CopciAB_405337
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_405337 Strain Coprinopsis cinerea Okayama 7
Standard name GIN4 Synonyms 405337
Uniprot id Functional description Serine/Threonine protein kinases, catalytic domain
Location scaffold_8:1591041..1594999 Strand +
Gene length (nt) 3959 Transcript length (nt) 3807
CDS length (nt) 3288 Protein length (aa) 1095

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7269950 45.7 5.789E-284 898
Hypsizygus marmoreus strain 51987-8 Hypma_RDB27944 44.2 1.58E-270 859
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_179815 43.8 6.209E-254 810
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_108248 43.8 6.47E-254 810
Schizophyllum commune H4-8 Schco3_2693043 45.2 1.551E-218 707
Lentinula edodes W1-26 v1.0 Lentinedodes1_5721 37.8 7.255E-216 699
Lentinula edodes B17 Lened_B_1_1_9660 38.4 1.268E-215 698
Grifola frondosa Grifr_OBZ67823 43.8 2.326E-206 671
Pleurotus eryngii ATCC 90797 Pleery1_340616 52 7.121E-201 655
Pleurotus ostreatus PC15 PleosPC15_2_1053218 74.4 6.345E-200 652
Pleurotus ostreatus PC9 PleosPC9_1_98890 78.3 5.283E-162 540
Ganoderma sp. 10597 SS1 v1.0 Gansp1_57189 74.9 5.925E-161 537
Lentinula edodes NBRC 111202 Lenedo1_1159006 75.1 6.766E-159 531
Auricularia subglabra Aurde3_1_1229635 57 6.678E-131 448

