACCAACTCCAGTGTCCAACCGTCAGACGAGCTTCAAACCGCCATC
TCAAGCCCGGAACCGATCGTTTACACCAATGCGGACAGGGTCACAGCTGGTACTTTACAAGGGCTTGTCGAGAGG
CTTATCAACAACTTCAATCTCCAGAAAGATATGGAGTTTCGCGATGTGATGCTTACAGCGTGTATCGACTTCATC
ACCCCGGAGGATATGTTTAATATTCTGATCCGCCGCTTCGAGGATGCCGAGCAAGGGTCGGACATGAGGCCTGAA
TTACGATTGGGTATCCAATATACGATCTTCAAGGTGCTTATGTACTGGTTGTTGGGCCGACATCTCCCCGTGAAC
ACCGCCCTCCTCTGGCGAATGGAAGAATTCTGTCAATCGGCGATCAAGCTCAAGACCTCGCAGCCCATGATCATG
AAGGGCAACGAGTTGCTCCAACTCATCGAAGAACGGATAGCGGAACAAAGACTTGAGGAATCTCGGAGCTCGCCA
TTCGACTTGTCTCCCGATCGCAGAGTGTTGTCATCCTCCCAAATTACACCACGGGATCTCGCCATCGCCCTCACT
CTCCTCGAGGGTGACAAGTTCCGCAAGATACAGCCATGCGACTATCTCGCCCACCAACGACGCCAACCAATTAGC
GGTTATCTCAACCACGTCAAAGCCGCCGCCATCGTTAACACGCGTATCGTCCAATGGGTGAAGCAGTCGATCCTT
CACTTTGACGAAGTCAGACACCGAGCAGACGTCATCAAGTTCTACATTAACACCGCGAGGGAATGCCGCAAGTTG
CGCAATTACAGTTCCTTTGTTGCCATTGCGATGGGGCTAGATTCAAAGCCAGTGGAGCGGCTGAAACTCACAAAG
AATCTACTCTCCGAGAAGTTCAAGAAGTGGTTGAATGAGATTGTGTCAATTCTCTATCCAATGGACGATTACGCA
GCCTATCGCTCAGCATTGCGTGAAATCCATGATCCTCAATACGCCGACTATTGCATCCCATGGCTAGAACTGCAT
CTCGACCAACTAGCCCTACTCCTCCGCGAGAACAGCCGAGTGGTCGAAATCGACCATCACCCGCTGATCAACTTC
AAACGCTACCTCGAATACGTCAAGCAATTCAAATCAGTCCTTGGATTCACACCCGCAGATCTAGAAGAGTACAGA
GATCAGGGACAGCTTGCCTATCTCGAGCATCAGCTCGCTGGAATCGAGGTCACTGATTCGGCGGATGACGAGATG
ATGAAGAGGAGTTTGGAGTTGGAACAGGGGGAGACGAAGCTTTATGAACATCGCGTTTTGGAGCGGCAGAGTTTG
GGCTTCGCCACGCCCAGAAAGTATCGGACGTCAGGCAAGTAA
Length 3717

Transcript

Sequence id CopciAB_393050.T0
Sequence >CopciAB_393050.T0
ATTATGCTCCTTGCTTCTGACTGCCACCATCCTCCCGTCGACATCGTCCCTGCCTAACATTCGTGCTCTGCCGCT
GCATCTCCCTTGGCTATGAGCCTGAAGGACCTGCTAGTCCTAAGTCCGGTACCTGGTCTCGATGCTGCTGTAACC
ATCTTAACCGCTACATGGAACAACGTTCAGAACGTGAAGGTCTACAAGCAACAATGCCACGACCTGAGCACACGT
TGCACGATGCTCATTCTAGCCCTCAACGAGGGGATGCAGAATCAGCATCAATCCAACGATTGGGCCACGGAACTC
GAGAATGTTGTCCGCGCGATCAACGCCAAAGTGCAAGAATGGGCCAGGTTGAACCGCCTCAAATCGTTCCTCCAA
