CopciAB_430083
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_430083 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 430083
Uniprot id Functional description Cellulase (glycosyl hydrolase family 5)
Location scaffold_2:3068382..3072088 Strand +
Gene length (nt) 3707 Transcript length (nt) 3659
CDS length (nt) 3327 Protein length (aa) 1108

Reciprocal best hits in model fungi

Strain name Gene / Protein name
Neurospora crassa NCU02233
Saccharomyces cerevisiae YIR007W_YIR007W
Aspergillus nidulans AN3013

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7260938 48.4 0 1122
Hypsizygus marmoreus strain 51987-8 Hypma_RDB19404 54.6 0 1082
Pleurotus ostreatus PC15 PleosPC15_2_1056414 53.9 0 1073
Pleurotus eryngii ATCC 90797 Pleery1_1444949 53.6 0 1065
Flammulina velutipes Flave_chr09AA00385 50.9 0 1050
Pleurotus ostreatus PC9 PleosPC9_1_115324 53 0 1048
Lentinula edodes W1-26 v1.0 Lentinedodes1_15215 52.4 0 1044
Lentinula edodes NBRC 111202 Lenedo1_463385 52.1 0 1037
Ganoderma sp. 10597 SS1 v1.0 Gansp1_94718 47.9 2.175E-291 955
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_122667 49.2 3.224E-295 931
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_188502 49.1 3.32E-294 928
Grifola frondosa Grifr_OBZ75321 48.8 9.731E-293 924
Schizophyllum commune H4-8 Schco3_2603975 48.6 5.303E-282 893
Auricularia subglabra Aurde3_1_1274844 46.7 1.695E-269 857
Lentinula edodes B17 Lened_B_1_1_205 76.5 5.253E-69 256

