CopciAB_399478
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_399478 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 399478
Uniprot id Functional description Camk camkl kin4 protein kinase
Location scaffold_10:912160..916804 Strand -
Gene length (nt) 4645 Transcript length (nt) 4429
CDS length (nt) 3606 Protein length (aa) 1201

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7262169 65.3 0 1519
Hypsizygus marmoreus strain 51987-8 Hypma_RDB17700 54.8 0 1212
Pleurotus eryngii ATCC 90797 Pleery1_1584331 51.2 0 1123
Lentinula edodes W1-26 v1.0 Lentinedodes1_12102 52.7 0 1121
Lentinula edodes NBRC 111202 Lenedo1_1255126 52.7 0 1119
Flammulina velutipes Flave_chr04AA00474 52.3 0 1087
Ganoderma sp. 10597 SS1 v1.0 Gansp1_130424 48.9 1.223E-304 998
Grifola frondosa Grifr_OBZ74539 47.1 9.131E-286 908
Auricularia subglabra Aurde3_1_1237586 44.4 3.634E-259 831
Lentinula edodes B17 Lened_B_1_1_7405 71.4 1.886E-212 693
Pleurotus ostreatus PC15 PleosPC15_2_1048733 78.9 8.53E-163 546
Schizophyllum commune H4-8 Schco3_2514250 80.3 5.451E-142 484
Pleurotus ostreatus PC9 PleosPC9_1_98061 91.5 1.857E-141 482
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_210033 91 3.518E-141 481
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_78306 91 3.666E-141 481

