CopciAB_419097
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_419097 Strain Coprinopsis cinerea Okayama 7
Standard name PKC1 Synonyms 419097
Uniprot id Functional description Protein kinase c
Location scaffold_7:1172126..1176366 Strand +
Gene length (nt) 4241 Transcript length (nt) 3580
CDS length (nt) 3357 Protein length (aa) 1118

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Aspergillus nidulans AN0106_pkcA
Aspergillus niger pkcA
Schizosaccharomyces pombe pck2

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7261465 74.1 0 1672
Hypsizygus marmoreus strain 51987-8 Hypma_RDB17927 71.3 0 1613
Lentinula edodes NBRC 111202 Lenedo1_1126815 71 0 1602
Lentinula edodes W1-26 v1.0 Lentinedodes1_14587 71 0 1602
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_152055 68.6 0 1565
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_100325 69.2 0 1565
Pleurotus eryngii ATCC 90797 Pleery1_1423704 69.2 0 1559
Pleurotus ostreatus PC15 PleosPC15_2_1106275 68.2 0 1554
Flammulina velutipes Flave_chr05AA00510 69 0 1553
Pleurotus ostreatus PC9 PleosPC9_1_63445 68.5 0 1547
Schizophyllum commune H4-8 Schco3_2614950 69 0 1530
Ganoderma sp. 10597 SS1 v1.0 Gansp1_107336 65.6 0 1512
Auricularia subglabra Aurde3_1_1323188 62.6 0 1412
Lentinula edodes B17 Lened_B_1_1_17104 88.8 2.434E-217 704
Grifola frondosa Grifr_OBZ69016 45.5 5.193E-160 535