CAGAGCGAAATTCAAGAAGCCCTCCACCGTTTCCACCGACGTCTCGACGGTGCAATGGACAGGTATCATATAGCC
GCTACTTTAGAATTTCGAAGGGGGTTGTACGAATCCCGAGCTATTCTGGAGCGAGACAAGGCCGAGATGCGTACA
GTCCTGCAGCAGATCGCGAGGGATAACTCGGACCTCAGGTCACTCTTAAGCGAGACCTCCGGCAAACCTCTCGAG
GAAATCATGGAGCACTTCCAGACAGAACTCATGGACCCTGAAATCCCCAAACCACAGAAAGACGACTTTCGTTTT
GGGCTGTGGTGGCTACACTCGCGTTCGTCCAAACTGCCTCCCTTGCCAGATCTCACTGGTCAAGTCACCAAGGAG
AGCGAGCATGTTGCGTTCTTCGGGACCTTCAACGATATTTATAAGGGACGGTGGTTGAACGAGAAGATGGTCGCA
CTCCGTTTACCAAGGAGTCTACCCAACACACCACGTCTACAACGGCGATTTGAAGAAGAAGTGAAGATATGGCGC
AAGCTTAACCATCCCAACGTGCTCACGCTGTACGGCATCACGAAGATAGGACAGTACGTCTACCTGGTGAGCCCG
TGGATGGACAATGGGACCGCCATCAACTATATCCAGAAGAACCCCAACGTCGATCGACTTGGACTGTTGGAACAG
ATTACCTCAGGCCTCGAGTATCTCCACTCTCAGAACATTGTTCACGGCGACATTCGAGGGGCCAATATCCTGATA
TCCGAGAACGGCGTCGCTCTGTTAGCTGACTTTGGGCTATCAAAGTTCTTGGGGGATATCGGAACTGTCGCTCAA
GCGATGACAGTAACCGTTGCGTCCAACCCTCGCTGGTCAGCTCCAGAAATCCTCCGCAATGCAGGCTCGAAATCC
ACGGTCTCACCATATTCTAAGAAATCCGACATCTGGTCCATTGGGATGACCTTCCTCGAACTTCTGACGGGGGAA
TGCCCATATGCGTATGAATCCATTGACGTCGCCGTACTTAGGCTCATCGACAACAACGAGACGCCAAAGCGGCCC
CGGGAAGGGAAATACCACCACAACATTACGGACCACTTGTGGAAGCTCATGACTCGATGCTGGAAGATGAAACCA
GACTCTCGCCCCGATATCGCTTACGTTAGGGGCAAGCTGATACGAATACGGGAGGAAGCCTATTCTCCAGACGCT
GCTCAACAGTCCACGCAGGCGGCGAGTCTATTCTCCCCTTCCTTCATCTCCACCAGAGTAGGCACATCGAGACAC
CAACGCGTGGCCACGGTTGATAACTATAGCGTCGTCAGCAGCAACAGTGGCAACGACAGGAACAGGCCGCAGGAT
CTACCTACGCTCGACGTCCCACAGAATGGAAATCTATCGCACCGCCCACCAAGTTTGCGCCCGTCAACAAGCGGG
AGTAGCAACAGCGGTAACTCCAGTAACTCAGGCGGGCCCAGCAAACACCGACCAAATGCCCCCAGGTTCTCTCCA
ATTGATGAGGACACTGCCCTCTCCCCAACCTCGTACTCCTCCAGCCCTCCATCGATATCCCCGCTGTCAGCCTTC
TCCGCTCAAGCTCTCACCGGTCGTAGCCCTGCCAAACGACAGGGTACAGGCTTTTCCGGTTTCTCGGGCACGAAT
GCGAACAAGCATCCAGCTCCGCCGTCGCCGAGCGCATCCATAAGTAGCAGCATTGACGGAAACTACCGTCGAGAG
TTCTCCAGCGCTCCTCGCCTACCCCCCGTGTCCCCGCCTTCATCTGCTGGGTTGCTGTCCGAGTTGGGTTGGAGC
AAGTCGTCATCGAGCAATTCTGCCAGCAGTAGCCGGACGGTCACTCAAGGAACAGCGTACACGCGCATGGACTTG