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 232.4398 11.1514 6.4382
oidia 153.6871 26.3837 15.2327
vegetative_mycelium 146.4191 20.7291 11.968
primordia 168.1739 8.8418 5.1048
hyphal_knot 160.8613 17.3836 10.0364
young_fruiting_body 124.9029 10.881 6.2822
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 135.9903 21.78 12.5747
Wheat bran 49.832 21.6469 12.4979
Horse manure 124.0119 55.5165 32.0525
Oak leaves 172.9264 26.2281 15.1428
Hay 98.5927 28.3288 16.3557
Corn stalk 127.0089 7.7352 4.4659
Pectine 162.2517 11.0835 6.3991
Microcrystalline cellulose 134.6884 28.2772 16.3259
Xylose 127.0576 18.9037 10.914
Cellobiose 118.9147 19.713 11.3813
Lignin 96.4906 50.012 28.8745
Apple peels 159.9881 17.8147 10.2853
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 105.2637 7.4822 4.3198
Bsubtilis 105.2991 2.0518 1.1846
Ecoli 99.751 6.6768 3.8548
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 7.8192 3.3929 1.9589
BS 4h 26.6867 1.3231 0.7639
BS 8h 36.8583 8.3699 4.8324
BS 12h 41.6736 2.8792 1.6623
Oidia 0 h 25.7049 10.0991 5.8307
Oidia 18 h 94.4276 18.5918 10.734
Sclerotia 109.9061 14.7805 8.5336
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 51.5471 8.7569 5.0558
DM 36h 76.6888 13.3814 7.7258
DM 60h 89.0778 1.256 0.7252
DM 84h 73.0464 1.278 0.7378
DM 108h 72.9615 12.049 6.9565
DM 132h 73.3215 3.973 2.2938
DM 156hAE 92.4757 3.4219 1.9757
ELI1hAE 91.7793 4.5239 2.6119
ELI2hAE 93.7873 3.2834 1.8957
LI2hAE 94.7944 4.487 2.5906
LI6hAE 99.1474 5.3058 3.0633
LI12hAE 92.8735 7.0014 4.0423
LI18hAE 105.634 17.2992 9.9877
LI 24hAE 85.3283 18.1881 10.5009
DM 156hAM 65.7996 8.8226 5.0937
ELI1hAM 62.9026 18.4057 10.6265
ELI2hAM 67.0948 10.5935 6.1162
LI2hAM 69.1269 17.7595 10.2535
LI6hAM 87.4577 6.7094 3.8737
LI12hAM 83.2334 3.242 1.8717
LI18hAM 102.7864 17.2603 9.9652
LI 24hAM 86.8586 6.2967 3.6354
LI 24hHK 64.8611 13.3882 7.7297
L/D 6h 96.4813 10.759 6.2117
L/D 12h 98.1729 6.3674 3.6762
L/D 18h 148.0218 10.3532 5.9774
L/D 24h 154.2507 5.0921 2.9399
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 54.4928 8.7401 5.0461
Hyphal knots 135.536 37.736 21.7869
Primordium 1 106.0376 14.0136 8.0908
Primordium 2 85.2434 10.4287 6.021
Young Fruiting body cap 160.6113 85.5319 49.3819
Younf fruiting body gill 69.8331 9.888 5.7088
Young fruiting body stipe 211.7722 62.0646 35.833
Mature fruiting body cap_gill 181.2176 60.1704 34.7394
Mature fruiting body stipe 211.8837 47.8653 27.635
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 123.066 5.5797 3.2215
NH4NO3 142.1491 5.9062 3.41
Proline 128.3348 14.2455 8.2247
Tryptophan 138.7025 18.8003 10.8544
Isoleucin 149.0914 15.0751 8.7036
Arginine 137.1182 8.0844 4.6675
Metionine 119.2855 2.5739 1.486
NaNO3 103.4218 3.538 2.0427
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 123.066 5.5797 3.2215
Citrus peel 119.6184 10.111 5.8376
Poplar leaves 136.6328 18.0827 10.4401
Typha leaves 122.1963 9.8733 5.7003
Overwintered Salix leaves 127.1901 12.1141 6.9941
Reed flowering 115.0473 7.8756 4.547
Tigernut 82.9436 17.725 10.2335
Energy cane 126.3354 10.2759 5.9328
Guar gum 120.4338 34.4721 19.9025
Apple peels 100.0348 17.0732 9.8572
Cellobiose 135.2905 4.3434 2.5076
Corn stalk 109.217 16.0544 9.269
Horse manure 108.8933 18.0664 10.4307
Lignin 72.3513 15.7819 9.1117
Microcrystalline cellulose 127.0293 8.0871 4.6691
Oak leaves 101.2381 31.5537 18.2175
Pectin esterified 62.9839 9.2551 5.3434
Poplar sawdust 115.784 25.1306 14.5091
Wheat bran 51.9867 18.7539 10.8276
Chlamydomonas reinhardtii 123.8494 15.9724 9.2216
Vertatryl alcohol 96.3535 7.0139 4.0495
Furfural 83.1282 1.4436 0.8334
Autoclaved mycelium 136.7053 12.9046 7.4505
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 121.2692 13.2947 7.6757
Ribose 127.7467 11.8923 6.866
Mannose 130.3468 4.4185 3.1243
Fructose 135.3495 10.2354 5.9094
Arabinose 135.2615 15.7826 9.1121
Xylose 145.3824 6.2006 3.5799
Galacturonic acid 133.7878 8.0541 4.65
Rhamnogalacturonan 126.9259 4.0477 2.3369
Pectin esterified 136.8506 4.6705 2.6965
Polygalacturonic acid 133.2811 8.1305 4.6942
Sodium acetate 130.621 7.0899 4.0934
No nitrogen 129.2779 9.9994 5.7732
BSA 141.3247 9.3429 5.3941
Glutamine 138.255 12.1876 7.0365
No phosphate 130.0424 16.1155 9.3043
No carbon 127.4661 2.9471 2.0839
No sulphur 136.0789 15.7948 9.1191
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 123.066 5.5797 3.2215
Amylose 109.6329 12.9668 7.4864
Fucose 113.5751 13.7919 7.9628
Galactose 117.14 1.0201 0.589
Lactose 145.4684 20.3465 11.7471
Maltose 150.0715 31.9114 18.424
Mannitol 165.6249 19.709 11.379
Rhamnose 128.2095 11.0465 6.3777
Sorbitol 116.7514 7.6586 4.4217
Trehalose 119.4023 41.3671 23.8833
Glycerol 135.7787 16.6079 9.5885
Glucuronic acid 129.6559 6.7604 3.9031
Arabinan 109.5604 19.2511 11.1146
Galactan 120.3017 14.5761 8.4155
Galactomannan 95.3543 21.2375 12.2615
Glucan 129.4297 7.6409 4.4115
Xylan 111.1725 8.4804 4.8961
Xyloglucan 124.2497 13.2548 7.6526
Arabinogalactan 133.2299 12.3691 7.1413
Pectin 61.423 36.9019 21.3053
Rhamnogalacturonan 72.5284 24.4071 14.0915
Polygalacturonic acid 118.4233 4.4901 2.5923
Mannan 113.8819 4.9977 2.8854
Amylopectin 85.1595 6.531 3.7707
Inulin 147.1874 15.0255 8.675
BSA 138.8893 3.9494 2.2802
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 89.0778 1.256 0.7252
2h WAT 76.3467 5.8706 3.3894
4h WAT 66.1984 2.1848 1.2614
8h WAT 69.3234 15.0634 8.6969
16h WAT 75.2326 3.8715 2.2352
24h WAT 75.4955 16.5806 9.5728
WAT hyphal knot -30h 76.8361 2.9528 1.7048
WAT hyphal knot -22h 96.8172 5.7219 3.3035
WAT hyphal knot -15h 82.9615 7.8102 4.5092
WAT hyphal knot -7.5h 72.2288 15.9552 9.2117
WAT hyphal knot 87.0851 9.3332 5.3885
WAT hyphal knot +7.5h 78.8416 8.7134 5.0307
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 103.2559 35.7813 20.6583
Straw 3h 117.9303 15.4993 8.9485
Straw 6h 73.9646 20.9236 12.0802
Straw 12h 108.2943 17.0231 9.8283
Straw 24h 106.4134 26.5724 15.3416
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 59.9819 5.4711 3.1588
Frost (-20C, 30min) 37.2714 5.2066 3.006
Heat shock (47C, 2h) 161.3035 15.2073 8.7799
High CO2 59.3964 7.298 4.2135
Drought (4% agar, 12h) 59.4694 8.805 5.0836
Oxidative (1mM H2O2, 3h) 60.7081 3.6778 2.1234
Acidic (pH4, 3h) 50.9687 7.5968 4.386
Alkaline (pH9, 3h) 45.2396 2.8752 1.66
Osmotic (sorbitol 2h) 37.5292 6.501 3.7533
CongoRed (3h) 50.7941 9.9409 5.7394
Cobalt chloride control 66.5248 2.189 1.2638
Cobalt chloride 2mM 64.0598 5.9454 3.4326
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 58.8624 13.2234 7.6345
Cold stimulation 56.8493 23.3103 13.4582
Scratched surface 68.5279 11.6705 6.738
Ca2+, 200mM, 24h 38.2429 7.8478 4.5309
Cu2+, 2mM, 6h 73.4617 5.4957 3.1729
Voriconazole 49.6866 17.2045 9.933
Trichoderma interaction, early 62.693 15.0101 8.6661
Trichoderma interaction 60h 70.6198 17.3991 10.0454
Cobalt chloride 2mM repeat 73.9016 11.6853 6.7465
Hypoxia 59.0076 13.3624 7.7148
Hypoxia control 64.6845 13.2676 7.66
Protoplastation control 64.1025 21.9594 15.5276
Protoplastation 3.5h 98.3313 8.8352 6.2474
Protoplastation 1.5h 116.8636 34.4987 24.3942