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 4.6792 0.5927 0.3422
oidia 6.0098 0.1107 0.0639
vegetative_mycelium 7.5637 0.852 0.4919
primordia 73.7137 6.9562 4.0162
hyphal_knot 8.2796 0.9206 0.5315
young_fruiting_body 813.7111 67.4536 38.9444
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 7.1851 1.2433 0.7178
Wheat bran 2.9131 0.3224 0.1862
Horse manure 7.7722 0.3453 0.1993
Oak leaves 7.1128 1.0792 0.6231
Hay 5.0802 2.0084 1.1595
Corn stalk 5.2845 0.3513 0.2028
Pectine 6.9642 0.8777 0.5068
Microcrystalline cellulose 7.4104 0.768 0.4434
Xylose 8.5645 0.3484 0.2011
Cellobiose 8.2138 4.5938 2.6522
Lignin 7.8699 2.6533 1.5319
Apple peels 4.0262 0.0855 0.0494
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 3.2083 0.4598 0.2655
Bsubtilis 2.8972 1.1909 0.6876
Ecoli 5.6362 0.192 0.1108
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 56.8476 32.5497 18.7926
BS 4h 4.5178 0.8111 0.4683
BS 8h 2.2084 0.5522 0.3188
BS 12h 1.6384 0.5057 0.292
Oidia 0 h 7.527 2.3738 1.3705
Oidia 18 h 2.694 1.0201 0.5889
Sclerotia 1.7205 0.949 0.5479
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 1.6171 0.1887 0.109
DM 36h 1.6832 0.3066 0.177
DM 60h 1.489 0.1771 0.1023
DM 84h 1.782 0.6627 0.3826
DM 108h 1.6068 0.4358 0.2516
DM 132h 1.3677 0.0694 0.0401
DM 156hAE 1.9736 0.1609 0.0929
ELI1hAE 1.5196 0.4131 0.2385
ELI2hAE 1.3887 0.3869 0.2234
LI2hAE 2.0099 0.799 0.4613
LI6hAE 2.3734 1.1967 0.6909
LI12hAE 1.4452 0.7751 0.4475
LI18hAE 2.7239 1.8462 1.0659
LI 24hAE 2.7004 0.9197 0.531
DM 156hAM 1.9072 0.6059 0.3498
ELI1hAM 1.9156 0.175 0.101
ELI2hAM 2.7779 0.6148 0.3549
LI2hAM 3.8338 2.0488 1.1829
LI6hAM 1.6887 0.8388 0.4843
LI12hAM 2.0588 1.8756 1.0829
LI18hAM 2.0552 0.0913 0.0527
LI 24hAM 1.4347 0.3231 0.1866
LI 24hHK 2.6575 0.8392 0.4845
L/D 6h 1.8014 0.5815 0.3357
L/D 12h 2.5755 0.4519 0.2609
L/D 18h 2.3756 0.6576 0.3797
L/D 24h 2.2837 0.5205 0.3005
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 3.773 0.1818 0.105
Hyphal knots 3.8703 1.1411 0.6588
Primordium 1 2.9579 0.4736 0.2734
Primordium 2 3.0713 0.8621 0.4977
Young Fruiting body cap 6.8561 3.0993 1.7894
Younf fruiting body gill 147.2421 136.8243 78.9956
Young fruiting body stipe 3.2524 1.1525 0.6654
Mature fruiting body cap_gill 52.1202 16.1451 9.3214
Mature fruiting body stipe 8.5213 1.6471 0.951
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 4.5275 0.9062 0.5232
NH4NO3 4.8599 0.7041 0.4065
Proline 3.7644 0.7665 0.4426
Tryptophan 3.5876 1.2914 0.7456
Isoleucin 3.4645 0.9106 0.5257
Arginine 4.648 0.909 0.5248
Metionine 5.816 0.2502 0.1445
NaNO3 4.3757 1.4774 0.853
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 4.5275 0.9062 0.5232
Citrus peel 2.9854 0.2123 0.1226
Poplar leaves 4.6788 0.951 0.5491
Typha leaves 4.7101 0.6595 0.3808
Overwintered Salix leaves 5.5076 1.6073 0.928
Reed flowering 3.8835 0.7263 0.4193
Tigernut 2.7231 0.0659 0.038
Energy cane 5.3378 1.605 0.9267
Guar gum 5.0446 0.7484 0.4321
Apple peels 9.5102 0.8589 0.4959
Cellobiose 6.7312 0.688 0.3972
Corn stalk 8.8957 1.4437 0.8335
Horse manure 7.5737 2.0085 1.1596
Lignin 5.825 2.1715 1.2537
Microcrystalline cellulose 7.1261 1.6319 0.9422
Oak leaves 6.4604 2.8479 1.6442
Pectin esterified 6.1144 0.123 0.071
Poplar sawdust 7.5744 0.5721 0.3303
Wheat bran 4.6323 1.577 0.9105
Chlamydomonas reinhardtii 4.2791 0.9789 0.5652