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 314.8202 2.9557 1.7065
oidia 238.592 53.6769 30.9904
vegetative_mycelium 208.5661 8.2057 4.7375
primordia 215.6137 5.876 3.3925
hyphal_knot 197.36 23.9253 13.8133
young_fruiting_body 247.6461 21.5188 12.4239
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 120.2902 14.926 8.6175
Wheat bran 132.8998 12.7643 7.3695
Horse manure 194.6336 32.6087 18.8266
Oak leaves 138.9158 76.1061 43.9399
Hay 132.9068 16.5991 9.5835
Corn stalk 117.7756 2.9389 1.6968
Pectine 201.4945 11.8231 6.8261
Microcrystalline cellulose 98.5246 14.2058 8.2017
Xylose 123.1063 34.0309 19.6477
Cellobiose 106.2091 15.6486 9.0347
Lignin 137.1178 69.8605 40.334
Apple peels 192.7107 10.7202 6.1893
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 106.6038 18.1791 10.4957
Bsubtilis 175.8718 5.3784 3.1052
Ecoli 127.0529 9.459 5.4611
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 214.8155 22.5165 12.9999
BS 4h 63.4816 2.513 1.4509
BS 8h 48.6024 4.5311 2.6161
BS 12h 51.5242 10.2445 5.9147
Oidia 0 h 106.9575 18.8725 10.8961
Oidia 18 h 66.9095 26.6407 15.381
Sclerotia 75.0088 13.5715 7.8355
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 48.1446 9.2695 5.3518
DM 36h 71.2261 11.9633 6.907
DM 60h 77.074 9.256 5.344
DM 84h 79.9519 12.4421 7.1835
DM 108h 78.0169 4.6706 2.6966
DM 132h 83.522 14.8621 8.5806
DM 156hAE 69.3334 3.7527 2.1666
ELI1hAE 77.1463 12.2751 7.0871
ELI2hAE 71.9015 5.9596 3.4408
LI2hAE 74.3235 5.3717 3.1013
LI6hAE 90.8756 9.4433 5.4521
LI12hAE 92.6829 9.2344 5.3315
LI18hAE 71.7407 4.5888 2.6493
LI 24hAE 67.1125 3.614 2.0865
DM 156hAM 64.0949 13.8298 7.9846
ELI1hAM 56.7451 8.2873 4.7846
ELI2hAM 50.7282 4.4021 2.5416
LI2hAM 50.2249 5.3798 3.106
LI6hAM 89.4257 21.3163 12.307
LI12hAM 82.376 7.8364 4.5244
LI18hAM 85.3931 20.3513 11.7498
LI 24hAM 85.7887 26.0684 15.0506
LI 24hHK 86.2947 27.8779 16.0953
L/D 6h 91.4188 9.2718 5.3531
L/D 12h 73.3144 24.3301 14.047
L/D 18h 106.0894 11.1067 6.4124
L/D 24h 151.092 14.5362 8.3925
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 101.2459 8.5249 4.9218
Hyphal knots 180.3499 66.4211 38.3482
Primordium 1 146.8315 14.6726 8.4712
Primordium 2 121.4245 32.7773 18.924
Young Fruiting body cap 364.5699 64.9137 37.4779
Younf fruiting body gill 181.286 25.3111 14.6134
Young fruiting body stipe 261.8404 35.5653 20.5337
Mature fruiting body cap_gill 1443.9501 85.4783 49.3509
Mature fruiting body stipe 719.2135 204.3213 117.9649
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 90.6566 11.2142 6.4745
NH4NO3 207.93 19.3 11.1429
Proline 198.4146 67.9443 39.2277
Tryptophan 142.2204 42.694 24.6494
Isoleucin 207.0514 44.9752 25.9665
Arginine 325.0884 23.8416 13.7649
Metionine 213.4104 18.4833 10.6713
NaNO3 161.5236 10.5182 6.0727
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 90.6566 11.2142 6.4745
Citrus peel 145.7971 12.4408 7.1827
Poplar leaves 149.8044 12.8128 7.3975
Typha leaves 114.2408 4.0963 2.365
Overwintered Salix leaves 117.5086 5.4197 3.129
Reed flowering 114.9888 26.4421 15.2663
Tigernut 101.9482 4.6721 2.6974
Energy cane 118.146 7.6711 4.4289
Guar gum 125.7834 16.0779 9.2826
Apple peels 120.6939 4.2498 2.4536
Cellobiose 153.9289 8.9986 5.1953
Corn stalk 105.1465 2.913 1.6818
Horse manure 111.5581 9.8258 5.6729
Lignin 122.4415 13.3691 7.7187
Microcrystalline cellulose 171.8651 56.9941 32.9055
Oak leaves 122.6806 4.4435 2.5655
Pectin esterified 96.3292 21.2518 12.2697
Poplar sawdust 110.1478 15.2001 8.7758
Wheat bran 86.9397 9.2625 5.3477
Chlamydomonas reinhardtii 134.6197 3.1168 1.7995