General data

Systematic name -
Protein id CopciAB_399478.T0
Description Camk camkl kin4 protein kinase

Annotation summary

0 300 600 900 1200 1201

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00069 Protein kinase domain IPR000719 122 382
Pfam PF02149 Kinase associated domain 1 IPR001772 1155 1193

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR001772 Kinase associated domain 1 (KA1)
IPR011009 Protein kinase-like domain superfamily
IPR028375 KA1 domain/Ssp2, C-terminal
IPR017441 Protein kinase, ATP binding site
IPR000719 Protein kinase domain
IPR008271 Serine/threonine-protein kinase, active site

GO

Go id Term Ontology
GO:0005524 ATP binding MF
GO:0004672 protein kinase activity MF
GO:0006468 protein phosphorylation BP

KEGG

KEGG Orthology
K08286

EggNOG

COG category Description
T Camk camkl kin4 protein kinase

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_399478 across fungi.

Arrow shows the origin of gene family containing CopciAB_399478.

Protein

Sequence id CopciAB_399478.T0
Sequence >CopciAB_399478.T0
MAPPSQSTSLQIPPADTERGSSRQAAHNSPAHPGSASAYRPASVAVHSATPSSSHAGSSSSRRQQRASHSVVSGT
SNDHDRRNGHSRHEGSPYPDVYSHPAAVAYAAAHPRRTIPKFGPYLLLQTLGEGEFGKVKLGLHCQWGEEVAVKL
IRRGNVDSSVRMSKVEREIEVLRTLKHPNIVRLYDVIETDKYIGIILEYASGGELFDHILAHRHLRERDAAKLFS
QLISGVWYIHQKKIVHRDLKLENLLLDRHRNVIITDFGFANRFEHRSDDLMQTSCGSPCYAAPELVISEGLYVGS
AVDIWSCGVILYAMLAGYLPFDDDPANPDGDNINLLYRYIVNTPLSFPDFVSAEARDLLSLMLVPDPTRRANLDT
VMRHPWLSAYHGTPRTDGVPNAFGKSVADLEKAAMEQHQQKRIAYQKQMKANAVLNNTSAPSPRSHSHRPEPTSA
APTSGRSRSVQPEFIYDSSVDQSISAPVPSANANATPKHNGTTPKAFDSPAALGLADDDPFAPPPGTKVNSGVAT
ATSPSKQRPSEDSARTPAAGLSPTDNKTPSKGHRSSTSGGGRDIRHTIQVEYDEPKSARRSDDKRRDRSGSQGQP
SQASAQPNGVLPNVQNGQPATRERRPSHGGATKPLPPQPVAPSAYKPPPTPATPKGSSHQQPSATPVKAASGGDV
PTVNVSSPPQTPSFHQLSHPKDKDKDASSQNSASSKRGHKKGKSSIDKIGLGKIFGSGNSAPAPPVPPLNGSEHN
LQSPSAPSSRVPSESQGSASSLQAPQEPAPPKDGKKSRRNTLTVMVEPFIGTIRNRKGRPPTTPATAEPVPTAQT
PVNATHPPVPSSATVPALPTAPHDADLTHPDIPVEDGPGLSASSNKAKKVMQWFRTKSKGRESVGIGLGGEAEHH
DSLSTPITEQKYKKGFSASSSTVNQTSTPASAMSPQVVVTQAQQATTPKTPKVSAPGHPQRAASSATETPSFVAR
FRNSVTVGGGSHSHSSKHSNQPGGQLRIHQGAVDQTTITTRPPPEVMAKVKAVLEGMGVEIQLESEYKYRCIRHK
KKKGATSAAGTAPNGAPANLAAVQVTGSAASNGVDRRGLPLPSPSAFSATGGMLRGLLMRRQSSQVSSSSQPSLA
FDDETSVVVSEPLLMSDITYGDPSQDAGDEVRFSVELTRIDRLNDTYSLDIRRLKGNLRSYKYLYDTIRQRADLQ
R
Length 1201