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 231.5096 10.8418 6.2595
oidia 228.6577 13.8546 7.999
vegetative_mycelium 237.0949 19.0624 11.0057
primordia 139.5884 3.4714 2.0042
hyphal_knot 260.456 4.3505 2.5118
young_fruiting_body 460.0317 72.9907 42.1412
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 218.2796 47.6888 27.5332
Wheat bran 191.93 39.0983 22.5734
Horse manure 249.741 21.4801 12.4016
Oak leaves 332.9626 46.4451 26.8151
Hay 247.2297 33.338 19.2477
Corn stalk 284.3316 36.279 20.9457
Pectine 244.3091 6.9226 3.9968
Microcrystalline cellulose 207.3958 25.6114 14.7868
Xylose 237.1276 39.7099 22.9265
Cellobiose 229.3825 23.9405 13.822
Lignin 206.266 30.4328 17.5704
Apple peels 283.5472 14.905 8.6054
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 225.6073 4.8022 2.7726
Bsubtilis 195.9798 11.5131 6.6471
Ecoli 180.56 6.3054 3.6404
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 16.5987 2.1056 1.2157
BS 4h 27.0042 2.7116 1.5656
BS 8h 26.6507 8.9481 5.1662
BS 12h 30.0547 1.8479 1.0669
Oidia 0 h 25.7176 9.6162 5.5519
Oidia 18 h 43.7952 7.125 4.1136
Sclerotia 23.7506 10.8743 6.2783
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 15.225 2.9114 1.6809
DM 36h 17.2975 0.7378 0.426
DM 60h 26.4795 2.254 1.3013
DM 84h 31.3933 3.2489 1.8757
DM 108h 28.4383 1.0053 0.5804
DM 132h 29.8512 7.5143 4.3384
DM 156hAE 56.2525 1.4495 0.8369
ELI1hAE 30.1849 2.6875 1.5516
ELI2hAE 31.306 4.9205 2.8408
LI2hAE 27.3695 1.784 1.03
LI6hAE 29.7343 3.7746 2.1793
LI12hAE 24.0878 1.2081 0.6975
LI18hAE 34.5265 7.4166 4.282
LI 24hAE 42.169 4.0274 2.3252
DM 156hAM 30.9107 6.0507 3.4934
ELI1hAM 15.8566 2.5868 1.4935
ELI2hAM 17.3019 4.7916 2.7664
LI2hAM 16.8463 2.6097 1.5067
LI6hAM 30.7472 4.1905 2.4194
LI12hAM 23.4995 3.6338 2.098
LI18hAM 29.3824 4.4934 2.5942
LI 24hAM 41.5048 13.3496 7.7074
LI 24hHK 32.7188 4.0149 2.318
L/D 6h 51.0662 12.389 7.1528
L/D 12h 47.4167 5.6329 3.2522
L/D 18h 38.5495 4.5428 2.6228
L/D 24h 35.8165 2.1331 1.2315
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 151.3459 7.8347 4.5234
Hyphal knots 191.2514 26.4921 15.2952
Primordium 1 207.7348 35.7192 20.6225
Primordium 2 205.3429 17.0653 9.8527
Young Fruiting body cap 100.0628 28.367 16.3777
Younf fruiting body gill 135.8431 56.2891 32.4985
Young fruiting body stipe 166.2841 31.558 18.22
Mature fruiting body cap_gill 245.7953 24.9183 14.3866
Mature fruiting body stipe 293.9886 46.81 27.0258
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 332.1207 29.8391 17.2276
NH4NO3 282.9078 8.0669 4.6575
Proline 258.2759 47.7432 27.5645
Tryptophan 282.3924 34.2342 19.7651
Isoleucin 267.9211 13.6367 7.8731
Arginine 236.5519 15.6573 9.0398
Metionine 232.5724 30.2027 17.4375
NaNO3 257.1695 7.4961 4.3279
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 332.1207 29.8391 17.2276
Citrus peel 154.7674 26.9864 15.5806
Poplar leaves 221.8312 17.103 9.8744
Typha leaves 202.3309 49.6313 28.6546
Overwintered Salix leaves 211.3196 32.9637 19.0316
Reed flowering 238.8535 23.0581 13.3126
Tigernut 197.5559 20.6085 11.8983
Energy cane 237.0623 32.8891 18.9885
Guar gum 235.7213 36.4332 21.0347
Apple peels 183.2835 19.0708 11.0105
Cellobiose 222.8581 7.1885 4.1503
Corn stalk 229.9528 27.8214 16.0627
Horse manure 257.1169 75.8307 43.7809
Lignin 174.8048 86.2106 49.7737
Microcrystalline cellulose 186.0947 38.6563 22.3182
Oak leaves 233.9348 41.605 24.0207
Pectin esterified 140.7978 20.9875 12.1171
Poplar sawdust 222.0214 13.9341 8.0448
Wheat bran 166.667 28.4931 16.4505
Chlamydomonas reinhardtii 216.8795 8.4375 4.8714