Vertatryl alcohol 111.9193 9.1895 5.3056
Furfural 127.6442 26.1983 15.1256
Autoclaved mycelium 159.0982 29.2704 16.8993
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 141.7391 12.4324 7.1778
Ribose 202.3951 19.2488 11.1133
Mannose 193.6574 9.3545 6.6146
Fructose 182.7018 15.8902 9.1742
Arabinose 159.2113 21.7835 12.5767
Xylose 174.0251 8.3169 4.8018
Galacturonic acid 202.7782 10.4547 6.036
Rhamnogalacturonan 177.7922 16.1605 9.3303
Pectin esterified 202.1828 13.413 7.744
Polygalacturonic acid 174.7141 7.4536 4.3033
Sodium acetate 181.866 24.9699 14.4164
No nitrogen 159.5173 8.3637 4.8288
BSA 174.5679 6.4936 3.7491
Glutamine 172.7848 18.4914 10.676
No phosphate 160.9201 12.449 7.1874
No carbon 191.4171 0.4055 0.2867
No sulphur 209.227 14.7485 8.515
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 90.6566 11.2142 6.4745
Amylose 132.5284 5.5127 3.1827
Fucose 131.678 2.9569 1.7072
Galactose 173.7332 19.6701 11.3566
Lactose 159.1436 15.7321 9.0829
Maltose 155.2948 27.939 16.1306
Mannitol 187.4288 13.6242 7.8659
Rhamnose 171.8152 9.2263 5.3268
Sorbitol 138.0412 31.944 18.4429
Trehalose 133.266 17.4301 10.0633
Glycerol 167.385 18.8874 10.9046
Glucuronic acid 113.1025 3.2356 1.868
Arabinan 100.1814 17.5846 10.1524
Galactan 142.1877 11.5142 6.6478
Galactomannan 77.2632 30.6716 17.7083
Glucan 119.8516 26.848 15.5007
Xylan 113.2777 8.3113 4.7986
Xyloglucan 99.8341 13.2991 7.6782
Arabinogalactan 126.8814 23.4401 13.5331
Pectin 73.1139 16.6075 9.5883
Rhamnogalacturonan 81.1385 10.5616 6.0978
Polygalacturonic acid 157.2947 18.5266 10.6964
Mannan 132.0153 4.3229 2.4958
Amylopectin 153.8944 19.7901 11.4258
Inulin 241.3466 61.0843 35.2671
BSA 134.4478 17.1953 9.9277
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 77.074 9.256 5.344
2h WAT 64.3714 10.3844 5.9954
4h WAT 63.4866 15.1678 8.7571
8h WAT 59.4196 4.4832 2.5884
16h WAT 73.2545 7.8415 4.5273
24h WAT 67.8723 6.1725 3.5637
WAT hyphal knot -30h 69.4892 4.0863 2.3592
WAT hyphal knot -22h 81.1013 11.3578 6.5574
WAT hyphal knot -15h 87.6309 6.3923 3.6906
WAT hyphal knot -7.5h 85.68 14.3678 8.2952
WAT hyphal knot 84.8077 11.9938 6.9246
WAT hyphal knot +7.5h 85.985 16.988 9.808
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 162.4937 17.2817 9.9776
Straw 3h 157.1401 9.4943 5.4816
Straw 6h 107.3153 5.9935 3.4603
Straw 12h 112.9157 14.9844 8.6512
Straw 24h 86.3689 15.0502 8.6892
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 130.6374 29.303 16.9181
Frost (-20C, 30min) 82.7038 11.7512 6.7846
Heat shock (47C, 2h) 108.1993 4.084 2.3579
High CO2 54.8652 3.901 2.2523
Drought (4% agar, 12h) 63.5039 7.0002 4.0416
Oxidative (1mM H2O2, 3h) 100.8251 13.6979 7.9085
Acidic (pH4, 3h) 127.3786 15.5258 8.9638
Alkaline (pH9, 3h) 102.7215 12.7123 7.3395
Osmotic (sorbitol 2h) 147.2402 15.5173 8.9589
CongoRed (3h) 109.3967 25.7935 14.8919
Cobalt chloride control 69.233 18.4654 10.661
Cobalt chloride 2mM 115.5132 12.8266 7.4054
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 88.7148 17.0647 9.8523
Cold stimulation 78.366 15.7912 9.1171
Scratched surface 52.2339 3.8161 2.2032
Ca2+, 200mM, 24h 71.7473 6.8037 3.9281
Cu2+, 2mM, 6h 64.336 17.5747 10.1467
Voriconazole 190.3572 22.3012 12.8756
Trichoderma interaction, early 62.1337 4.9372 2.8505
Trichoderma interaction 60h 86.8739 10.6662 6.1581
Cobalt chloride 2mM repeat 98.9924 15.6571 9.0396
Hypoxia 77.319 19.1132 11.035
Hypoxia control 83.6961 12.1209 6.998
Protoplastation control 89.496 4.2367 2.9958
Protoplastation 3.5h 125.1498 51.1489 36.1677
Protoplastation 1.5h 126.1754 29.9583 21.1838