Coding

Sequence id CopciAB_399478.T0
Sequence >CopciAB_399478.T0
ATGGCGCCGCCGTCCCAATCGACCAGCTTGCAGATACCTCCAGCAGATACAGAACGGGGATCGTCGAGGCAGGCA
GCGCACAACTCCCCAGCGCATCCAGGGTCGGCCTCAGCTTACCGCCCAGCGTCGGTAGCAGTGCACTCAGCAACC
CCCTCTTCAAGCCATGCAGGATCCAGTTCCTCAAGACGCCAACAGCGCGCATCGCACAGCGTAGTCTCAGGAACA
TCCAACGACCACGACCGTCGCAATGGCCATTCACGACATGAAGGCTCGCCGTACCCGGATGTTTACTCGCACCCA
GCTGCTGTTGCTTACGCAGCCGCCCACCCCCGCCGAACTATCCCTAAATTCGGACCCTATCTGTTGCTGCAGACC
CTTGGAGAAGGAGAGTTCGGCAAGGTGAAGCTGGGCTTGCATTGCCAATGGGGAGAAGAGGTCGCCGTTAAGCTC
ATTCGACGTGGAAACGTTGACAGCAGTGTTCGCATGTCCAAGGTCGAACGCGAAATTGAAGTCCTCAGAACCCTG
AAGCACCCCAACATTGTCCGACTCTACGATGTGATTGAAACCGATAAGTACATCGGCATTATCCTCGAATACGCT
TCTGGTGGAGAGCTATTCGACCATATTCTTGCCCACCGTCATCTGCGCGAACGAGACGCGGCCAAACTCTTCTCT
CAACTCATCTCCGGCGTGTGGTACATCCACCAAAAGAAGATCGTCCACCGCGACCTCAAATTGGAGAACCTTCTC
CTCGACCGTCACCGCAATGTCATCATCACCGATTTCGGTTTCGCAAACCGTTTCGAGCACAGGTCCGATGACCTG
ATGCAAACCTCCTGTGGTAGTCCGTGTTACGCTGCTCCGGAACTTGTCATCAGCGAAGGACTCTATGTCGGTAGC
GCTGTGGATATCTGGAGTTGTGGTGTCATTCTCTACGCGATGTTGGCGGGCTATCTCCCCTTTGATGACGACCCA
GCAAACCCCGATGGCGACAACATCAACCTTTTGTACCGATACATCGTCAACACACCCCTGTCGTTCCCCGATTTC
GTCTCTGCAGAAGCCCGAGACTTGCTCAGTCTCATGCTGGTTCCGGACCCCACCCGTCGAGCCAACCTGGACACG
GTGATGCGCCATCCATGGCTATCAGCCTACCATGGGACCCCTCGCACTGACGGGGTTCCTAATGCCTTTGGCAAG
TCGGTTGCTGACCTTGAGAAGGCAGCGATGGAGCAACACCAGCAGAAACGCATTGCTTACCAAAAGCAGATGAAG
GCAAATGCTGTTCTGAACAACACTTCGGCTCCCTCACCCCGCAGCCACAGCCATCGTCCCGAGCCAACGAGCGCC
GCCCCTACGTCCGGCCGGAGCCGCTCAGTACAGCCCGAGTTCATCTACGACTCCTCTGTTGATCAGTCGATATCC
GCCCCAGTTCCAAGCGCCAATGCCAATGCTACGCCGAAGCACAACGGAACAACTCCCAAGGCCTTTGACAGCCCC
GCAGCACTTGGTTTGGCGGATGACGATCCTTTTGCACCTCCCCCCGGCACCAAGGTAAACAGCGGTGTCGCCACC
GCCACATCTCCTTCGAAGCAACGTCCCTCAGAAGATTCTGCTCGAACGCCTGCTGCAGGTCTATCGCCCACCGAC
AACAAGACCCCGTCCAAGGGTCACAGATCGAGCACGAGCGGTGGCGGAAGGGACATCCGTCACACCATCCAGGTC
GAGTACGACGAGCCGAAGAGTGCCAGGAGGAGCGACGACAAAAGACGAGATAGAAGCGGCAGTCAAGGACAGCCA
AGCCAAGCTAGTGCTCAGCCCAACGGTGTTCTTCCCAATGTCCAGAATGGACAGCCGGCGACTAGAGAGAGGCGA
CCATCTCATGGTGGTGCTACCAAGCCTCTTCCACCACAGCCCGTCGCTCCCTCCGCTTACAAACCCCCGCCGACG
CCAGCCACGCCTAAGGGCTCGTCGCACCAGCAGCCGAGTGCGACTCCCGTCAAGGCTGCTTCTGGAGGCGACGTG
CCAACCGTCAACGTTTCTTCGCCCCCACAGACGCCTTCTTTTCACCAGCTCTCCCACCCGAAAGACAAGGATAAA
GACGCCAGTAGCCAAAACTCCGCCTCCTCAAAACGAGGTCACAAAAAGGGCAAGTCTAGCATCGACAAAATAGGT
CTCGGCAAGATCTTTGGAAGCGGAAACAGTGCTCCTGCTCCCCCGGTCCCTCCCCTGAACGGCAGCGAGCATAAC
CTCCAATCCCCTAGTGCTCCATCTTCTCGTGTTCCTTCCGAAAGCCAGGGTAGCGCCTCTTCACTTCAAGCTCCT
CAGGAACCGGCGCCGCCCAAGGATGGGAAGAAAAGCCGTCGCAACACTTTGACAGTGATGGTCGAGCCTTTTATT
GGCACTATCCGAAACCGCAAGGGACGTCCTCCCACCACTCCCGCTACCGCTGAGCCCGTACCAACTGCCCAGACG
CCCGTCAATGCGACACACCCACCTGTCCCCTCTTCGGCGACCGTTCCTGCACTCCCCACCGCCCCGCACGATGCC
GACCTTACTCATCCGGATATTCCTGTCGAAGACGGCCCTGGATTGTCAGCATCGAGTAACAAAGCCAAGAAGGTC
ATGCAGTGGTTCCGAACCAAGTCGAAGGGGCGTGAATCTGTCGGCATTGGATTGGGCGGTGAAGCCGAGCACCAC
GATTCTCTGAGCACGCCCATAACTGAACAGAAATACAAGAAGGGATTCTCCGCGTCGAGCAGCACCGTCAACCAA
ACCTCGACACCTGCATCTGCCATGTCGCCTCAGGTGGTTGTCACACAGGCACAGCAGGCTACCACGCCTAAGACT
CCCAAGGTTTCCGCTCCCGGTCATCCCCAGCGGGCTGCTAGCTCCGCTACCGAAACCCCCAGTTTCGTCGCTCGG
TTCCGCAACTCAGTTACAGTCGGTGGCGGCTCCCATTCGCACTCATCCAAGCACTCGAACCAACCTGGGGGCCAA
CTGCGTATTCACCAGGGTGCTGTGGACCAGACCACCATTACTACGAGGCCACCACCCGAGGTTATGGCCAAAGTC
AAGGCCGTGTTGGAGGGGATGGGTGTTGAGATTCAGCTGGAGAGCGAGTACAAGTACAGGTGCATCCGTCACAAG
AAGAAGAAGGGGGCGACTAGTGCTGCGGGAACTGCTCCCAACGGTGCTCCAGCTAACCTCGCTGCTGTACAAGTC
ACCGGCAGCGCTGCTTCGAATGGGGTTGATCGCCGTGGCCTGCCGCTTCCATCTCCTTCGGCTTTCTCTGCCACT
GGTGGCATGTTGCGAGGATTGCTCATGAGGCGACAGTCGTCCCAAGTTTCGTCTTCGTCGCAACCCTCACTCGCC
TTCGACGACGAGACTTCCGTCGTGGTCAGCGAACCATTGCTCATGTCCGACATTACCTACGGTGATCCCTCTCAA
GATGCGGGTGACGAAGTTCGCTTCTCGGTCGAGCTTACTCGAATTGATCGTTTGAACGATACCTACTCCCTCGAC
ATTCGTCGACTCAAGGGTAACCTCCGAAGCTACAAGTATCTGTACGATACCATTAGACAACGGGCTGATCTACAA
CGCTAG
Length 3606