Vertatryl alcohol 143.9207 21.8281 12.6025
Furfural 187.7115 24.8657 14.3562
Autoclaved mycelium 240.4939 18.3996 10.623
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 248.6067 15.5519 8.9789
Ribose 263.9315 8.0516 4.6486
Mannose 261.8583 10.5894 7.4879
Fructose 271.0951 10.68 6.1661
Arabinose 275.0134 17.6368 10.1826
Xylose 273.5888 10.886 6.2851
Galacturonic acid 261.9538 19.3441 11.1683
Rhamnogalacturonan 250.9459 4.1417 2.3912
Pectin esterified 253.8331 8.7623 5.0589
Polygalacturonic acid 251.3102 7.373 4.2568
Sodium acetate 254.1023 3.3891 1.9567
No nitrogen 258.922 6.8156 3.935
BSA 263.4532 5.2625 3.0383
Glutamine 262.3315 16.4575 9.5017
No phosphate 224.9099 14.342 8.2804
No carbon 252.437 9.6066 6.7929
No sulphur 261.614 13.61 7.8577
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 332.1207 29.8391 17.2276
Amylose 206.4978 17.9255 10.3493
Fucose 218.2855 15.6538 9.0377
Galactose 229.9712 12.0298 6.9454
Lactose 235.7583 14.3729 8.2982
Maltose 241.2141 21.1088 12.1872
Mannitol 249.198 11.9278 6.8865
Rhamnose 241.5325 35.501 20.4965
Sorbitol 216.6744 13.33 7.6961
Trehalose 242.8886 7.8375 4.525
Glycerol 229.9899 25.43 14.682
Glucuronic acid 262.6461 16.8876 9.75
Arabinan 203.9204 35.1726 20.3069
Galactan 206.8916 19.0179 10.98
Galactomannan 256.2833 25.1265 14.5068
Glucan 252.4336 26.5605 15.3347
Xylan 211.8459 48.7694 28.157
Xyloglucan 255.667 8.2295 4.7513
Arabinogalactan 246.7489 11.605 6.7002
Pectin 246.8798 112.8444 65.1507
Rhamnogalacturonan 310.4856 52.012 30.0291
Polygalacturonic acid 252.1755 10.1519 5.8612
Mannan 255.2322 17.6916 10.2143
Amylopectin 185.0593 32.9344 19.0147
Inulin 170.1355 21.1214 12.1944
BSA 276.4969 18.89 10.9061
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 26.4795 2.254 1.3013
2h WAT 19.3101 4.0776 2.3542
4h WAT 18.9805 6.7829 3.9161
8h WAT 16.5228 1.5166 0.8756
16h WAT 26.6902 10.3129 5.9542
24h WAT 26.2109 8.581 4.9542
WAT hyphal knot -30h 12.3556 4.9542 2.8603
WAT hyphal knot -22h 14.1763 3.0541 1.7633
WAT hyphal knot -15h 18.3045 3.3195 1.9165
WAT hyphal knot -7.5h 22.6606 7.8956 4.5585
WAT hyphal knot 20.6247 4.6405 2.6792
WAT hyphal knot +7.5h 33.329 5.8063 3.3523
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 152.8163 48.2922 27.8815
Straw 3h 132.7596 41.9316 24.2092
Straw 6h 122.3123 19.8765 11.4757
Straw 12h 194.4887 6.3411 3.661
Straw 24h 172.7871 35.0357 20.2278
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 14.9974 2.0026 1.1562
Frost (-20C, 30min) 15.0506 0.3286 0.1897
Heat shock (47C, 2h) 10.0354 1.6913 0.9765
High CO2 22.7838 2.1454 1.2387
Drought (4% agar, 12h) 24.2005 1.9246 1.1111
Oxidative (1mM H2O2, 3h) 13.4963 1.0016 0.5783
Acidic (pH4, 3h) 15.19 2.7189 1.5698
Alkaline (pH9, 3h) 16.3022 1.9866 1.147
Osmotic (sorbitol 2h) 12.7917 1.6669 0.9624
CongoRed (3h) 15.8009 5.2963 3.0578
Cobalt chloride control 19.4888 3.2836 1.8958
Cobalt chloride 2mM 22.0758 4.3196 2.4939
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 36.7601 4.4571 2.5733
Cold stimulation 22.0647 9.4356 5.4477
Scratched surface 10.833 1.5593 0.9003
Ca2+, 200mM, 24h 12.7428 2.1155 1.2214
Cu2+, 2mM, 6h 16.4679 5.8112 3.3551
Voriconazole 18.7769 4.5066 2.6019
Trichoderma interaction, early 15.2703 2.2945 1.3247
Trichoderma interaction 60h 8.875 8.8086 5.0857
Cobalt chloride 2mM repeat 21.1929 7.95 4.59
Hypoxia 27.8764 5.6945 3.2877
Hypoxia control 23.8045 3.0812 1.779
Protoplastation control 16.3522 3.2899 2.3263
Protoplastation 3.5h 37.1963 12.6446 8.9411
Protoplastation 1.5h 38 8.4025 5.9415