General data

Systematic name -
Protein id CopciAB_430083.T0
Description Cellulase (glycosyl hydrolase family 5)

Annotation summary

0 300 600 900 1108

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00150 Cellulase (glycosyl hydrolase family 5) IPR001547 88 278
Pfam PF18564 Glycoside hydrolase family 5 C-terminal domain IPR041036 758 825

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR041036 Glycoside hydrolase family 5, C-terminal domain
IPR001547 Glycoside hydrolase, family 5
IPR018087 Glycoside hydrolase, family 5, conserved site
IPR017853 Glycoside hydrolase superfamily

GO

Go id Term Ontology
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds MF
GO:0071704 organic substance metabolic process BP
GO:0005975 carbohydrate metabolic process BP

KEGG

KEGG Orthology
No records

EggNOG

COG category Description
E Cellulase (glycosyl hydrolase family 5)

CAZy

Class Family Subfamily
GH GH5 GH5_12

Transcription factor

Group
No records

Conservation of CopciAB_430083 across fungi.

Arrow shows the origin of gene family containing CopciAB_430083.

Protein

Sequence id CopciAB_430083.T0
Sequence >CopciAB_430083.T0
MPRVPSTSPATGQPVPPSYIHTFNYNFVDTSGRTLLLRGVNLSGASKAPVGHLSHQLDDFWDSAEAGGESFIRRP
LNLDDGSADVHLARLRGWGFNMLRFPITWEALEHEGPGKYDDEFIDYTIRVLQKCRDYGFRVFMDPHQDTWSRFS
GGSGAPFWTLAACGINPNNITATQSAIVHCEYPLAHAPDPASLPAMIWSTNYGRLLSQTLFTLFFAGRTFAPLCV
IDDLNIQDYLQNHYIEAFGRLADRIREIDPSLYDNCIIGWDSLNEPFEGLCGWENLNANPTAQGSTLKKGTYPTP
AQSLRLGMGQPQTVENWSFGAFGPSRNGSVTIDPKGHKLWAEDSPDARWGFKRAESWPLGTCIWALHNVWDIQTG
YVLRPDYFKFHPETQEEVSFISDFWKPHFLAYSSRLRKSHPEAIWFVQPPVFAKPPQIATDDLRGRACYSPHYYD
GLTLITRHWNWFNADALGVLRGKYSSPIQAVKIGESAIRASIQSQLGILKSDALILGDYPTLIGEIGIPFDMDDK
RSYGWTDKGKYKGDYSRQVKALDASLNACDGPNGLNFTVWTFCPDDHSHEWGDGWNLEDLSLWSMADVWERERVE
KEAMMVDEEDRKSVGTVSTSSVGSSSRESLGSGTAPAVQLDQGVSSNNNSRVSLVNRKNRKRRKDGAEQMKPSLA
MVAAASSLSVATFGTVATASTLAGETSSPESRSKDIVNIKRTNDDNDTTSPTPSPALLASLGWHANPYDFLCDGA
RAVKAFSRPFPVKTVGTPKHIEFDVNKAVWKCTVVVTADDAPVYVKGVVEEGEGGETKKLGTEIYIPIVHFAHER
LLLDGDAEGKRRRRRRVEGASNKKGEDGVVVQSDSVSTLSLREGGDEVTPTPSVDPTPQALSIPMVGAAPIISKT
PSNAIRYTSVAARCPSEITLGAQPVVPYVGYSSEEDEVVEGAVDAYTDEDEPEGEDGGPLVDIEVFVSEGTWKVE
GQALFWWYDVPEAPPSASSTTESLGLPKPPYVTSASTTSVNTLSSRRSANANGRKDKLPPGVKEVTIEIRRRGGV
IKKEEEEGRKRRVVERGLRSGVYPSERVKSELRAGAKGRRKGDKGCCEELCSEGCVVM
Length 1108