Transcript

Sequence id CopciAB_399478.T0
Sequence >CopciAB_399478.T0
CCTTAGTTTCCCTCCCCGTCACCGAGTCCCGTATTCAACATCTTCCTCGTCGTTGACGGTGACGACAACGACCTC
GACCACATAAAACATCCAGCACATTTTCCCCCTCTCTTGTCGACGAGGTCAACACCCTTCTGATGGCGCCGCCGT
CCCAATCGACCAGCTTGCAGATACCTCCAGCAGATACAGAACGGGGATCGTCGAGGCAGGCAGCGCACAACTCCC
CAGCGCATCCAGGGTCGGCCTCAGCTTACCGCCCAGCGTCGGTAGCAGTGCACTCAGCAACCCCCTCTTCAAGCC
ATGCAGGATCCAGTTCCTCAAGACGCCAACAGCGCGCATCGCACAGCGTAGTCTCAGGAACATCCAACGACCACG
ACCGTCGCAATGGCCATTCACGACATGAAGGCTCGCCGTACCCGGATGTTTACTCGCACCCAGCTGCTGTTGCTT
ACGCAGCCGCCCACCCCCGCCGAACTATCCCTAAATTCGGACCCTATCTGTTGCTGCAGACCCTTGGAGAAGGAG
AGTTCGGCAAGGTGAAGCTGGGCTTGCATTGCCAATGGGGAGAAGAGGTCGCCGTTAAGCTCATTCGACGTGGAA
ACGTTGACAGCAGTGTTCGCATGTCCAAGGTCGAACGCGAAATTGAAGTCCTCAGAACCCTGAAGCACCCCAACA
TTGTCCGACTCTACGATGTGATTGAAACCGATAAGTACATCGGCATTATCCTCGAATACGCTTCTGGTGGAGAGC
TATTCGACCATATTCTTGCCCACCGTCATCTGCGCGAACGAGACGCGGCCAAACTCTTCTCTCAACTCATCTCCG
GCGTGTGGTACATCCACCAAAAGAAGATCGTCCACCGCGACCTCAAATTGGAGAACCTTCTCCTCGACCGTCACC
GCAATGTCATCATCACCGATTTCGGTTTCGCAAACCGTTTCGAGCACAGGTCCGATGACCTGATGCAAACCTCCT
GTGGTAGTCCGTGTTACGCTGCTCCGGAACTTGTCATCAGCGAAGGACTCTATGTCGGTAGCGCTGTGGATATCT
GGAGTTGTGGTGTCATTCTCTACGCGATGTTGGCGGGCTATCTCCCCTTTGATGACGACCCAGCAAACCCCGATG
GCGACAACATCAACCTTTTGTACCGATACATCGTCAACACACCCCTGTCGTTCCCCGATTTCGTCTCTGCAGAAG
CCCGAGACTTGCTCAGTCTCATGCTGGTTCCGGACCCCACCCGTCGAGCCAACCTGGACACGGTGATGCGCCATC
CATGGCTATCAGCCTACCATGGGACCCCTCGCACTGACGGGGTTCCTAATGCCTTTGGCAAGTCGGTTGCTGACC
TTGAGAAGGCAGCGATGGAGCAACACCAGCAGAAACGCATTGCTTACCAAAAGCAGATGAAGGCAAATGCTGTTC
TGAACAACACTTCGGCTCCCTCACCCCGCAGCCACAGCCATCGTCCCGAGCCAACGAGCGCCGCCCCTACGTCCG
GCCGGAGCCGCTCAGTACAGCCCGAGTTCATCTACGACTCCTCTGTTGATCAGTCGATATCCGCCCCAGTTCCAA
GCGCCAATGCCAATGCTACGCCGAAGCACAACGGAACAACTCCCAAGGCCTTTGACAGCCCCGCAGCACTTGGTT
TGGCGGATGACGATCCTTTTGCACCTCCCCCCGGCACCAAGGTAAACAGCGGTGTCGCCACCGCCACATCTCCTT
CGAAGCAACGTCCCTCAGAAGATTCTGCTCGAACGCCTGCTGCAGGTCTATCGCCCACCGACAACAAGACCCCGT
CCAAGGGTCACAGATCGAGCACGAGCGGTGGCGGAAGGGACATCCGTCACACCATCCAGGTCGAGTACGACGAGC
CGAAGAGTGCCAGGAGGAGCGACGACAAAAGACGAGATAGAAGCGGCAGTCAAGGACAGCCAAGCCAAGCTAGTG
CTCAGCCCAACGGTGTTCTTCCCAATGTCCAGAATGGACAGCCGGCGACTAGAGAGAGGCGACCATCTCATGGTG
GTGCTACCAAGCCTCTTCCACCACAGCCCGTCGCTCCCTCCGCTTACAAACCCCCGCCGACGCCAGCCACGCCTA
AGGGCTCGTCGCACCAGCAGCCGAGTGCGACTCCCGTCAAGGCTGCTTCTGGAGGCGACGTGCCAACCGTCAACG