General data

Systematic name PKC1
Protein id CopciAB_419097.T0
Description Protein kinase c

Annotation summary

0 300 600 900 1118

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd11620 HR1_PKC-like_2_fungi IPR037312 121 192
CDD cd20822 C1_ScPKC1-like_rpt1 - 437 489
CDD cd20823 C1_ScPKC1-like_rpt2 - 501 559
CDD cd05570 STKc_PKC - 795 1112
Pfam PF02185 Hr1 repeat IPR011072 131 192
Pfam PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) IPR002219 439 488
Pfam PF00130 Phorbol esters/diacylglycerol binding domain (C1 domain) IPR002219 505 556
Pfam PF00069 Protein kinase domain IPR000719 793 1050
Pfam PF00433 Protein kinase C terminal domain IPR017892 1073 1110

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR002219 Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR000961 AGC-kinase, C-terminal
IPR017892 Protein kinase, C-terminal
IPR036274 HR1 repeat superfamily
IPR046349 C1-like domain superfamily
IPR000719 Protein kinase domain
IPR000008 C2 domain
IPR011009 Protein kinase-like domain superfamily
IPR035892 C2 domain superfamily
IPR011072 HR1 rho-binding domain
IPR037312 Protein kinase C-like, HR1 domain
IPR008271 Serine/threonine-protein kinase, active site
IPR017441 Protein kinase, ATP binding site

GO

Go id Term Ontology
GO:0004674 protein serine/threonine kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0004672 protein kinase activity MF
GO:0007165 signal transduction BP
GO:0004697 protein kinase C activity MF
GO:0009272 fungal-type cell wall biogenesis BP

KEGG

KEGG Orthology
K02677
K18050

EggNOG

COG category Description
T Protein kinase c

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_419097 across fungi.

Arrow shows the origin of gene family containing CopciAB_419097.

Protein

Sequence id CopciAB_419097.T0
Sequence >CopciAB_419097.T0
MDELDQKIGDTWRRIQTERKILEATQHLRLATTNQDVLKRNDAKVRETERSLAYLEGVLRELQTRKAQQMQQGDP
SRFPSGPTPQVPPKDFDGRGFSPDGTVARPQRKQYTNLDLIKADTPFTPRKISRTLHQLEFKLQVEKQYKLGIDK
MAKLYQADGDKKSKADAEAKRIESDKKIQLLETALKRYRNLHVLDDVAEDDEQDTGTEGDRREKLRAKPLSGTLY
VTVKGARELDHAPVVTRFRSSAKQVTETHVSIKAEGNQLARSHPSRTDRWNEDFEIAVEKANEIEIVLYDKQVSE
PHAVPIGLLWIKITDLVDALRRQKIGQESQGGWVTANAMHGDGPMGPGGIHHHPSQPITGDINAPIAFQDNLSAS
GHGASHTEGIEAWFSVEPAGAIALQLNFVKENVRKRPFDAPLGGLGRQGAVRKRKGDVHEMNGHKFIQRQFYQLM
KCAFCGDFLLNAAGYQCEDCRYTCHQKCYEKVVTKCISKSSTGEDEDKINHRIPHRFESITNIGANWCCHCGYML
PFGRKNARRCTECDITCHANCAHLVPDFCGMRMEVANELLRSMQDIKRRREDREQRRPPTHQPEQLHTSTPSLDA
RLGQMTLGGPPQHEPGPPAQLPSSDPFGRQMPMPAPQTYGPPPDRSYYSQSPPPPAQSPPYGSPPTQQMPPRPPG
ARVPVPYQQEHQAPPRPPPGAYDPSASGYGSPYTSPRSQPQGLPEKPSLPSVPQQQQYQQQRPPVGLPPHVQPQR
IPPPQAAPQQGMVPPQHQQQMIQAQPQRQPSKKRKVGLDDFNFLAVLGKGNFGKVMLAEEKKTNGLYAIKVLKKE
FIIDNDEVESTRSEKRVFLTAAKERHPFLLGLHSCFQTETRIYFVMEYVSGGDLMLHIQRKQFSLRQAKFYASEV
LLALEYFHQNGIIYRDLKLDNILLTLDGHVKVADYGLCKEQMWYGQTTSTFCGTPEFMAPEILLEQRYGRAVDWW
AFGVLTYEMLLGQSPFRGDDEDEIFDAILEDEPLYPITMPRDAVSILQKLLTRDPARRLGSGKEDAEEIKRQPFF
KDVNWDDVFHKRIPPPYFPTISGSADTSNFDEEFTREQPTLTPVHGQLSSRDQAEFNGFSWVASWADI
Length 1118