Vertatryl alcohol 7.4032 0.5425 0.3132
Furfural 3.0761 0.4863 0.2808
Autoclaved mycelium 3.8222 0.5373 0.3102
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 7.0224 0.2865 0.1654
Ribose 6.3444 2.4588 1.4196
Mannose 5.3727 1.9322 1.3663
Fructose 5.5869 0.9002 0.5197
Arabinose 7.9361 0.2904 0.1677
Xylose 6.4811 0.5782 0.3338
Galacturonic acid 7.6913 1.6723 0.9655
Rhamnogalacturonan 6.3371 0.5727 0.3306
Pectin esterified 7.4482 0.648 0.3741
Polygalacturonic acid 6.7129 0.2437 0.1407
Sodium acetate 5.6376 0.3728 0.2153
No nitrogen 6.1756 1.3656 0.7884
BSA 7.1584 1.4011 0.8089
Glutamine 6.0647 1.303 0.7523
No phosphate 5.5694 0.1361 0.0786
No carbon 6.9485 1.0473 0.7406
No sulphur 6.9439 0.1882 0.1087
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 4.5275 0.9062 0.5232
Amylose 3.4944 0.6003 0.3466
Fucose 3.3751 0.0592 0.0342
Galactose 3.6962 0.7917 0.4571
Lactose 3.9856 0.177 0.1022
Maltose 3.5907 0.5932 0.3425
Mannitol 3.6549 0.8014 0.4627
Rhamnose 3.8377 0.7104 0.4101
Sorbitol 5.0779 1.1202 0.6468
Trehalose 4.4205 0.2001 0.1155
Glycerol 3.6505 1.0417 0.6014
Glucuronic acid 3.2761 0.2703 0.1561
Arabinan 3.0116 0.6924 0.3998
Galactan 4.2343 1.424 0.8221
Galactomannan 3.1766 1.4124 0.8154
Glucan 4.682 2.2742 1.313
Xylan 3.7405 0.7445 0.4298
Xyloglucan 3.1725 0.1952 0.1127
Arabinogalactan 4.3043 0.7358 0.4248
Pectin 13.9702 8.7178 5.0332
Rhamnogalacturonan 23.0508 2.508 1.448
Polygalacturonic acid 3.4749 0.3707 0.214
Mannan 4.2797 1.1088 0.6402
Amylopectin 3.244 1.1881 0.686
Inulin 3.9441 0.2854 0.1648
BSA 3.6786 1.2838 0.7412
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 1.489 0.1771 0.1023
2h WAT 1.5163 0.6801 0.3927
4h WAT 3.336 0.8602 0.4966
8h WAT 1.301 1.1295 0.6521
16h WAT 1.664 1.2596 0.7272
24h WAT 2.5635 0.1137 0.0656
WAT hyphal knot -30h 2.3145 0.0972 0.0561
WAT hyphal knot -22h 2.612 0.6112 0.3529
WAT hyphal knot -15h 2.3893 1.1069 0.6391
WAT hyphal knot -7.5h 2.2856 1.0665 0.6157
WAT hyphal knot 1.5238 0.979 0.5652
WAT hyphal knot +7.5h 1.7114 0.8258 0.4768
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 5.1148 0.9813 0.5665
Straw 3h 4.4439 1.178 0.6801
Straw 6h 4.6041 0.9618 0.5553
Straw 12h 7.7771 1.5991 0.9232
Straw 24h 5.9139 2.3581 1.3614
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 1.9491 0.3691 0.2131
Frost (-20C, 30min) 1.8539 0.3832 0.2213
Heat shock (47C, 2h) 14.1382 0.3319 0.1916
High CO2 2.7038 1.7073 0.9857
Drought (4% agar, 12h) 3.2174 0.0911 0.0526
Oxidative (1mM H2O2, 3h) 6.5239 0.3699 0.2136
Acidic (pH4, 3h) 3.5169 1.0598 0.6119
Alkaline (pH9, 3h) 3.2827 0.781 0.4509
Osmotic (sorbitol 2h) 2.3767 1.3359 0.7713
CongoRed (3h) 2.458 1.1041 0.6375
Cobalt chloride control 2.2979 0.6242 0.3604
Cobalt chloride 2mM 2.9869 0.4203 0.2427
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 1.8879 1.6707 0.9646
Cold stimulation 2.2176 0.9631 0.5561
Scratched surface 2.4044 0.5315 0.3069
Ca2+, 200mM, 24h 3.426 2.8444 1.6422
Cu2+, 2mM, 6h 4.7642 2.7807 1.6054
Voriconazole 1.5106 0.9036 0.5217
Trichoderma interaction, early 2.3831 0.7694 0.4442
Trichoderma interaction 60h 6.7677 5.8259 3.3636
Cobalt chloride 2mM repeat 3.5206 1.4031 0.8101
Hypoxia 2.6798 0.8384 0.4841
Hypoxia control 2.4501 1.531 0.8839
Protoplastation control 2.3265 0.8313 0.5878
Protoplastation 3.5h 0.2552 0.3609 0.2552
Protoplastation 1.5h 0.1002 0.1417 0.1002