CGGCAATCCAATGGAACCCGATCCAACGGGAACAGTGGGCAAAACATACTATACGAGAATAATGAAGAGACAACC
CCCCACCGCGCCACCCCTTCCTCCTCGCCCCCCAACGCGAACCATCCGTGTACTGCCCCGCTACCCATGAAAGGC
AAGGCCCGTTCCATTGACACTGTGGGCGTGAAAAGCATATTTTCCACCAACTCCAGTGTCCAACCGTCAGACGAG
CTTCAAACCGCCATCTCAAGCCCGGAACCGATCGTTTACACCAATGCGGACAGGGTCACAGCTGGTACTTTACAA
GGGCTTGTCGAGAGGCTTATCAACAACTTCAATCTCCAGAAAGATATGGAGTTTCGCGATGTGATGCTTACAGCG
TGTATCGACTTCATCACCCCGGAGGATATGTTTAATATTCTGATCCGCCGCTTCGAGGATGCCGAGCAAGGGTCG
GACATGAGGCCTGAATTACGATTGGGTATCCAATATACGATCTTCAAGGTGCTTATGTACTGGTTGTTGGGCCGA
CATCTCCCCGTGAACACCGCCCTCCTCTGGCGAATGGAAGAATTCTGTCAATCGGCGATCAAGCTCAAGACCTCG
CAGCCCATGATCATGAAGGGCAACGAGTTGCTCCAACTCATCGAAGAACGGATAGCGGAACAAAGACTTGAGGAA
TCTCGGAGCTCGCCATTCGACTTGTCTCCCGATCGCAGAGTGTTGTCATCCTCCCAAATTACACCACGGGATCTC
GCCATCGCCCTCACTCTCCTCGAGGGTGACAAGTTCCGCAAGATACAGCCATGCGACTATCTCGCCCACCAACGA
CGCCAACCAATTAGCGGTTATCTCAACCACGTCAAAGCCGCCGCCATCGTTAACACGCGTATCGTCCAATGGGTG
AAGCAGTCGATCCTTCACTTTGACGAAGTCAGACACCGAGCAGACGTCATCAAGTTCTACATTAACACCGCGAGG
GAATGCCGCAAGTTGCGCAATTACAGTTCCTTTGTTGCCATTGCGATGGGGCTAGATTCAAAGCCAGTGGAGCGG
CTGAAACTCACAAAGAATCTACTCTCCGAGAAGTTCAAGAAGTGGTTGAATGAGATTGTGTCAATTCTCTATCCA
ATGGACGATTACGCAGCCTATCGCTCAGCATTGCGTGAAATCCATGATCCTCAATACGCCGACTATTGCATCCCA
TGGCTAGAACTGCATCTCGACCAACTAGCCCTACTCCTCCGCGAGAACAGCCGAGTGGTCGAAATCGACCATCAC
CCGCTGATCAACTTCAAACGCTACCTCGAATACGTCAAGCAATTCAAATCAGTCCTTGGATTCACACCCGCAGAT
CTAGAAGAGTACAGAGATCAGGGACAGCTTGCCTATCTCGAGCATCAGCTCGCTGGAATCGAGGTCACTGATTCG
GCGGATGACGAGATGATGAAGAGGAGTTTGGAGTTGGAACAGGGGGAGACGAAGCTTTATGAACATCGCGTTTTG
GAGCGGCAGAGTTTGGGCTTCGCCACGCCCAGAAAGTATCGGACGTCAGGCAAGTAAAGGGCGTACCTGCGCGTC
CTCCACCTCGGTTAATGGCAGGCTGTCATGATGTATCGACACCAAACGCCCCCATAGCAGCTATGCTCACACGAG
GGTAAAGCTTATTTGCGGAATGAATGAGGGTGAAGACGCCAACGTGCTTCTCTCTTGCGATATCTGGTCCCAGGT
TCTCCATCAGCCTACGTTTCCGTCGCTGTGGTTCTCCTTTCGTTCCTTTCTGTCCGGTAATGTCCATTTACCCCA
TTTTGAGCGGCAAGAAAGGACGAAAAGCTTTGCTTGTATGTTTCCGACATATTTATTGGACACCTGTTACTATTA