Coding

Sequence id CopciAB_419097.T0
Sequence >CopciAB_419097.T0
ATGGATGAACTCGACCAGAAGATTGGGGACACTTGGCGGCGCATCCAGACAGAGCGCAAGATTCTTGAGGCGACC
CAGCATCTGCGGCTGGCGACGACGAACCAAGATGTCCTCAAGCGCAACGATGCAAAGGTCAGAGAGACAGAGCGC
AGTCTCGCCTATCTAGAGGGCGTCCTTCGCGAGCTGCAGACCCGGAAAGCACAGCAAATGCAACAAGGTGATCCT
TCACGATTTCCCTCTGGGCCTACGCCTCAAGTACCACCAAAGGATTTCGATGGGCGCGGCTTTTCCCCCGACGGC
ACCGTCGCTCGACCCCAGAGGAAGCAATATACCAACCTCGATCTCATCAAGGCTGATACCCCGTTCACACCCAGG
AAAATCTCGCGTACTCTCCACCAGTTAGAATTCAAGCTCCAGGTCGAAAAACAATACAAACTCGGCATAGATAAG
ATGGCAAAATTGTACCAAGCTGACGGCGACAAGAAATCGAAAGCGGACGCAGAGGCCAAGCGGATCGAGAGCGAC
AAGAAGATTCAGCTCCTCGAAACCGCATTGAAGCGTTATCGAAACCTTCATGTACTCGACGATGTAGCCGAAGAC
GATGAGCAAGACACTGGGACCGAAGGCGACCGTCGAGAGAAATTGCGCGCGAAACCTCTCTCTGGTACCCTCTAT
GTCACCGTCAAGGGAGCTCGCGAGCTCGACCATGCCCCGGTTGTCACGCGCTTCCGTTCATCAGCGAAGCAGGTC
ACCGAAACACATGTCTCTATCAAGGCCGAAGGCAATCAATTGGCTCGATCGCATCCCTCGCGGACGGACCGCTGG
AATGAAGATTTCGAGATCGCCGTCGAAAAAGCCAACGAAATCGAAATCGTCCTTTACGACAAGCAAGTCAGCGAG
CCACATGCAGTCCCCATTGGCCTGCTATGGATCAAGATCACTGACCTTGTTGACGCCCTTCGTCGGCAGAAGATT
GGTCAGGAAAGTCAAGGAGGATGGGTGACAGCTAATGCGATGCACGGGGATGGTCCAATGGGACCCGGCGGGATC
CACCACCACCCAAGCCAGCCCATTACTGGCGACATTAACGCACCTATCGCATTCCAAGACAACCTTTCTGCTTCC
GGTCATGGGGCTAGTCATACCGAAGGAATCGAGGCATGGTTTTCGGTCGAGCCAGCTGGTGCAATTGCCCTTCAA
CTCAACTTCGTTAAGGAAAATGTCCGCAAGCGTCCTTTCGATGCGCCGCTTGGTGGCCTTGGGCGCCAAGGCGCC
GTCCGCAAGCGCAAGGGCGATGTACACGAAATGAATGGCCACAAGTTCATCCAACGCCAATTCTACCAGCTGATG
AAATGCGCATTCTGCGGCGACTTCCTTCTCAATGCCGCCGGTTACCAATGCGAGGATTGTCGGTACACTTGTCAC
CAAAAATGCTATGAGAAAGTGGTCACCAAATGTATATCCAAGTCAAGCACAGGGGAGGACGAGGATAAGATCAAT
CATCGTATTCCTCACCGATTCGAATCAATCACCAATATCGGTGCCAACTGGTGTTGCCATTGTGGCTACATGCTT
CCCTTTGGCCGCAAGAATGCCCGCCGTTGCACAGAATGCGACATCACTTGCCACGCCAATTGCGCACATTTGGTT
CCCGATTTCTGCGGTATGAGGATGGAGGTTGCGAACGAACTCCTCCGAAGTATGCAGGATATCAAGCGAAGACGC
GAAGATCGCGAGCAACGACGCCCTCCCACTCACCAGCCCGAGCAGCTCCATACTTCGACGCCTTCCCTCGATGCC
AGGTTGGGCCAGATGACTCTAGGAGGGCCACCCCAGCACGAACCGGGTCCCCCGGCACAGTTGCCTTCCAGTGAT
CCATTTGGACGACAAATGCCAATGCCCGCTCCTCAGACCTACGGGCCACCTCCGGATAGATCTTACTATTCCCAA
TCGCCACCTCCGCCTGCTCAATCTCCCCCTTATGGATCACCTCCTACCCAACAGATGCCGCCTCGCCCTCCAGGG
GCCCGAGTACCAGTCCCTTATCAGCAGGAGCATCAAGCACCACCTCGACCTCCGCCTGGAGCGTACGACCCAAGT
GCCTCTGGATATGGCTCTCCCTATACGAGCCCTCGATCTCAGCCACAAGGGCTCCCCGAGAAACCTTCATTACCT
TCCGTTCCTCAGCAGCAACAGTACCAGCAACAGCGACCCCCCGTTGGACTGCCTCCTCATGTCCAGCCTCAACGC
ATCCCTCCGCCTCAAGCTGCCCCCCAGCAAGGCATGGTCCCGCCCCAACACCAACAACAGATGATACAGGCTCAG
CCGCAGCGTCAACCCTCGAAGAAGCGGAAGGTCGGATTGGACGATTTCAACTTCCTTGCAGTCCTTGGAAAGGGT
AATTTCGGAAAGGTCATGTTGGCGGAGGAAAAAAAGACGAATGGACTATATGCGATCAAGGTTTTGAAGAAGGAG
TTTATCATCGACAACGATGAAGTTGAGAGCACGCGTTCCGAAAAGCGCGTTTTCTTGACCGCTGCAAAGGAGCGC
CATCCCTTCCTTTTGGGTCTTCACTCGTGCTTCCAGACTGAAACTCGGATATACTTTGTGATGGAATATGTCAGT
GGTGGTGACTTGATGCTGCACATTCAGCGGAAGCAGTTCTCGCTGCGTCAGGCCAAGTTCTACGCATCGGAGGTC
CTGTTGGCTTTGGAGTACTTCCACCAAAACGGCATCATCTATCGTGATCTCAAGCTCGACAATATCCTGCTTACT
CTCGACGGACATGTCAAGGTTGCCGATTACGGTCTCTGCAAGGAACAGATGTGGTATGGTCAGACGACGAGCACT
TTCTGTGGCACTCCAGAGTTCATGGCGCCCGAAATTTTGCTTGAGCAACGATACGGTCGAGCTGTCGACTGGTGG
GCGTTTGGTGTATTGACCTATGAAATGTTGTTGGGTCAATCACCCTTCCGAGGAGACGACGAAGATGAAATCTTC
GACGCAATCCTGGAAGACGAGCCATTGTATCCCATTACCATGCCTCGTGACGCTGTGTCGATATTGCAAAAGCTG
TTGACGAGGGACCCTGCTCGTCGTCTCGGATCAGGAAAGGAGGACGCCGAAGAAATCAAAAGACAGCCTTTCTTC
AAGGATGTCAACTGGGATGATGTGTTCCACAAGCGTATTCCTCCACCCTACTTCCCGACAATCAGCGGAAGCGCC
GATACCAGCAACTTCGACGAAGAGTTCACACGCGAACAGCCAACATTAACCCCAGTGCACGGTCAACTCTCTTCG
CGAGACCAAGCCGAATTCAACGGTTTCTCTTGGGTTGCGAGTTGGGCGGATATCTAA
Length 3357