General data

Systematic name GIN4
Protein id CopciAB_405337.T0
Description Serine/Threonine protein kinases, catalytic domain

Annotation summary

0 300 600 900 1095

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00069 Protein kinase domain IPR000719 52 315

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR017441 Protein kinase, ATP binding site
IPR011009 Protein kinase-like domain superfamily
IPR000719 Protein kinase domain
IPR008271 Serine/threonine-protein kinase, active site

GO

Go id Term Ontology
GO:0005524 ATP binding MF
GO:0004672 protein kinase activity MF
GO:0006468 protein phosphorylation BP

KEGG

KEGG Orthology
K02515
K06668
K18679
K18680

EggNOG

COG category Description
D Serine/Threonine protein kinases, catalytic domain

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_405337 across fungi.

Arrow shows the origin of gene family containing CopciAB_405337.

Protein

Sequence id CopciAB_405337.T0
Sequence >CopciAB_405337.T0
MQNSQDSPPRAPPIQYNAPLGTRWAKEKAAAGGSAAFDLPSDPKSIGPWILGECIGKGASGRVKIARHQRTRQLA
AVKILPIAPLVNSRASLATQQAKSEKQRLGIDREITMMKLMNHPNIMRIYDVYEGEKELFLVLEYVEGGELFDFL
VNRGRLPPSEALLYFRQIIYGLNYAHTFSIIHRDLKPENILIASLDPPVVKIADWGMAAFAPPMLQLETSCGSPH
YASPEIVNGEKYFGTATDIWSCGVILYALLTGRLPFDDKNVRTLLSKVKSGKYDIPSWMDPMAKDLLTKMLVVDV
HKRITIPDILVHPWFVKGPTSTSQHTMDITLAQPPLPPSPSTLARPIASPDLIDPELFASLRIIWGRHADPDGAA
IQQDLCSPAGQGLHAKAFYFLLDRYREESLRNRSDDAADRIQTPRSETECQSDKLYLGWDLDQTRARRSLEAVVN
TSSPADKAVSPYRSTTPANEPFTADDPRSNELVLPTASRSAHQSIRHPMDTRKRQTTHSYSTTSTATSATRSTAS
SINTISPPRSAIPKRGYTHSMTHGQTRSSHEKRRATDPSIQSMPGTPIPTTRHPNLLGEDRSFLKELQRRASAVP
FHASVHPGRVPPPSLMDVDSSAVTLRQSMVERSDLRENVDRPGAVRTDVSVIPSDSHIHHRQSTRRRASLDAEKE
NAMAVDDGWTHVETESANAHSRPSPFGVTTNREVGRDVVNTPETTHSIPSAKTKKEKERKSRPPPIELPPIHQRR
TLVGSSFHTPSPGLHGGTGTAHTGSTSNRIMASPVVGEFKGWFSNLFNWKSHSAHPPASVFYSPEDIPKTREMTL
RFFQSLAFGISRVILDLNADSSEIYHCRLDQSVVDLATNTTLKPVRLRVEFSLVVPASPGPTTGGGTGAMTSSAG
TTPTPTPTTATSEFWTFTTGQLQQHAQQPLDPSSNTFLSAGTAGFGARATRNSLAALGRTASNAIGHHHQSHHHH
HHLHHHPTVNTTSATTTTSGGQGATVNANATALLSTHWEMPLGCACVIVMTFEKGSGSAFRAVKQRLQDMFSDSQ
VVGSGVGAGVGVGAGGGVGAGGGAVSPTCFSPVLTAGGGGDRMVM
Length 1095