Coding

Sequence id CopciAB_430083.T0
Sequence >CopciAB_430083.T0
ATGCCCCGCGTTCCCTCGACGTCGCCGGCGACTGGCCAGCCAGTCCCACCGTCCTACATCCACACATTCAACTAC
AACTTTGTCGACACCTCGGGACGAACCCTTTTACTGAGAGGCGTCAACCTCAGTGGCGCATCCAAGGCACCTGTT
GGCCACCTGTCCCACCAGCTCGATGATTTCTGGGACAGTGCAGAGGCTGGCGGCGAGAGTTTCATCAGGAGACCT
TTGAATTTAGACGATGGATCGGCGGACGTGCACCTGGCAAGACTGAGAGGATGGGGGTTTAATATGTTGCGATTT
CCGATTACCTGGGAGGCTTTGGAACACGAGGGGCCAGGGAAATACGACGATGAATTCATCGACTACACAATCCGA
GTCCTGCAAAAGTGCAGGGACTATGGGTTCAGAGTCTTCATGGACCCGCACCAAGACACTTGGTCCCGCTTCTCT
GGCGGCTCTGGCGCTCCATTCTGGACACTGGCTGCCTGCGGAATCAATCCCAACAACATCACCGCTACTCAATCC
GCCATCGTTCATTGCGAATACCCCCTCGCCCATGCTCCCGACCCAGCCTCGCTCCCAGCCATGATCTGGAGCACA
AACTACGGCAGACTATTGTCACAAACCCTATTCACCCTCTTCTTCGCTGGACGAACATTCGCGCCTCTCTGTGTC
ATCGACGACCTTAATATTCAAGATTATCTCCAAAATCACTATATCGAGGCATTCGGAAGACTGGCGGATCGTATA
CGCGAGATAGACCCCAGTCTGTACGACAACTGCATCATCGGCTGGGATTCCCTCAATGAGCCCTTTGAGGGTCTC
TGTGGATGGGAAAACCTGAACGCAAACCCTACAGCCCAGGGCTCCACACTCAAAAAGGGCACCTATCCCACTCCC
GCCCAGTCCCTTCGACTCGGCATGGGCCAGCCTCAAACAGTCGAGAACTGGTCCTTTGGCGCGTTTGGGCCCTCG
CGCAACGGCTCTGTCACCATCGATCCCAAAGGGCACAAACTATGGGCCGAAGATTCCCCTGACGCCCGTTGGGGG
TTCAAGCGCGCTGAATCATGGCCCCTAGGCACCTGCATATGGGCATTGCACAACGTCTGGGACATCCAAACCGGC
TACGTCCTCCGGCCCGACTACTTCAAATTCCACCCGGAAACCCAAGAAGAAGTCTCTTTCATCTCCGACTTCTGG
AAGCCCCACTTCCTCGCTTACTCTTCACGCCTGCGCAAATCCCACCCCGAGGCGATCTGGTTCGTCCAACCACCG
GTGTTTGCTAAACCGCCCCAGATAGCCACTGACGACCTCCGCGGACGGGCGTGCTATTCGCCGCACTATTATGAT
GGGCTGACGCTCATCACGCGGCACTGGAACTGGTTCAACGCGGACGCCTTGGGTGTGCTACGAGGCAAGTACTCC
TCACCCATCCAAGCCGTCAAAATTGGTGAATCAGCTATTCGAGCTTCGATCCAATCCCAACTCGGTATCCTCAAA
TCCGACGCTCTCATTCTTGGGGACTACCCCACCCTCATCGGGGAGATCGGCATCCCCTTTGATATGGACGATAAA
CGTTCGTATGGGTGGACGGATAAAGGAAAGTACAAGGGCGACTATTCGAGACAGGTCAAGGCTCTCGATGCGAGC
TTGAACGCGTGTGATGGACCGAATGGGCTGAACTTTACGGTGTGGACGTTCTGTCCGGACGATCATTCGCATGAG
TGGGGTGATGGGTGGAATTTGGAGGATTTGAGTTTGTGGAGTATGGCTGATGTGTGGGAGAGGGAGCGGGTGGAG
AAGGAGGCGATGATGGTTGATGAGGAGGATAGGAAGAGTGTTGGGACTGTTTCGACGAGTTCGGTGGGATCGAGC
TCGAGGGAGAGTTTGGGTTCTGGTACTGCACCTGCTGTACAACTGGATCAGGGTGTCAGCAGTAACAACAACTCG
CGGGTCTCGCTTGTCAACCGGAAGAATAGGAAACGGCGGAAGGATGGTGCAGAGCAGATGAAACCTTCGTTGGCG
ATGGTAGCTGCTGCTTCGTCGCTGAGCGTTGCTACCTTTGGTACAGTCGCGACTGCCAGCACGCTCGCTGGCGAA
ACCTCCAGTCCGGAATCGCGGTCAAAGGATATCGTCAATATCAAACGCACTAACGACGACAACGACACTACCTCG
CCTACCCCTTCACCCGCTCTCCTCGCTTCGCTCGGGTGGCACGCGAATCCCTACGACTTCCTCTGCGATGGTGCG
CGAGCGGTTAAAGCCTTCTCGCGCCCGTTCCCCGTCAAGACCGTCGGCACGCCCAAACACATCGAGTTTGATGTC
AACAAGGCGGTGTGGAAGTGCACTGTGGTGGTGACTGCGGACGACGCGCCGGTGTATGTCAAGGGCGTCGTGGAG
GAAGGCGAGGGTGGGGAGACGAAGAAGCTCGGGACGGAGATTTATATTCCTATTGTTCACTTTGCGCACGAACGG
CTGTTGTTAGATGGGGATGCCGAGGGGAAGAGGCGGAGGAGGAGGAGAGTGGAGGGAGCGAGTAACAAGAAGGGG
GAGGATGGGGTGGTCGTGCAGAGTGATAGTGTTTCGACTCTTTCGTTGAGAGAAGGAGGGGATGAAGTGACACCT
ACGCCTTCCGTGGATCCGACCCCGCAGGCATTGTCTATACCCATGGTTGGTGCTGCGCCGATTATCAGCAAGACT
CCCTCCAACGCAATCCGTTATACCTCTGTGGCTGCGAGGTGTCCGTCTGAGATCACGCTCGGGGCGCAGCCTGTT
GTTCCGTATGTTGGGTACTCGTCGGAGGAGGATGAGGTGGTGGAAGGTGCAGTTGACGCGTACACGGATGAGGAT
GAACCGGAAGGAGAAGATGGCGGGCCTTTGGTTGATATTGAAGTTTTTGTTAGTGAAGGGACGTGGAAAGTGGAA
GGACAGGCTTTGTTCTGGTGGTACGACGTCCCCGAAGCACCGCCCTCTGCGTCCTCGACGACTGAATCCCTCGGA
CTCCCTAAACCCCCGTATGTTACGTCCGCCTCTACGACTTCGGTTAACACCCTCTCCTCGCGTCGGAGCGCCAAC
GCGAATGGGAGGAAAGACAAGCTCCCACCTGGGGTGAAGGAGGTCACGATTGAGATTAGGAGAAGGGGAGGGGTG
ATTAAGAAAGAGGAAGAGGAGGGGAGGAAGAGGAGGGTTGTTGAGCGTGGTTTGAGGAGTGGGGTGTACCCTTCT
GAGAGAGTGAAGAGTGAGTTGAGGGCTGGTGCGAAGGGGCGGAGGAAAGGAGATAAGGGGTGTTGTGAGGAGTTG
TGTTCTGAGGGGTGTGTTGTTATGTGA
Length 3327