Transcript

Sequence id CopciAB_419097.T0
Sequence >CopciAB_419097.T0
ATCTTTCTTCCTCCTCGTCGCTGCCTCCAGCGGCGACTGCTCAGTAACATCTACCACAATGGATGAACTCGACCA
GAAGATTGGGGACACTTGGCGGCGCATCCAGACAGAGCGCAAGATTCTTGAGGCGACCCAGCATCTGCGGCTGGC
GACGACGAACCAAGATGTCCTCAAGCGCAACGATGCAAAGGTCAGAGAGACAGAGCGCAGTCTCGCCTATCTAGA
GGGCGTCCTTCGCGAGCTGCAGACCCGGAAAGCACAGCAAATGCAACAAGGTGATCCTTCACGATTTCCCTCTGG
GCCTACGCCTCAAGTACCACCAAAGGATTTCGATGGGCGCGGCTTTTCCCCCGACGGCACCGTCGCTCGACCCCA
GAGGAAGCAATATACCAACCTCGATCTCATCAAGGCTGATACCCCGTTCACACCCAGGAAAATCTCGCGTACTCT
CCACCAGTTAGAATTCAAGCTCCAGGTCGAAAAACAATACAAACTCGGCATAGATAAGATGGCAAAATTGTACCA
AGCTGACGGCGACAAGAAATCGAAAGCGGACGCAGAGGCCAAGCGGATCGAGAGCGACAAGAAGATTCAGCTCCT
CGAAACCGCATTGAAGCGTTATCGAAACCTTCATGTACTCGACGATGTAGCCGAAGACGATGAGCAAGACACTGG
GACCGAAGGCGACCGTCGAGAGAAATTGCGCGCGAAACCTCTCTCTGGTACCCTCTATGTCACCGTCAAGGGAGC
TCGCGAGCTCGACCATGCCCCGGTTGTCACGCGCTTCCGTTCATCAGCGAAGCAGGTCACCGAAACACATGTCTC
TATCAAGGCCGAAGGCAATCAATTGGCTCGATCGCATCCCTCGCGGACGGACCGCTGGAATGAAGATTTCGAGAT
CGCCGTCGAAAAAGCCAACGAAATCGAAATCGTCCTTTACGACAAGCAAGTCAGCGAGCCACATGCAGTCCCCAT
TGGCCTGCTATGGATCAAGATCACTGACCTTGTTGACGCCCTTCGTCGGCAGAAGATTGGTCAGGAAAGTCAAGG
AGGATGGGTGACAGCTAATGCGATGCACGGGGATGGTCCAATGGGACCCGGCGGGATCCACCACCACCCAAGCCA
GCCCATTACTGGCGACATTAACGCACCTATCGCATTCCAAGACAACCTTTCTGCTTCCGGTCATGGGGCTAGTCA
TACCGAAGGAATCGAGGCATGGTTTTCGGTCGAGCCAGCTGGTGCAATTGCCCTTCAACTCAACTTCGTTAAGGA
AAATGTCCGCAAGCGTCCTTTCGATGCGCCGCTTGGTGGCCTTGGGCGCCAAGGCGCCGTCCGCAAGCGCAAGGG
CGATGTACACGAAATGAATGGCCACAAGTTCATCCAACGCCAATTCTACCAGCTGATGAAATGCGCATTCTGCGG
CGACTTCCTTCTCAATGCCGCCGGTTACCAATGCGAGGATTGTCGGTACACTTGTCACCAAAAATGCTATGAGAA
AGTGGTCACCAAATGTATATCCAAGTCAAGCACAGGGGAGGACGAGGATAAGATCAATCATCGTATTCCTCACCG
ATTCGAATCAATCACCAATATCGGTGCCAACTGGTGTTGCCATTGTGGCTACATGCTTCCCTTTGGCCGCAAGAA
TGCCCGCCGTTGCACAGAATGCGACATCACTTGCCACGCCAATTGCGCACATTTGGTTCCCGATTTCTGCGGTAT
GAGGATGGAGGTTGCGAACGAACTCCTCCGAAGTATGCAGGATATCAAGCGAAGACGCGAAGATCGCGAGCAACG
ACGCCCTCCCACTCACCAGCCCGAGCAGCTCCATACTTCGACGCCTTCCCTCGATGCCAGGTTGGGCCAGATGAC
TCTAGGAGGGCCACCCCAGCACGAACCGGGTCCCCCGGCACAGTTGCCTTCCAGTGATCCATTTGGACGACAAAT
GCCAATGCCCGCTCCTCAGACCTACGGGCCACCTCCGGATAGATCTTACTATTCCCAATCGCCACCTCCGCCTGC
TCAATCTCCCCCTTATGGATCACCTCCTACCCAACAGATGCCGCCTCGCCCTCCAGGGGCCCGAGTACCAGTCCC
TTATCAGCAGGAGCATCAAGCACCACCTCGACCTCCGCCTGGAGCGTACGACCCAAGTGCCTCTGGATATGGCTC
TCCCTATACGAGCCCTCGATCTCAGCCACAAGGGCTCCCCGAGAAACCTTCATTACCTTCCGTTCCTCAGCAGCA
ACAGTACCAGCAACAGCGACCCCCCGTTGGACTGCCTCCTCATGTCCAGCCTCAACGCATCCCTCCGCCTCAAGC
TGCCCCCCAGCAAGGCATGGTCCCGCCCCAACACCAACAACAGATGATACAGGCTCAGCCGCAGCGTCAACCCTC
GAAGAAGCGGAAGGTCGGATTGGACGATTTCAACTTCCTTGCAGTCCTTGGAAAGGGTAATTTCGGAAAGGTCAT
GTTGGCGGAGGAAAAAAAGACGAATGGACTATATGCGATCAAGGTTTTGAAGAAGGAGTTTATCATCGACAACGA
TGAAGTTGAGAGCACGCGTTCCGAAAAGCGCGTTTTCTTGACCGCTGCAAAGGAGCGCCATCCCTTCCTTTTGGG
TCTTCACTCGTGCTTCCAGACTGAAACTCGGATATACTTTGTGATGGAATATGTCAGTGGTGGTGACTTGATGCT
GCACATTCAGCGGAAGCAGTTCTCGCTGCGTCAGGCCAAGTTCTACGCATCGGAGGTCCTGTTGGCTTTGGAGTA
CTTCCACCAAAACGGCATCATCTATCGTGATCTCAAGCTCGACAATATCCTGCTTACTCTCGACGGACATGTCAA
GGTTGCCGATTACGGTCTCTGCAAGGAACAGATGTGGTATGGTCAGACGACGAGCACTTTCTGTGGCACTCCAGA
GTTCATGGCGCCCGAAATTTTGCTTGAGCAACGATACGGTCGAGCTGTCGACTGGTGGGCGTTTGGTGTATTGAC
CTATGAAATGTTGTTGGGTCAATCACCCTTCCGAGGAGACGACGAAGATGAAATCTTCGACGCAATCCTGGAAGA
CGAGCCATTGTATCCCATTACCATGCCTCGTGACGCTGTGTCGATATTGCAAAAGCTGTTGACGAGGGACCCTGC
TCGTCGTCTCGGATCAGGAAAGGAGGACGCCGAAGAAATCAAAAGACAGCCTTTCTTCAAGGATGTCAACTGGGA
TGATGTGTTCCACAAGCGTATTCCTCCACCCTACTTCCCGACAATCAGCGGAAGCGCCGATACCAGCAACTTCGA
CGAAGAGTTCACACGCGAACAGCCAACATTAACCCCAGTGCACGGTCAACTCTCTTCGCGAGACCAAGCCGAATT
CAACGGTTTCTCTTGGGTTGCGAGTTGGGCGGATATCTAATGAACGAATGGCAAGAATTACGGACAGGACAATTG
TTTCGCATCTTTATATCGCCTACTTTTCTTTATGCAGTCTGTAGTAGTGTTTACCTCCTCCCCCGTTGTTGTGGA
TGTACCACCCTTTGCCCCAGAGGCATCTGATTTCTATTTATACCATTTCCCTCTC
Length 3580