TTTAACTACTCATTGTTTCGAGATACCCTCTTGTTGTCACTTTACCCTCACTGCTCGCTGTACTTTGTACTTTTA
GAATGTCACATTACATCGTCTATTTGAAATGCAGGAATCCTATTGCTTTGGT
Length 4252

Gene

Sequence id CopciAB_393050.T0
Sequence >CopciAB_393050.T0
ATTATGCTCCTTGCTTCTGACTGCCACCATCCTCCCGTCGACATCGTCCCTGCCTAACATTCGTGCTCTGCCGCT
GCATCTCCCTTGGCTATGAGCCTGAAGGACCTGCTAGTCCTAAGTCCGGTACCTGGTCTCGATGCTGCTGTAACC
ATCTGTGAGTGCACTCATTTCCTTTTGTTCATAGCCCGAGCAGTGCTTACTCGCCTTGTGTTGCCAATGCAGTAA
CCGCTACATGGAACAACGTTCAGAACGTGAAGGTCTACAAGGTAGGTTATCGTATCCTCTCCTCCATCCGCGTCG
CTCATGGCGCGACACAGCAACAATGCCACGACCTGAGCACACGTTGCACGATGCTCATTCTAGCCCTCAACGAGG
GGATGCAGAATCAGCATCAATCCAACGATTGGGCCACGGAACTCGAGAAGTGAGTAAAGCGAGATAACCATCTTC
AGTAGCCTCTTCGCTTCGAGAACTCAACTCTTCCTCCGCGCTTTCTAGTGTTGTCCGCGCGATCAACGCCAAAGT
GCAAGAATGGGCCAGGTTGAACCGCCTCAAATCGTTCCTCCAACAGAGCGAAATTCAAGAAGCCCTCCACCGTTT
CCACCGACGTCTCGACGGTGCAATGGACAGGTATCATGTAAGTGACGACCCATTGCATTCAGCGTTTTGTTGACC
GGGCGAGCTTTCATCTACAGATAGCCGCTACTTTAGAATTTCGAAGGGGGTTGTACGAATCCCGAGCTATTCTGG
AGCGAGACAAGGCCGAGATGCGTACAGTCCTGCAGCAGATCGCGAGGGATAACTCGGACCTCAGGTCACTCTTAA
GCGAGACCTCCGGCAAACCTCTCGAGGAAATCATGGAGCACTTCCAGACAGTGAGTTCCATCTGCCCGTTGTCAG
TACGGATGACCAAATACAATGTTTTGCCCATGTTTAGGAACTCATGGACCCTGAAATCCCCAAACCACAGAAAGA
CGACTTTCGTTTTGGGCTGTGGTGGCTACACTCGCGTTCGTCCAAACTGCCTCCCTTGCCAGATCGTAAGCCTTC
CCGCTTTTAGTACTACGAAAGCTGTTCAAACAAAACCATCGCCTCCTCGATATAGTCACTGGTCAAGTCACCAAG
GAGAGCGAGCATGTTGCGTTCTTCGGGACCTTCAACGATATTTATAAGGGTACGCAGAATATCCTTGCCTTACAA
TGAAGGACACAAAAAGTTGATCCGTGTTTGGCACCAAGGACGGTGGTTGAACGAGAAGATGGTAAGGATCTATTT
GGCGCCTTTATTTTTAGAACATCTGAGCCAATTCCATTGTGCCACTCTAGGTCGCACTCCGTTTACCAAGGAGTC
TACCCAACACACCACGTCTACAACGGGTTAGTGTTCCTGGAAGCAGGCGCGTTCAACGTATTAATTAATTTATCG
CAGCGATTTGAAGAAGAAGTGAAGATATGGCGCAAGCTTAACCATCCCAACGTGCTCACGCTGTACGGCATCACG
AAGATAGGACAGTACGTCTACCTGGTGAGCCCGTGGATGGACAATGGGACCGCCATCAACTATATCCAGAAGAAC
CCCAACGTCGATCGACTTGGACTGTTGGAACAGATTACCTCAGGTTGGCATCCCCTCCACCTTTCCATGAAAGAA