Coding

Sequence id CopciAB_405337.T0
Sequence >CopciAB_405337.T0
ATGCAGAACAGTCAAGACAGCCCGCCTCGCGCACCTCCTATTCAGTACAATGCCCCACTGGGAACTCGCTGGGCA
AAGGAAAAGGCCGCCGCTGGGGGCTCAGCAGCCTTCGATCTCCCTTCAGATCCAAAGTCTATCGGTCCCTGGATC
CTGGGCGAATGCATCGGCAAAGGCGCTTCTGGTCGTGTAAAGATTGCCCGCCACCAACGAACCCGCCAGCTTGCA
GCCGTCAAGATCCTCCCCATTGCACCGTTGGTCAACTCCAGAGCCTCTCTCGCCACCCAGCAGGCCAAATCCGAA
AAGCAGCGTCTCGGCATCGACCGCGAAATCACAATGATGAAACTCATGAACCATCCCAACATCATGCGCATCTAC
GACGTCTACGAGGGCGAGAAGGAGCTCTTTCTCGTTCTCGAGTACGTCGAGGGTGGCGAGCTCTTTGACTTTTTG
GTCAACCGCGGTCGTCTTCCACCGAGCGAAGCTCTTCTCTATTTTCGACAGATCATCTATGGTCTCAACTATGCA
CATACCTTTTCCATCATCCACAGAGATCTCAAGCCCGAGAATATCCTCATCGCCTCTCTCGACCCGCCTGTCGTC
AAGATTGCCGACTGGGGCATGGCGGCCTTTGCTCCCCCTATGCTCCAACTCGAAACTAGTTGTGGATCTCCTCAC
TACGCCAGTCCCGAGATCGTCAATGGAGAAAAGTACTTTGGAACGGCAACGGATATCTGGAGCTGTGGTGTCATT
CTCTATGCTCTCTTGACTGGCCGACTTCCCTTTGACGACAAAAACGTTCGCACTCTACTCTCCAAGGTCAAGAGC
GGCAAGTACGACATTCCTTCTTGGATGGATCCCATGGCCAAAGACCTCTTGACCAAAATGCTTGTCGTAGACGTT
CACAAACGCATCACGATTCCAGACATTCTTGTCCACCCATGGTTCGTCAAGGGTCCGACATCCACCTCGCAACAT
ACTATGGACATTACTTTGGCTCAACCTCCACTACCCCCTTCTCCTAGTACTCTGGCGCGCCCCATTGCTTCTCCT
GATCTCATTGACCCTGAACTCTTTGCCTCGTTGCGTATCATCTGGGGACGACACGCCGATCCCGACGGCGCTGCC
ATCCAACAAGACCTTTGTTCCCCCGCAGGTCAAGGGCTACACGCCAAGGCATTCTACTTTCTTTTGGACAGATAC
AGAGAAGAATCACTTCGCAACCGGTCTGATGATGCTGCGGATAGGATACAAACTCCACGTTCTGAAACTGAATGT
CAATCGGACAAACTCTATCTTGGCTGGGACCTCGATCAAACTCGTGCACGCAGGAGCCTCGAGGCTGTCGTGAAC
ACTTCATCTCCGGCGGACAAAGCTGTCTCACCCTACAGATCGACCACGCCCGCGAATGAACCCTTTACTGCGGAT
GATCCACGATCCAATGAATTGGTGCTGCCTACTGCGTCTCGCTCAGCCCATCAGTCCATTCGACATCCGATGGAT
ACGCGAAAGAGGCAAACGACACATTCTTACTCTACGACATCTACGGCAACCTCCGCGACCCGGAGTACAGCTTCT
TCGATAAACACTATCAGCCCTCCTCGGTCTGCCATTCCCAAGCGCGGGTATACGCATTCGATGACCCACGGCCAA
ACACGAAGTTCTCATGAGAAACGACGTGCGACTGACCCGAGTATCCAGTCGATGCCTGGAACGCCTATACCGACC
ACACGACACCCCAACCTCCTCGGAGAAGATCGATCGTTCTTGAAGGAGCTTCAGCGTCGTGCATCAGCTGTACCA
TTCCATGCATCCGTGCACCCAGGTCGGGTCCCGCCGCCGTCTTTGATGGACGTGGACTCTTCTGCGGTCACGTTG
AGACAGTCCATGGTCGAACGTTCCGATCTCCGTGAAAACGTAGATAGACCTGGGGCGGTTAGAACTGACGTTTCA
GTTATTCCATCTGACAGCCATATCCACCACCGGCAATCTACTCGTCGTCGTGCCTCACTAGACGCCGAAAAGGAG
AACGCCATGGCTGTCGATGATGGGTGGACTCACGTCGAAACCGAGTCTGCTAATGCTCATTCTCGACCTAGTCCT
TTCGGCGTAACGACCAATCGGGAGGTTGGACGAGATGTGGTCAACACGCCGGAGACCACCCACTCCATTCCGAGC
GCCAAAACCAAAAAGGAGAAAGAAAGGAAAAGTCGACCGCCGCCGATTGAATTACCGCCCATCCATCAGCGTCGC
ACTTTGGTTGGTTCCTCTTTCCATACGCCTTCTCCGGGCCTCCATGGTGGTACTGGGACTGCCCATACTGGTAGT
ACGAGCAACAGGATTATGGCCTCCCCTGTTGTCGGCGAGTTCAAAGGCTGGTTCTCGAATTTGTTCAACTGGAAG
AGCCACTCTGCTCATCCTCCCGCCTCTGTCTTCTACTCCCCAGAAGACATCCCCAAAACTCGCGAAATGACGCTC
CGGTTCTTCCAAAGTCTCGCTTTTGGCATTTCTCGTGTTATTCTGGATCTTAACGCCGACAGCAGTGAGATTTAT
CATTGTCGATTGGACCAGAGCGTGGTTGATCTTGCTACGAATACGACGCTGAAACCTGTCCGGTTGAGGGTGGAG
TTTAGTCTTGTTGTTCCTGCTAGTCCTGGACCCACTACTGGTGGTGGGACTGGTGCTATGACGAGCTCGGCTGGG
ACTACGCCGACGCCTACGCCGACCACTGCTACCTCGGAATTCTGGACGTTTACTACTGGGCAACTTCAACAACAT
GCGCAACAGCCGTTGGATCCTAGTTCCAACACCTTTTTGAGCGCTGGGACGGCTGGATTTGGAGCGAGAGCGACT
CGGAATAGTCTTGCTGCACTTGGTCGGACGGCTTCGAATGCGATTGGGCATCACCATCAAAGTCACCATCATCAT
CATCATCTTCACCATCATCCTACTGTAAATACGACCTCAGCTACTACCACTACCTCAGGTGGGCAGGGTGCTACG
GTCAACGCCAACGCAACGGCTCTGCTCTCGACACACTGGGAGATGCCTCTCGGCTGTGCGTGTGTGATTGTGATG
ACGTTTGAGAAGGGGTCGGGGTCTGCGTTTAGGGCGGTTAAGCAGCGGTTGCAGGATATGTTTTCGGATTCGCAG
GTGGTTGGGTCGGGTGTAGGCGCGGGTGTGGGTGTGGGTGCAGGTGGGGGTGTTGGGGCGGGAGGAGGCGCTGTT
TCGCCGACGTGTTTTAGTCCTGTTTTGACTGCTGGTGGTGGTGGGGATCGGATGGTGATGTAG
Length 3288