Gene

Sequence id CopciAB_419097.T0
Sequence >CopciAB_419097.T0
ATCTTTCTTCCTCCTCGTCGCTGCCTCCAGCGGCGACTGCTCAGTAACATCTACCACAATGGTAAGGGGGCGCGA
CGCCTCACACATATACAGACCTAGAGACTAATCGATTGAATGTCTGATTTCGTCAGGATGAACTCGACCAGAAGA
TTGGGGACACTTGGCGGCGCATCCAGACAGAGCGCAAGATTCTTGAGGCGACCCAGCATCTGCGGCTGGCGACGA
CGAACCAAGATGTCCTCAAGCGCAACGATGCAAAGGTCAGAGAGACAGAGCGCAGTCTCGCCTATCTAGAGGGCG
TCCTTCGCGAGCTGCAGACCCGGAAAGCACAGCAAATGCAACAAGGTGATCCTTCACGATTTCCCTCTGGGCCTA
CGCCTCAAGTATGTATGCAACGCCAGATAGAAGCCTCTGTGTCCAATTGACTGCTTTTGTCCTTACAGGTACCAC
CAAAGGATTTCGATGGGCGCGGCTTTTCCCCCGACGGCACCGTCGCTCGACCCCAGAGGAAGCAATATACCAACC
TCGATCTCATCAAGGCTGATACCCCGTTCACACCCAGGAAAATCTCGCGTACTCTCCACCAGTTAGAATTCAAGC
TCCAGGTCGAAAAACAATACAAACTCGGCATAGATAAGATGGCAAAATTGTACCAAGCTGACGGCGACAAGAAAT
CGAAAGCGGACGCAGAGGCCAAGCGGATCGAGAGCGACAAGAAGATTCAGCTCCTCGAAACCGCATTGAAGCGTT
ATCGAAACCTTCATGTACTCGACGATGTAGCCGAAGACGATGAGCAAGGTTCGGGTATAATTCATCGTTCACACC
TCTCTAATTAAACCCCATCATATCAGACACTGGGACCGAAGGCGACCGTCGAGAGAAATTGCGCGCGAAACCTCT
CTCTGGTACCCTCTATGTCACCGTCAAGGGAGCTCGCGAGCTCGACCATGCCCCGGTTGTCACGCGCTTCCGTTC
ATCAGCGAAGCAGGTCACCGAAACACATGTCTCTATCAAGGCCGAAGGCAATCAATTGGCTCGATCGCATCCCTC
GCGGACGGACCGCTGGAATGAAGATTTCGAGATCGCCGTCGAAAAAGCCAACGAAATCGAAATCGTCCTTTACGA
CAAGCAAGTCAGCGAGCCACATGCAGTCCCCATTGGCCTGCTATGGATCAAGATCACTGACCTTGTTGACGCCCT
TCGTCGGCAGAAGATTGGTCAGGAAAGTCAAGGAGGATGGGTGACAGCTAATGCGATGCACGGGGATGGTCCAAT
GGGACCCGGCGGGATCCACCACCACCCAAGCCAGCCCATTACTGGCGACATTAACGCACCTATCGCATTCCAAGA
CAACCTTTCTGCTTCCGGTCATGGGGCTAGTCATACCGAAGGAATCGAGGCATGGTTTTCGGTCGAGCCAGCTGG
TGCAATTGCCCTTCAACTCAACTTCGGTGAGTTCCTTCACCATCGCCCTATCGCCCCCTTCCTAACAAAGGTTTA
AGTTAAGGAAAATGTCCGCAAGCGTCCTTTCGATGCGCCGCTTGGTGGCCTTGGGCGCCAAGGCGCCGTCCGCAA
GCGCAAGGGCGATGTACACGAAATGAATGGCCACAAGTTCATCCAACGCCAATTCTACCAGCTGATGAAATGCGC
ATTCTGCGGCGACTTCCTTCTCAATGCCGCCGGTTACCAATGCGAGGATTGTCGGTACACTTGTCACCAAAAATG
CTATGAGAAAGTGGTCACCAAATGTATATCCAAGTCAAGCACAGGGGTAGGTGTCTATCTATTATTATGAGACGA
AACGGCTCATCATGTCTTCACCTGCAGGAGGACGAGGATAAGATCAATCATCGTATTCCTCACCGATTCGAATCA
ATCACCAATATCGGTGCCAACTGGTGTTGCCATTGTGGCTACATGCTTCCCTTTGGCCGCAAGAATGCCCGCCGT
TGCACAGAATGCGACATCACTTGCCACGCCAATTGCGCACATTTGGTTCCCGATTTCTGCGGTATGAGGATGGAG
GTTGCGAACGAACTCCTCCGAAGTATGCAGGATATCAAGCGAAGACGCGAAGATCGCGAGCAACGACGCCCTCCC