ACTCAATAACCCTTGCGCCAGGCCTCGAGTATCTCCACTCTCAGAACATTGTTCACGGCGACATTCGAGGGGTAA
GTATGGTACCCCTATCAACTCATACCCCATTCTAATGGCAAGCACCACTGCATAGGCCAATATCCTGATATCCGA
GAACGGCGTCGCTCTGTTAGCTGACTTTGGGCTATCAAAGTTCTTGGGGGATATCGGAACTGTACGCATCCCGCC
TCTTTCCTGTCGACTATCTGACTCAATGCTATCAGGTCGCTCAAGCGATGACAGTAACCGTTGCGTCCAACCCTC
GCTGGTCAGCTCCAGAAATCCTCCGCAATGCAGGCTCGAAATCCACGGTCTCACCATATTCTAAGAAATCCGACA
TCTGGTCCATTGGGATGACCTTCCTCGAACTTCTGACGGGGGAATGCCCATATGCGTATGAATCCATTGACGTCG
CCGTACTTAGGCTCATCGACAACAACGAGACGCCAAAGCGGCCCCGGGAAGGGAAATACCACCACAACATTACGG
ACCACTTGTGGAAGCTCATGACTCGATGCTGGAAGATGAAACCAGACTCTCGCCCCGATATCGCTTACGTTAGGG
GCAAGCTGATACGAATACGGGAGGAAGCCTATTCTCCAGGTATGGTTTTATCCCCATGTTGATTCCGAGTGCCGC
ATCCTTACTCCTTTCAGACGCTGCTCAACAGTCCACGCAGGCGGCGAGTCTATTCTCCCCTTCCTTCATCTCCAC
CAGAGTAGGCACATCGAGACACCAACGCGTGGCCACGGTTGATAACTATAGCGTCGTCAGCAGCAACAGTGGCAA
CGACAGGAACAGGCCGCAGGATCTACCTACGCTCGACGTCCCACAGAATGGAAATCTATCGCACCGCCCACCAAG
TTTGCGCCCGTCAACAAGCGGGAGTAGCAACAGCGGTAACTCCAGTAACTCAGGCGGGCCCAGCAAACACCGACC
AAATGCCCCCAGGTTCTCTCCAATTGATGAGGACACTGCCCTCTCCCCAACCTCGTACTCCTCCAGCCCTCCATC
GATATCCCCGCTGTCAGCCTTCTCCGCTCAAGCTCTCACCGGTCGTAGCCCTGCCAAACGACAGGGTACAGGCTT
TTCCGGTTTCTCGGGCACGAATGCGAACAAGCATCCAGCTCCGCCGTCGCCGAGCGCATCCATAAGTAGCAGCAT
TGACGGAAACTACCGTCGAGAGTTCTCCAGCGCTCCTCGCCTACCCCCCGTGTCCCCGCCTTCATCTGCTGGGTT
GCTGTCCGAGTTGGGTTGGAGCAAGTCGTCATCGAGCAATTCTGCCAGCAGTAGCCGGACGGTCACTCAAGGAAC
AGCGTACACGCGCATGGACTTGCGGCAATCCAATGGAACCCGATCCAACGGGAACAGTGGGCAAAACATACTATA
CGAGAATAATGAAGAGACAACCCCCCACCGCGCCACCCCTTCCTCCTCGCCCCCCAACGCGAACCATCCGTGTAC
TGCCCCGCTACCCATGAAAGGCAAGGCCCGTTCCATTGACACTGTGGGCGTGAAAAGCATATTTTCCACCAACTC
CAGTGTCCAACCGTCAGACGAGCTTCAAACCGCCATCTCAAGCCCGGAACCGATCGTTTACACCAATGCGGACAG
GGTCACAGCTGGTACTTTACAAGGGCTTGTCGAGAGGCTTATCAACAACTTCAGTAAGCAAATTCCCTCCCAACT
GTCGCACCATCTTCGATTCTAATCACGCCTTTCCATTCTCCTAGATCTCCAGAAAGATATGGAGTTTCGCGATGT
GATGCTTACAGCGTGTATCGACTTCATCACCCCGGAGGATATGTTTAATATTCTGATCCGCCGCTTCGAGGATGC