Transcript

Sequence id CopciAB_430083.T0
Sequence >CopciAB_430083.T0
ATCCTCGACCTCGATGCCCCGCGTTCCCTCGACGTCGCCGGCGACTGGCCAGCCAGTCCCACCGTCCTACATCCA
CACATTCAACTACAACTTTGTCGACACCTCGGGACGAACCCTTTTACTGAGAGGCGTCAACCTCAGTGGCGCATC
CAAGGCACCTGTTGGCCACCTGTCCCACCAGCTCGATGATTTCTGGGACAGTGCAGAGGCTGGCGGCGAGAGTTT
CATCAGGAGACCTTTGAATTTAGACGATGGATCGGCGGACGTGCACCTGGCAAGACTGAGAGGATGGGGGTTTAA
TATGTTGCGATTTCCGATTACCTGGGAGGCTTTGGAACACGAGGGGCCAGGGAAATACGACGATGAATTCATCGA
CTACACAATCCGAGTCCTGCAAAAGTGCAGGGACTATGGGTTCAGAGTCTTCATGGACCCGCACCAAGACACTTG
GTCCCGCTTCTCTGGCGGCTCTGGCGCTCCATTCTGGACACTGGCTGCCTGCGGAATCAATCCCAACAACATCAC
CGCTACTCAATCCGCCATCGTTCATTGCGAATACCCCCTCGCCCATGCTCCCGACCCAGCCTCGCTCCCAGCCAT
GATCTGGAGCACAAACTACGGCAGACTATTGTCACAAACCCTATTCACCCTCTTCTTCGCTGGACGAACATTCGC
GCCTCTCTGTGTCATCGACGACCTTAATATTCAAGATTATCTCCAAAATCACTATATCGAGGCATTCGGAAGACT
GGCGGATCGTATACGCGAGATAGACCCCAGTCTGTACGACAACTGCATCATCGGCTGGGATTCCCTCAATGAGCC
CTTTGAGGGTCTCTGTGGATGGGAAAACCTGAACGCAAACCCTACAGCCCAGGGCTCCACACTCAAAAAGGGCAC
CTATCCCACTCCCGCCCAGTCCCTTCGACTCGGCATGGGCCAGCCTCAAACAGTCGAGAACTGGTCCTTTGGCGC
GTTTGGGCCCTCGCGCAACGGCTCTGTCACCATCGATCCCAAAGGGCACAAACTATGGGCCGAAGATTCCCCTGA
CGCCCGTTGGGGGTTCAAGCGCGCTGAATCATGGCCCCTAGGCACCTGCATATGGGCATTGCACAACGTCTGGGA
CATCCAAACCGGCTACGTCCTCCGGCCCGACTACTTCAAATTCCACCCGGAAACCCAAGAAGAAGTCTCTTTCAT
CTCCGACTTCTGGAAGCCCCACTTCCTCGCTTACTCTTCACGCCTGCGCAAATCCCACCCCGAGGCGATCTGGTT
CGTCCAACCACCGGTGTTTGCTAAACCGCCCCAGATAGCCACTGACGACCTCCGCGGACGGGCGTGCTATTCGCC
GCACTATTATGATGGGCTGACGCTCATCACGCGGCACTGGAACTGGTTCAACGCGGACGCCTTGGGTGTGCTACG
AGGCAAGTACTCCTCACCCATCCAAGCCGTCAAAATTGGTGAATCAGCTATTCGAGCTTCGATCCAATCCCAACT
CGGTATCCTCAAATCCGACGCTCTCATTCTTGGGGACTACCCCACCCTCATCGGGGAGATCGGCATCCCCTTTGA
TATGGACGATAAACGTTCGTATGGGTGGACGGATAAAGGAAAGTACAAGGGCGACTATTCGAGACAGGTCAAGGC
TCTCGATGCGAGCTTGAACGCGTGTGATGGACCGAATGGGCTGAACTTTACGGTGTGGACGTTCTGTCCGGACGA
TCATTCGCATGAGTGGGGTGATGGGTGGAATTTGGAGGATTTGAGTTTGTGGAGTATGGCTGATGTGTGGGAGAG