TTTCTTCGCCCCCACAGACGCCTTCTTTTCACCAGCTCTCCCACCCGAAAGACAAGGATAAAGACGCCAGTAGCC
AAAACTCCGCCTCCTCAAAACGAGGTCACAAAAAGGGCAAGTCTAGCATCGACAAAATAGGTCTCGGCAAGATCT
TTGGAAGCGGAAACAGTGCTCCTGCTCCCCCGGTCCCTCCCCTGAACGGCAGCGAGCATAACCTCCAATCCCCTA
GTGCTCCATCTTCTCGTGTTCCTTCCGAAAGCCAGGGTAGCGCCTCTTCACTTCAAGCTCCTCAGGAACCGGCGC
CGCCCAAGGATGGGAAGAAAAGCCGTCGCAACACTTTGACAGTGATGGTCGAGCCTTTTATTGGCACTATCCGAA
ACCGCAAGGGACGTCCTCCCACCACTCCCGCTACCGCTGAGCCCGTACCAACTGCCCAGACGCCCGTCAATGCGA
CACACCCACCTGTCCCCTCTTCGGCGACCGTTCCTGCACTCCCCACCGCCCCGCACGATGCCGACCTTACTCATC
CGGATATTCCTGTCGAAGACGGCCCTGGATTGTCAGCATCGAGTAACAAAGCCAAGAAGGTCATGCAGTGGTTCC
GAACCAAGTCGAAGGGGCGTGAATCTGTCGGCATTGGATTGGGCGGTGAAGCCGAGCACCACGATTCTCTGAGCA
CGCCCATAACTGAACAGAAATACAAGAAGGGATTCTCCGCGTCGAGCAGCACCGTCAACCAAACCTCGACACCTG
CATCTGCCATGTCGCCTCAGGTGGTTGTCACACAGGCACAGCAGGCTACCACGCCTAAGACTCCCAAGGTTTCCG
CTCCCGGTCATCCCCAGCGGGCTGCTAGCTCCGCTACCGAAACCCCCAGTTTCGTCGCTCGGTTCCGCAACTCAG
TTACAGTCGGTGGCGGCTCCCATTCGCACTCATCCAAGCACTCGAACCAACCTGGGGGCCAACTGCGTATTCACC
AGGGTGCTGTGGACCAGACCACCATTACTACGAGGCCACCACCCGAGGTTATGGCCAAAGTCAAGGCCGTGTTGG
AGGGGATGGGTGTTGAGATTCAGCTGGAGAGCGAGTACAAGTACAGGTGCATCCGTCACAAGAAGAAGAAGGGGG
CGACTAGTGCTGCGGGAACTGCTCCCAACGGTGCTCCAGCTAACCTCGCTGCTGTACAAGTCACCGGCAGCGCTG
CTTCGAATGGGGTTGATCGCCGTGGCCTGCCGCTTCCATCTCCTTCGGCTTTCTCTGCCACTGGTGGCATGTTGC
GAGGATTGCTCATGAGGCGACAGTCGTCCCAAGTTTCGTCTTCGTCGCAACCCTCACTCGCCTTCGACGACGAGA
CTTCCGTCGTGGTCAGCGAACCATTGCTCATGTCCGACATTACCTACGGTGATCCCTCTCAAGATGCGGGTGACG
AAGTTCGCTTCTCGGTCGAGCTTACTCGAATTGATCGTTTGAACGATACCTACTCCCTCGACATTCGTCGACTCA
AGGGTAACCTCCGAAGCTACAAGTATCTGTACGATACCATTAGACAACGGGCTGATCTACAACGCTAGATGAGCT
TTGCAGGATCTTCAATTCCCCCCGATACGCATCGATAACCAGGCGTTTCCATTCGATTTGGTTCGAGTTCTCAAC
TCTGACATGCTTAATTCTTTGACTGTCGGCCAGCCTTTCCACGGTACCTTATAACTTCATACCCTAATATTTGAC
CTCTGCGCTTTTGGAGCGATCCCGCTTTTCCAATCTCCCTGTCATATTTTCTTAATATTCCAAATCATTCTCCCT
TCTTTGTGTTTCTCAAGTCATCCGGATCCACTCGCACTTCTTTGCAGATTCCATTGTGCTTCGTGTATCAGCTGT
CCGCTTTTCATTTCCTTTCGCTTGATTCTTCGTTTCTATTTGAACGTCGCTGTTTTACTATCTACACCATTTCTT
CTATTCCCCCTTCTTCCTTTGTAAGTACTGGCACTTCTACTACCCTTTCTATCCCCCGATGATTTCTCGTCCCCC
TTTTACCTCCAATGACTCGGCTCTTCCTCACCGCCATCCAGTCCAAGCTCCGTCACTTCTACACCTGGTCGCTTC
TTTTTCATCTCTATTCACTTCTTCATTGATTTCATTCGTCCCTCCGAATTACCTCTCCATCCTAAGGTTTTTACG
TGGCAGCGTAGACGACCGCCTCGTGCACGAAATGTACATTATAATTTTATCTCCAAATTTCTATCTTCCTTTTCA
TTTC
Length 4429