Transcript

Sequence id CopciAB_405337.T0
Sequence >CopciAB_405337.T0
GTCGCATTCAAGACAGCGCAGAGAGGCTGTTCTTTAGAAGAACAGGATACGTTCTGAAGAACTGGTCCAATGTTC
ATTCGAGAGGGTTTCAGCGATGCTGGGTGGGGGATATGTCGCACGTGATGACGCATGGGCCGGGTGATTTTGAAT
CTTGTGGCTGACGGTGATTTCTGAATCCTGGTTTCTCTCTCTCCGCTGGCCGTAGAAGGCGTCTGACATCGTACC
GCCATGCAGAACAGTCAAGACAGCCCGCCTCGCGCACCTCCTATTCAGTACAATGCCCCACTGGGAACTCGCTGG
GCAAAGGAAAAGGCCGCCGCTGGGGGCTCAGCAGCCTTCGATCTCCCTTCAGATCCAAAGTCTATCGGTCCCTGG
ATCCTGGGCGAATGCATCGGCAAAGGCGCTTCTGGTCGTGTAAAGATTGCCCGCCACCAACGAACCCGCCAGCTT
GCAGCCGTCAAGATCCTCCCCATTGCACCGTTGGTCAACTCCAGAGCCTCTCTCGCCACCCAGCAGGCCAAATCC
GAAAAGCAGCGTCTCGGCATCGACCGCGAAATCACAATGATGAAACTCATGAACCATCCCAACATCATGCGCATC
TACGACGTCTACGAGGGCGAGAAGGAGCTCTTTCTCGTTCTCGAGTACGTCGAGGGTGGCGAGCTCTTTGACTTT
TTGGTCAACCGCGGTCGTCTTCCACCGAGCGAAGCTCTTCTCTATTTTCGACAGATCATCTATGGTCTCAACTAT
GCACATACCTTTTCCATCATCCACAGAGATCTCAAGCCCGAGAATATCCTCATCGCCTCTCTCGACCCGCCTGTC
GTCAAGATTGCCGACTGGGGCATGGCGGCCTTTGCTCCCCCTATGCTCCAACTCGAAACTAGTTGTGGATCTCCT
CACTACGCCAGTCCCGAGATCGTCAATGGAGAAAAGTACTTTGGAACGGCAACGGATATCTGGAGCTGTGGTGTC
ATTCTCTATGCTCTCTTGACTGGCCGACTTCCCTTTGACGACAAAAACGTTCGCACTCTACTCTCCAAGGTCAAG
AGCGGCAAGTACGACATTCCTTCTTGGATGGATCCCATGGCCAAAGACCTCTTGACCAAAATGCTTGTCGTAGAC
GTTCACAAACGCATCACGATTCCAGACATTCTTGTCCACCCATGGTTCGTCAAGGGTCCGACATCCACCTCGCAA
CATACTATGGACATTACTTTGGCTCAACCTCCACTACCCCCTTCTCCTAGTACTCTGGCGCGCCCCATTGCTTCT
CCTGATCTCATTGACCCTGAACTCTTTGCCTCGTTGCGTATCATCTGGGGACGACACGCCGATCCCGACGGCGCT
GCCATCCAACAAGACCTTTGTTCCCCCGCAGGTCAAGGGCTACACGCCAAGGCATTCTACTTTCTTTTGGACAGA
TACAGAGAAGAATCACTTCGCAACCGGTCTGATGATGCTGCGGATAGGATACAAACTCCACGTTCTGAAACTGAA
TGTCAATCGGACAAACTCTATCTTGGCTGGGACCTCGATCAAACTCGTGCACGCAGGAGCCTCGAGGCTGTCGTG
AACACTTCATCTCCGGCGGACAAAGCTGTCTCACCCTACAGATCGACCACGCCCGCGAATGAACCCTTTACTGCG
GATGATCCACGATCCAATGAATTGGTGCTGCCTACTGCGTCTCGCTCAGCCCATCAGTCCATTCGACATCCGATG
GATACGCGAAAGAGGCAAACGACACATTCTTACTCTACGACATCTACGGCAACCTCCGCGACCCGGAGTACAGCT
TCTTCGATAAACACTATCAGCCCTCCTCGGTCTGCCATTCCCAAGCGCGGGTATACGCATTCGATGACCCACGGC
CAAACACGAAGTTCTCATGAGAAACGACGTGCGACTGACCCGAGTATCCAGTCGATGCCTGGAACGCCTATACCG
ACCACACGACACCCCAACCTCCTCGGAGAAGATCGATCGTTCTTGAAGGAGCTTCAGCGTCGTGCATCAGCTGTA
CCATTCCATGCATCCGTGCACCCAGGTCGGGTCCCGCCGCCGTCTTTGATGGACGTGGACTCTTCTGCGGTCACG
TTGAGACAGTCCATGGTCGAACGTTCCGATCTCCGTGAAAACGTAGATAGACCTGGGGCGGTTAGAACTGACGTT
TCAGTTATTCCATCTGACAGCCATATCCACCACCGGCAATCTACTCGTCGTCGTGCCTCACTAGACGCCGAAAAG
GAGAACGCCATGGCTGTCGATGATGGGTGGACTCACGTCGAAACCGAGTCTGCTAATGCTCATTCTCGACCTAGT
CCTTTCGGCGTAACGACCAATCGGGAGGTTGGACGAGATGTGGTCAACACGCCGGAGACCACCCACTCCATTCCG
AGCGCCAAAACCAAAAAGGAGAAAGAAAGGAAAAGTCGACCGCCGCCGATTGAATTACCGCCCATCCATCAGCGT
CGCACTTTGGTTGGTTCCTCTTTCCATACGCCTTCTCCGGGCCTCCATGGTGGTACTGGGACTGCCCATACTGGT
AGTACGAGCAACAGGATTATGGCCTCCCCTGTTGTCGGCGAGTTCAAAGGCTGGTTCTCGAATTTGTTCAACTGG
AAGAGCCACTCTGCTCATCCTCCCGCCTCTGTCTTCTACTCCCCAGAAGACATCCCCAAAACTCGCGAAATGACG
CTCCGGTTCTTCCAAAGTCTCGCTTTTGGCATTTCTCGTGTTATTCTGGATCTTAACGCCGACAGCAGTGAGATT
TATCATTGTCGATTGGACCAGAGCGTGGTTGATCTTGCTACGAATACGACGCTGAAACCTGTCCGGTTGAGGGTG
GAGTTTAGTCTTGTTGTTCCTGCTAGTCCTGGACCCACTACTGGTGGTGGGACTGGTGCTATGACGAGCTCGGCT
GGGACTACGCCGACGCCTACGCCGACCACTGCTACCTCGGAATTCTGGACGTTTACTACTGGGCAACTTCAACAA
CATGCGCAACAGCCGTTGGATCCTAGTTCCAACACCTTTTTGAGCGCTGGGACGGCTGGATTTGGAGCGAGAGCG
ACTCGGAATAGTCTTGCTGCACTTGGTCGGACGGCTTCGAATGCGATTGGGCATCACCATCAAAGTCACCATCAT
CATCATCATCTTCACCATCATCCTACTGTAAATACGACCTCAGCTACTACCACTACCTCAGGTGGGCAGGGTGCT
ACGGTCAACGCCAACGCAACGGCTCTGCTCTCGACACACTGGGAGATGCCTCTCGGCTGTGCGTGTGTGATTGTG
ATGACGTTTGAGAAGGGGTCGGGGTCTGCGTTTAGGGCGGTTAAGCAGCGGTTGCAGGATATGTTTTCGGATTCG
CAGGTGGTTGGGTCGGGTGTAGGCGCGGGTGTGGGTGTGGGTGCAGGTGGGGGTGTTGGGGCGGGAGGAGGCGCT
GTTTCGCCGACGTGTTTTAGTCCTGTTTTGACTGCTGGTGGTGGTGGGGATCGGATGGTGATGTAGGATGGATTT
CGATTTGGATGAAACGGGATTTTATTTGGGAATTCGGGAAAACGGAATTGGGTTGGAGTTTGACATAGCCAGGCG
GAGTGGCCGGGATGTGGGACGGTAAGCGGTCTCACTGGGCGAGGTCGCGGATCTTGGGGCGGATGGGGGATGCGG
CTAGGAGGCGCCTAGTTTGGGACGCACGTTTCGGAACTCGACATACAGATGATGGAGATTCCCACAGACTATACG
ACTATACAGCTACGATGGTATTTACAATCTATTTGACACAGTTTTGGTACTATCTTC
Length 3807