ACTCACCAGCCCGAGCAGCTCCATACTTCGACGCCTTCCCTCGATGCCAGGTTGGGCCAGATGACTCTAGGAGGG
CCACCCCAGCACGAACCGGGTCCCCCGGCACAGTTGCCTTCCAGTGATCCATTTGGACGACAAATGCCAATGCCC
GCTCCTCAGACCTACGGGCCACCTCCGGATAGATCTTACTATTCCCAATCGCCACCTCCGCCTGCTCAATCTCCC
CCTTATGGATCACCTCCTACCCAACAGATGCCGCCTCGCCCTCCAGGGGCCCGAGTACCAGTCCCTTATCAGCAG
GAGCATCAAGCACCACCTCGACCTCCGCCTGGAGCGTACGACCCAAGTGCCTCTGGATATGGCTCTCCCTATACG
GTAAGTTGCGTTGCTTTGGAAATCAACAGAGGCTCATGGCGGATAGCAGAGCCCTCGATCTCAGCCACAAGGGCT
CCCCGAGAAACCTTCATTACCTTCCGTTCCTCAGCAGCAACAGTACCAGCAACAGCGACCCCCCGTTGGACTGCC
TCCTCATGTCCAGCCTCAACGCATCCCTCCGCCTCAAGCTGCCCCCCAGCAAGGCATGGTCCCGCCCCAACACCA
ACAACAGATGATACAGGCTCAGCCGCAGCGTCAACCCTCGAAGAAGCGGAAGGTCGGATTGGACGATTTCAACTT
CCTTGCAGTCCTTGGAAAGGGTAATTTCGGAAAGGTCATGTTGGCGGAGGAAAAAAAGACGAATGGACTATATGC
GATCAAGGTTTTGAAGAAGGAGTTTATCATCGACAACGATGAAGTTGAGAGGTGAATGGTAACTGACTTTGTCGC
CGGACGTCTGCTCACTGCTCGATATCTAGCACGCGTTCCGAAAAGCGCGTTTTCTTGACCGCTGCAAAGGAGCGC
CATCCCTTCCTTTTGGGTCTTCACTCGTGCTTCCAGACTGAAACTCGGATATACTTTGTGATGGAATATGTCAGT
GGTGGTGACTTGATGCTGCACATTCAGCGGAAGCAGTTCTCGCTGCGTCAGGCCAAGTTCTACGCATCGGAGGTC
CTGTTGGCTTTGGAGTACTTCCACCAAAACGGCATCATCTATCGGTGTGTTTCTTCCTTCATTTGGCATGACTTG
TTGCTAAATCCCGAGCTAGTGATCTCAAGCTCGACAATATCCTGCTTACTCTCGACGGACATGTCAAGGTTGCCG
ATTACGGTCTCTGCAAGGAACAGATGTGGTATGGTCAGACGACGAGCACTTTCTGTGGCACTCCAGAGTTCATGG
CGCCCGAAGTGGGTCACAATTGTTGCTGTCGAGAGGTCCCTTTCTAATCGCTTCCTAGATTTTGCTTGAGCAACG
ATACGGTCGAGCTGTCGACTGGTGGGCGTTTGGTGTATTGACCTATGAAATGTTGTTGGGTCAATCACCCTTCCG
AGGAGACGACGAAGATGAAATCTTCGACGCAATCCTGGAAGACGAGCCATTGTATCCCATTACCATGCCTCGTGA
CGCTGTGTCGATATTGCAAAAGGTTCGTTTTCTCTCATTTGAACATTTCTTTTTATTTTCGCTTACGCCGTAAAA
CAGCTGTTGACGAGGGACCCTGCTCGTCGTCTCGGATCAGGAAAGGAGGACGCCGAAGAAATCAAAAGACAGCCT
TTCTTCAAGGATGTCAACTGGGATGATGTGTTCCACAAGCGTATTCCTCCACCCTACTTCCCGACAATCGTGAGT
CGCCTTTGGTTCGACTGTGCTACATCCATTGCTGATGATCCTTCTTGCAGAGCGGAAGCGCCGATACCAGCAACT
TCGACGAAGAGTTCACACGCGAACAGCCAACATTAACCCCAGTGCACGGTCAACTCTCTTCGCGAGACCAAGCCG
AATTCAACGGTTTCTCTTGGGTGAGTTCGTTTATCCGTATCTTGATTAATCCCTTAACCTTTGATCTATCTCGTC
AGGTTGCGAGTTGGGCGGATATCTAATGAACGAATGGCAAGAATTACGGACAGGACAATTGTTTCGCATCTTTAT
ATCGCCTACTTTTCTTTATGCAGTCTGTAGTAGTGTTTACCTCCTCCCCCGTTGTTGTGGATGTACCACCCTTTG
CCCCAGAGGCATCTGATTTCTATTTATACCATTTCCCTCTC
Length 4241