CGAGCAAGGGTCGGACATGAGGCCTGAATTACGATTGGGTATCCAATATACGTGAGTTAGCCTGGTTTCCTTCCG
GAAAGGAGGTTCTAACATCTTTATCGCCAGGATCTTCAAGGTGCTTATGTACTGGTTGTTGGGCCGACATCTCCC
CGTGAACACCGCCCTCCTCTGGCGAATGGAAGAATTCTGTCAATCGGCGATCAAGCTCAAGACCTCGCAGCCCAT
GATCATGAAGGGCAACGAGTTGCTCCAACTCATCGAAGAACGGGTAAGGATAACCCCGATATTCACCTCTACGGC
TAACATCTCATGATATGTAGATAGCGGAACAAAGACTTGAGGAATCTCGGAGCTCGCCATTCGACTTGTCTCCCG
ATCGCAGAGTGTTGTCATCCTCCCAAATTACACCACGGGATCTCGCCATCGCCCTCACTCTCCTCGAGGGTGACA
AGTTCCGCAAGATACAGCCATGCGACTATCTCGCCCACCAACGACGCCAACCAATTAGCGGTTATCTCAACCACG
TCAAAGCCGCCGCCATCGTTAACACGCGTATCGTCCAATGGGTGAAGCAGTCGATCCTTCACTTTGACGAAGTCA
GACACCGAGCAGACGTCATCAAGTTCTACATTAACACCGCGAGGGTGAGTGGCTACGGAACTTTCCATTGAACTG
TTGACGAAATCATCCTTCTTTGCCTCTTCTTGAATATACAGGAATGCCGCAAGTTGCGCAATTACAGTTCCTTTG
TTGCCATTGCGATGGGGCTAGATTCAAAGCCAGTGGAGCGGCTGAAACTCACAAAGAATCTACTCTCCGAGAAGT
TCAAGAAGTGGTTGAATGAGATTGTGTCAATTCTCTATCCAATGGACGATTACGCAGCCTATCGCTCAGCATTGC
GTGAAATCCATGATCCTCAATACGCCGACTATTGCATCCCATGGCTAGGTGAGAAAGAGTTATCTCCCTTTCCCC
GAAATACATCCCGATAACTGTTTTTTTTTCCCGCCACACAACCTCTAGAACTGCATCTCGACCAACTAGCCCTAC
TCCTCCGCGAGAACAGCCGAGTGGTCGAAATCGACCATCACCCGCTGATCAACTTCAAACGCTACCTCGAATACG
TCAAGCAATTCAAATCAGTCCTTGGATTCACACCCGCAGATCTAGAAGAGTACAGAGATCAGGGACAGCTTGCCT
ATCTCGAGCATCAGCTCGCTGGAATCGAGGTCACTGATTCGGCGGATGACGAGATGATGAAGAGGAGTTTGGAGT
TGGAACAGGGGGAGACGAAGCTTTATGAACATCGCGTTTTGGAGCGGCAGAGTTTGGGCTTCGCCACGCCCAGAA
AGTATCGGACGTCAGGCAAGTAAAGGGCGTACCTGCGCGTCCTCCACCTCGGTTAATGGCAGGCTGTCATGATGT
ATCGACACCAAACGCCCCCATAGCAGCTATGCTCACACGAGGGTAAAGCTTATTTGCGGAATGAATGAGGGTGAA
GACGCCAACGTGCTTCTCTCTTGCGATATCTGGTCCCAGGTTCTCCATCAGCCTACGTTTCCGTCGCTGTGGTTC
TCCTTTCGTTCCTTTCTGTCCGGTAATGTCCATTTACCCCATTTTGAGCGGCAAGAAAGGACGAAAAGCTTTGCT
TGTATGTTTCCGACATATTTATTGGACACCTGTTACTATTATTTAACTACTCATTGTTTCGAGATACCCTCTTGT
TGTCACTTTACCCTCACTGCTCGCTGTACTTTGTACTTTTAGAATGTCACATTACATCGTCTATTTGAAATGCAG
GAATCCTATTGCTTTGGT
Length 5343