GGAGCGGGTGGAGAAGGAGGCGATGATGGTTGATGAGGAGGATAGGAAGAGTGTTGGGACTGTTTCGACGAGTTC
GGTGGGATCGAGCTCGAGGGAGAGTTTGGGTTCTGGTACTGCACCTGCTGTACAACTGGATCAGGGTGTCAGCAG
TAACAACAACTCGCGGGTCTCGCTTGTCAACCGGAAGAATAGGAAACGGCGGAAGGATGGTGCAGAGCAGATGAA
ACCTTCGTTGGCGATGGTAGCTGCTGCTTCGTCGCTGAGCGTTGCTACCTTTGGTACAGTCGCGACTGCCAGCAC
GCTCGCTGGCGAAACCTCCAGTCCGGAATCGCGGTCAAAGGATATCGTCAATATCAAACGCACTAACGACGACAA
CGACACTACCTCGCCTACCCCTTCACCCGCTCTCCTCGCTTCGCTCGGGTGGCACGCGAATCCCTACGACTTCCT
CTGCGATGGTGCGCGAGCGGTTAAAGCCTTCTCGCGCCCGTTCCCCGTCAAGACCGTCGGCACGCCCAAACACAT
CGAGTTTGATGTCAACAAGGCGGTGTGGAAGTGCACTGTGGTGGTGACTGCGGACGACGCGCCGGTGTATGTCAA
GGGCGTCGTGGAGGAAGGCGAGGGTGGGGAGACGAAGAAGCTCGGGACGGAGATTTATATTCCTATTGTTCACTT
TGCGCACGAACGGCTGTTGTTAGATGGGGATGCCGAGGGGAAGAGGCGGAGGAGGAGGAGAGTGGAGGGAGCGAG
TAACAAGAAGGGGGAGGATGGGGTGGTCGTGCAGAGTGATAGTGTTTCGACTCTTTCGTTGAGAGAAGGAGGGGA
TGAAGTGACACCTACGCCTTCCGTGGATCCGACCCCGCAGGCATTGTCTATACCCATGGTTGGTGCTGCGCCGAT
TATCAGCAAGACTCCCTCCAACGCAATCCGTTATACCTCTGTGGCTGCGAGGTGTCCGTCTGAGATCACGCTCGG
GGCGCAGCCTGTTGTTCCGTATGTTGGGTACTCGTCGGAGGAGGATGAGGTGGTGGAAGGTGCAGTTGACGCGTA
CACGGATGAGGATGAACCGGAAGGAGAAGATGGCGGGCCTTTGGTTGATATTGAAGTTTTTGTTAGTGAAGGGAC
GTGGAAAGTGGAAGGACAGGCTTTGTTCTGGTGGTACGACGTCCCCGAAGCACCGCCCTCTGCGTCCTCGACGAC
TGAATCCCTCGGACTCCCTAAACCCCCGTATGTTACGTCCGCCTCTACGACTTCGGTTAACACCCTCTCCTCGCG
TCGGAGCGCCAACGCGAATGGGAGGAAAGACAAGCTCCCACCTGGGGTGAAGGAGGTCACGATTGAGATTAGGAG
AAGGGGAGGGGTGATTAAGAAAGAGGAAGAGGAGGGGAGGAAGAGGAGGGTTGTTGAGCGTGGTTTGAGGAGTGG
GGTGTACCCTTCTGAGAGAGTGAAGAGTGAGTTGAGGGCTGGTGCGAAGGGGCGGAGGAAAGGAGATAAGGGGTG
TTGTGAGGAGTTGTGTTCTGAGGGGTGTGTTGTTATGTGAGGATTTGGTCGGTGGAGGATGAGGAGGACGCTTTT
GCGTTTTGGTATGACTTTCTCTTTTCATTGTTCCGGCTCATTTGTATTATAGTTATGGCATCTTTTTCCTCTCGA
TTTTGTTTTCCTGGCTTTGTTACATGAACTATGACACGATTTTCAAATCCATCCTACAGACATATAGCCTTTTTG
CACGCCAAGTTAATACACGGCTTACGGTTTTCCAGGTAACTTACGATAGTCATTACTATACAGCCTTCTGTAGCG
CATACATACCAGTCAAACTCGTTCATGTTGTGCTCGAAATCAAGTTCGATTTGTCGCGG
Length 3659