Gene

Sequence id CopciAB_399478.T0
Sequence >CopciAB_399478.T0
CCTTAGTTTCCCTCCCCGTCACCGAGTCCCGTATTCAACATCTTCCTCGTCGTTGACGGTGACGACAACGACCTC
GACCACATAAAACATCCAGCACAGTCTGTATATCCAGTCGTCGTCGCCGTGATCTACCCGTTGACACGTCGTTGC
CGCAGTTTTCCCCCTCTCTTGTCGACGAGGTCAACACCCTTCTGATGGCGCCGCCGTCCCAATCGACCAGCTTGC
AGATACCTCCAGCAGATACAGAACGGGGATCGTCGAGGCAGGCAGCGCACAACTCCCCAGCGCATCCAGGGTCGG
CCTCAGCTTACCGCCCAGCGTCGGTAGCAGTGCACTCAGCAACCCCCTCTTCAAGCCATGCAGGATCCAGTTCCT
CAAGACGCCAACAGCGCGCATCGCACAGCGTAGTCTCAGGAACATCCAACGACCACGACCGTCGCAATGGCCATT
CACGACATGAAGGCTCGCCGTACCCGGATGTTTACTCGCACCCAGCTGCTGTTGCTTACGCAGCCGCCCACCCCC
GCCGAACTATCCCTAAATTCGGACCCTATCTGTTGCTGCAGACCCTTGGAGAAGGAGAGTTCGGCAAGGTGAAGC
TGGGCTTGCATTGCCAATGGGGAGAAGAGGTCGCCGTTAAGCTCATTCGACGTGGAAACGTTGACAGCAGTGTTC
GCATGTCCAAGGTCGAACGCGAAATTGAAGTCCTCAGAGTAAGTTAACCTCGTATCGAACGTGGATGCCTTCTGA
CTCTGGATCTAGACCCTGAAGCACCCCAACATTGTCCGACTCTACGATGTGATTGAAACCGATAAGTACATCGGC
ATTATCCTCGAATACGCTTCTGGTGGAGAGCTATTCGACCATATTCTTGCCCACCGTCATCTGCGCGAACGAGAC
GCGGCCAAACTCTTCTCTCAACTCATCTCCGGCGTGTGGTACATCCACCAAAAGAAGATCGTCCACCGCGACCTC
AAATTGGAGAACCTTCTCCTCGACCGTCACCGCAATGTCATCATCACCGATTTCGGTTTCGCAAACCGTTTCGAG
CACAGGTCCGATGACCTGATGCAAACCTCCTGTGGTAGTCCGTGTTACGCTGCTCCGGAACTTGTCATCAGCGAA
GGACTCTATGTCGGTAGCGCTGTGGATATCTGGAGTTGTGGTGTCATTCTCTACGCGATGTTGGCGGGCTATCTC
CCCTTTGATGACGACCCAGCAAACCCCGATGGCGACAACATCAACCTTTTGTACCGATACATCGTCAACACACCC
CTGTCGTTCCCCGATTTCGTCTCTGCAGAAGCCCGAGACTTGCTCAGTCTCATGCTGGTTCCGGACCCCACCCGT
CGAGCCAACCTGGACACGGTGATGCGCCATCCATGGCTATCAGCCTACCATGGGACCCCTCGCACTGACGGGGTT
CCTAATGCCTTTGGCAAGTCGGTTGCTGACCTTGAGAAGGCAGCGATGGAGCAACACCAGCAGAAACGCATTGCT
TACCAAAAGCAGATGAAGGCAAATGCTGTTCTGAACAACACTTCGGCTCCCTCACCCCGCAGCCACAGCCATCGT
CCCGAGCCAACGAGCGCCGCCCCTACGTCCGGCCGGAGCCGCTCAGTACAGCCCGAGTTCATCTACGACTCCTCT
GTTGATCAGTCGATATCCGCCCCAGTTCCAAGCGCCAATGCCAATGCTACGCCGAAGCACAACGGAACAACTCCC
AAGGCCTTTGACAGCCCCGCAGCACTTGGTTTGGCGGATGACGATCCTTTTGCACCTCCCCCCGGCACCAAGGTA
AACAGCGGTGTCGCCACCGCCACATCTCCTTCGAAGCAACGTCCCTCAGAAGATTCTGCTCGAACGCCTGCTGCA
GGTCTATCGCCCACCGACAACAAGACCCCGTCCAAGGGTCACAGATCGAGCACGAGCGGTGGCGGAAGGGACATC
CGTCACACCATCCAGGTCGAGTACGACGAGCCGAAGAGTGCCAGGAGGAGCGACGACAAAAGACGAGATAGAAGC
GGCAGTCAAGGACAGCCAAGCCAAGCTAGTGCTCAGCCCAACGGTGTTCTTCCCAATGTCCAGAATGGACAGCCG
GCGACTAGAGAGAGGCGACCATCTCATGGTGGTGCTACCAAGCCTCTTCCACCACAGCCCGTCGCTCCCTCCGCT
TACAAACCCCCGCCGACGCCAGCCACGCCTAAGGGCTCGTCGCACCAGCAGCCGAGTGCGACTCCCGTCAAGGCT
GCTTCTGGAGGCGACGTGCCAACCGTCAACGTTTCTTCGCCCCCACAGACGCCTTCTTTTCACCAGCTCTCCCAC