Gene

Sequence id CopciAB_405337.T0
Sequence >CopciAB_405337.T0
GTCGCATTCAAGACAGCGCAGAGAGGCTGTTCTTTAGAAGAACAGGATACGTTCTGAAGAACTGGTCCAATGTTC
ATTCGAGAGGGTTTCAGCGATGCTGGGTGGGGGATATGTCGCACGTGATGACGCATGGGCCGGGTGATTTTGAAT
CTTGTGGCTGACGGTGATTTCTGAATCCTGGTTTCTCTCTCTCCGCTGGCCGTAGAAGGCGTCTGACATCGTACC
GCCATGCAGAACAGTCAAGACAGCCCGCCTCGCGCACCTCCTATTCAGTACAATGCCCCACTGGGAACTCGCTGG
GCAAAGGAAAAGGCCGCCGCTGGGGGCTCAGCAGCCTTCGATCTCCCTTCAGATCCAAAGTCTATCGGTCCCTGG
ATCCTGGGCGAATGCATCGGCAAAGGCGCTTCTGGTCGTGTAAAGATTGCCCGCCACCAACGAACCCGCCAGCTT
GCAGCCGTCAAGATCCTCCCCATTGCACCGTTGGTCAACTCCAGAGCCTCTCTCGCCACCCAGCAGGCCAAATCC
GAAAAGCAGCGTCTCGGCATCGACCGCGAAATCACAATGATGAAACTCATGAACCATCCCAACATCATGCGCATC
TACGACGTCTACGAGGGCGAGAAGGAGCTCTTTCTCGTTCTCGAGTACGTCGAGGGTGGCGAGCTCTTTGACTTT
TTGGTCAACCGCGGTCGTCTTCCACCGAGCGAAGCTCTTCTCTATTTTCGACAGATCATCTATGGTCTCAACTAT
GCACATACCTTTTCCATCATCCACAGAGATCTCAAGCCCGAGAATATCCTCATCGCCTCTCTCGACCCGCCTGTC
GTCAAGATTGCCGACTGGGGCATGGCGGCCTTTGCTCCCCCTATGCTCCAACTCGAAACTAGTTGTGGATCTCCT
CACTACGCCAGTCCCGAGATCGTCAATGGAGAAAAGTACTTTGGAACGGCAACGGATATCTGGAGCTGTGGTGTC
ATTCTCTATGCTCTCTTGACTGGCCGACTTCCCTTTGACGACAAAAACGTTCGCACTCTACTCTCCAAGGTCAAG
AGCGGCAAGTACGACATTCCTTCTTGGATGGATCCCATGGCCAAAGACCTCTTGACCAAAATGCTTGTCGTAGAC
GTTCACAAACGCATCACGGTATGGATTACCGTCCTTGAGTAGTTCTTTGCTGACCGCTTTCCAGATTCCAGACAT
TCTTGTCCACCCATGGTTCGTCAAGGGTCCGACATCCACCTCGCAACATACTATGGACATTACTTTGGCTCAACC
TCCACTACCCCCTTCTCCTAGTACTCTGGCGCGCCCCATTGCTTCTCCTGATCTCATTGACCCTGAACTCTTTGC
CTCGTTGCGTATCATCTGGGGACGACACGCCGATCCCGACGGCGCTGCCATCCAACAAGACCTTTGTTCCCCCGC
AGGTCAAGGGCTACACGCCAAGGCATTCTACTTTCTTTTGGACAGATACAGAGAAGAATCACTTCGCAACCGGTC
TGATGATGCTGCGGATAGGATACAAACTCCACGTTCTGAAACTGAATGTCAATCGGACAAACTCTATCTTGGCTG
GGACCTCGATCAAACTCGTGCACGCAGGAGCCTCGAGGCTGTCGTGAACACTTCATCTCCGGCGGACAAAGCTGT
CTCACCCTACAGATCGACCACGCCCGCGAATGAACCCTTTACTGCGGATGATCCACGATCCAATGAATTGGTGCT
GCCTACTGCGTCTCGCTCAGCCCATCAGTCCATTCGACATCCGATGGATACGCGAAAGAGGCAAACGACACATTC
TTACTCTACGACATCTACGGCAACCTCCGCGACCCGGAGTACAGCTTCTTCGATAAACACTATCAGCCCTCCTCG
GTCTGCCATTCCCAAGCGCGGGTATACGCATTCGATGACCCACGGCCAAACACGAAGTTCTCATGAGAAACGACG