CCGAAAGACAAGGATAAAGACGCCAGTAGCCAAAACTCCGCCTCCTCAAAACGAGGTCACAAAAAGGGCAAGTCT
AGCATCGACAAAATAGGTCTCGGCAAGATCTTTGGAAGCGGAAACAGTGCTCCTGCTCCCCCGGTCCCTCCCCTG
AACGGCAGCGAGCATAACCTCCAATCCCCTAGTGCTCCATCTTCTCGTGTTCCTTCCGAAAGCCAGGGTAGCGCC
TCTTCACTTCAAGCTCCTCAGGAACCGGCGCCGCCCAAGGATGGGAAGAAAAGCCGTCGCAACACTTTGACAGTG
ATGGTCGAGCCTTTTATTGGCACTATCCGAAACCGCAAGGGACGTCCTCCCACCACTCCCGCTACCGCTGAGCCC
GTACCAACTGCCCAGACGCCCGTCAATGCGACACACCCACCTGTCCCCTCTTCGGCGACCGTTCCTGCACTCCCC
ACCGCCCCGCACGATGCCGACCTTACTCATCCGGATATTCCTGTCGAAGACGGCCCTGGATTGTCAGCATCGAGT
AACAAAGCCAAGAAGGTCATGCAGTGGTTCCGAACCAAGTCGAAGGGGCGTGAATCTGTCGGCATTGGATTGGGC
GGTGAAGCCGAGCACCACGATTCTCTGAGCACGCCCATAACTGAACAGAAATACAAGAAGGGATTCTCCGCGTCG
AGCAGCACCGTCAACCAAACCTCGACACCTGCATCTGCCATGTCGCCTCAGGTGGTTGTCACACAGGCACAGCAG
GCTACCACGCCTAAGACTCCCAAGGTTTCCGCTCCCGGTCATCCCCAGCGGGCTGCTAGCTCCGCTACCGAAACC
CCCAGTTTCGTCGCTCGGTTCCGCAACTCAGTTACAGTCGGTGGCGGCTCCCATTCGCACTCATCCAAGCACTCG
AACCAACCTGGGGGCCAACTGCGTATTCACCAGGGTGCTGTGGACCAGACCACCATTACTACGAGGCCACCACCC
GAGGTTATGGCCAAAGTCAAGGCCGTGTTGGAGGGGATGGGTGTTGAGATTCAGCTGGAGAGCGAGTACAAGTAC
AGGTGCATCCGTCACAAGAAGAAGAAGGGGGCGACTAGTGCTGCGGGAACTGCTCCCAACGGTGCTCCAGCTAAC
CTCGCTGCTGTACAAGTCACCGGCAGCGCTGCTTCGAATGGGGTGAGTAATTCAAATGTTGTTTAATCCACTTTC
TGTCCTGACGATGATTATGTAGGTTGATCGCCGTGGCCTGCCGCTTCCATCTCCTTCGGCTTTCTCTGCCACTGG
TGGCATGTTGCGAGGATTGCTCATGAGGCGACAGTCGTCCCAAGTTTCGTCTTCGTCGCAACCCTCACTCGCCTT
CGACGACGAGACTTCCGTCGTGGTCAGCGAACCATTGCTCATGTCCGACATTACCTACGGTGATCCCTCTCAAGA
TGCGGGTGACGAAGTTCGCTTCTCGGTCGAGCTTACTCGAATTGATCGTTTGAACGATACCTACTCCCTCGACAT
TCGTCGACTCAAGGGTAACCTCCGAAGCTACAAGTATCTGTACGATACCATTAGACAGTAAGCCTATCTGTCTTC
CGTCTGGCCGTCCATTTGATTAACGCTTTCTATCTAGACGGGCTGATCTACAACGCTAGATGAGCTTTGCAGGAT
CTTCAATTCCCCCCGATACGCATCGATAACCAGGCGTTTCCATTCGATTTGGTTCGAGTTCTCAACTCTGACATG
CTTAATTCTTTGACTGTCGGCCAGCCTTTCCACGGTACCTTATAACTTCATACCCTAATATTTGACCTCTGCGCT
TTTGGAGCGATCCCGCTTTTCCAATCTCCCTGTCATATTTTCTTAATATTCCAAATCATTCTCCCTTCTTTGTGT
TTCTCAAGTCATCCGGATCCACTCGCACTTCTTTGCAGATTCCATTGTGCTTCGTGTATCAGCTGTCCGCTTTTC
ATTTCCTTTCGCTTGATTCTTCGTTTCTATTTGAACGTCGCTGTTTTACTATCTACACCATTTCTTCTATTCCCC
CTTCTTCCTTTGTAAGTACTGGCACTTCTACTACCCTTTCTATCCCCCGATGATTTCTCGTCCCCCTTTTACCTC
CAATGACTCGGCTCTTCCTCACCGCCATCCAGTCCAAGCTCCGTCACTTCTACACCTGGTCGCTTCTTTTTCATC
TCTATTCACTTCTTCATTGATTTCATTCGTCCCTCCGAATTACCTCTCCATCCTAAGGTTTTTACGTGGCAGCGT
AGACGACCGCCTCGTGCACGAAATGTACATTATAATTTTATCTCCAAATTTCTATCTTCCTTTTCATTTC
Length 4645