TGCGACTGACCCGAGTATCCAGTCGATGCCTGGAACGCCTATACCGACCACACGACACCCCAACCTCCTCGGAGA
AGATCGATCGTTCTTGAAGGAGCTTCAGCGTCGTGCATCAGCTGTACCATTCCATGCATCCGTGCACCCAGGTCG
GGTCCCGCCGCCGTCTTTGATGGACGTGGACTCTTCTGCGGTCACGTTGAGACAGTCCATGGTCGAACGTTCCGA
TCTCCGTGAAAACGTAGATAGACCTGGGGCGGTTAGAACTGACGTTTCAGTTATTCCATCTGACAGCCATATCCA
CCACCGGCAATCTACTCGTCGTCGTGCCTCACTAGACGCCGAAAAGGAGAACGCCATGGCTGTCGATGATGGGTG
GACTCACGTCGAAACCGAGTCTGCTAATGCTCATTCTCGACCTAGTCCTTTCGGCGTAACGACCAATCGGGAGGT
TGGACGAGATGTGGTCAACACGCCGGAGACCACCCACTCCATTCCGAGCGCCAAAACCAAAAAGGAGAAAGAAAG
GAAAAGTCGACGTAAGTACCCGCTCCTGTCGGTTCCCCGAGTTATTGGCCCCTGGATAGATATCACCGGCATTTG
GAAATACCTTTACTCATGAATGCCGAATTTGTCATTTTACAGCGCCGCCGATTGAATTACCGCCCATCCATCAGC
GTCGCACTTTGGTTGGTTCCTCTTTCCATACGCCTTCTCCGGGCCTCCATGGTGGTACTGGGACTGCCCATACTG
GTAGTACGAGCAACAGGATTATGGCCTCCCCTGTTGTCGGCGAGTTCAAAGGCTGGTTCTCGAATTTGTTCAACT
GGAAGAGCCACTCTGCTCATCCTCCCGCCTCTGTCTTCTACTCCCCAGAAGACATCCCCAAAACTCGCGAAATGA
CGCTCCGGTTCTTCCAAAGTCTCGCTTTTGGCATTTCTCGTGTTATTCTGGATCTTAACGCCGACAGCAGTGAGA
TTTATCATTGTCGATTGGACCAGAGCGTGGTTGATCTTGCTACGAATACGACGCTGAAACCTGTCCGGTTGAGGG
TGGAGTTTAGTCTTGTTGTTCCTGCTAGTCCTGGACCCACTACTGGTGGTGGGACTGGTGCTATGACGAGCTCGG
CTGGGACTACGCCGACGCCTACGCCGACCACTGCTACCTCGGAATTCTGGACGTTTACTACTGGGCAACTTCAAC
AACATGCGCAACAGCCGTTGGATCCTAGTTCCAACACCTTTTTGAGCGCTGGGACGGCTGGATTTGGAGCGAGAG
CGACTCGGAATAGTCTTGCTGCACTTGGTCGGACGGCTTCGAATGCGATTGGGCATCACCATCAAAGTCACCATC
ATCATCATCATCTTCACCATCATCCTACTGTAAATACGACCTCAGCTACTACCACTACCTCAGGTGGGCAGGGTG
CTACGGTCAACGCCAACGCAACGGCTCTGCTCTCGACACACTGGGAGATGCCTCTCGGCTGTGCGTGTGTGATTG
TGATGACGTTTGAGAAGGGGTCGGGGTCTGCGTTTAGGGCGGTTAAGCAGCGGTTGCAGGATATGTTTTCGGATT
CGCAGGTGGTTGGGTCGGGTGTAGGCGCGGGTGTGGGTGTGGGTGCAGGTGGGGGTGTTGGGGCGGGAGGAGGCG
CTGTTTCGCCGACGTGTTTTAGTCCTGTTTTGACTGCTGGTGGTGGTGGGGATCGGATGGTGATGTAGGATGGAT
TTCGATTTGGATGAAACGGGATTTTATTTGGGAATTCGGGAAAACGGAATTGGGTTGGAGTTTGACATAGCCAGG
CGGAGTGGCCGGGATGTGGGACGGTAAGCGGTCTCACTGGGCGAGGTCGCGGATCTTGGGGCGGATGGGGGATGC
GGCTAGGAGGCGCCTAGTTTGGGACGCACGTTTCGGAACTCGACATACAGATGATGGAGATTCCCACAGACTATA
CGACTATACAGCTACGATGGTATTTACAATCTATTTGACACAGTTTTGGTACTATCTTC
Length 3959