Gene

Sequence id CopciAB_430083.T0
Sequence >CopciAB_430083.T0
ATCCTCGACCTCGATGCCCCGCGTTCCCTCGACGTCGCCGGCGACTGGCCAGCCAGTCCCACCGTCCTACATCCA
CACATTCAACTACAACTTTGTCGACACCTCGGGACGAACCCTTTTACTGAGAGGCGTCAACCTCAGTGGCGCATC
CAAGGCACCTGTTGGCCACCTGTCCCACCAGCTCGATGATTTCTGGGACAGTGCAGAGGCTGGCGGCGAGAGTTT
CATCAGGAGACCTTTGAATTTAGACGATGGATCGGCGGACGTGCACCTGGCAAGACTGAGAGGATGGGGGTTTAA
TATGTTGCGATTTCCGATTACCTGGGAGGCTTTGGAACACGAGGGGCCGTAAGTCGCTTTTATTATTTTCGTAAC
CAACCTCTAAATGATCTATAGAGGGAAATACGACGATGAATTCATCGACTACACAATCCGAGTCCTGCAAAAGTG
CAGGGACTATGGGTTCAGAGTCTTCATGGACCCGCACCAAGACACTTGGTCCCGCTTCTCTGGCGGCTCTGGCGC
TCCATTCTGGACACTGGCTGCCTGCGGAATCAATCCCAACAACATCACCGCTACTCAATCCGCCATCGTTCATTG
CGAATACCCCCTCGCCCATGCTCCCGACCCAGCCTCGCTCCCAGCCATGATCTGGAGCACAAACTACGGCAGACT
ATTGTCACAAACCCTATTCACCCTCTTCTTCGCTGGACGAACATTCGCGCCTCTCTGTGTCATCGACGACCTTAA
TATTCAAGATTATCTCCAAAATCACTATATCGAGGCATTCGGAAGACTGGCGGATCGTATACGCGAGATAGACCC
CAGTCTGTACGACAACTGCATCATCGGCTGGGATTCCCTCAATGAGCCCTTTGAGGGTCTCTGTGGATGGGAAAA
CCTGAACGCAAACCCTACAGCCCAGGGCTCCACACTCAAAAAGGGCACCTATCCCACTCCCGCCCAGTCCCTTCG
ACTCGGCATGGGCCAGCCTCAAACAGTCGAGAACTGGTCCTTTGGCGCGTTTGGGCCCTCGCGCAACGGCTCTGT
CACCATCGATCCCAAAGGGCACAAACTATGGGCCGAAGATTCCCCTGACGCCCGTTGGGGGTTCAAGCGCGCTGA
ATCATGGCCCCTAGGCACCTGCATATGGGCATTGCACAACGTCTGGGACATCCAAACCGGCTACGTCCTCCGGCC
CGACTACTTCAAATTCCACCCGGAAACCCAAGAAGAAGTCTCTTTCATCTCCGACTTCTGGAAGCCCCACTTCCT
CGCTTACTCTTCACGCCTGCGCAAATCCCACCCCGAGGCGATCTGGTTCGTCCAACCACCGGTGTTTGCTAAACC
GCCCCAGATAGCCACTGACGACCTCCGCGGACGGGCGTGCTATTCGCCGCACTATTATGATGGGCTGACGCTCAT
CACGCGGCACTGGAACTGGTTCAACGCGGACGCCTTGGGTGTGCTACGAGGCAAGTACTCCTCACCCATCCAAGC
CGTCAAAATTGGTGAATCAGCTATTCGAGCTTCGATCCAATCCCAACTCGGTATCCTCAAATCCGACGCTCTCAT
TCTTGGGGACTACCCCACCCTCATCGGGGAGATCGGCATCCCCTTTGATATGGACGATAAACGTTCGTATGGGTG
GACGGATAAAGGAAAGTACAAGGGCGACTATTCGAGACAGGTCAAGGCTCTCGATGCGAGCTTGAACGCGTGTGA
TGGACCGAATGGGCTGAACTTTACGGTGTGGACGTTCTGTCCGGACGATCATTCGCATGAGTGGGGTGATGGGTG
GAATTTGGAGGATTTGAGTTTGTGGAGTATGGCTGATGTGTGGGAGAGGGAGCGGGTGGAGAAGGAGGCGATGAT
GGTTGATGAGGAGGATAGGAAGAGTGTTGGGACTGTTTCGACGAGTTCGGTGGGATCGAGCTCGAGGGAGAGTTT
GGGTTCTGGTACTGCACCTGCTGTACAACTGGATCAGGGTGTCAGCAGTAACAACAACTCGCGGGTCTCGCTTGT
CAACCGGAAGAATAGGAAACGGCGGAAGGATGGTGCAGAGCAGATGAAACCTTCGTTGGCGATGGTAGCTGCTGC
TTCGTCGCTGAGCGTTGCTACCTTTGGTACAGTCGCGACTGCCAGCACGCTCGCTGGCGAAACCTCCAGTCCGGA
ATCGCGGTCAAAGGATATCGTCAATATCAAACGCACTAACGACGACAACGACACTACCTCGCCTACCCCTTCACC
CGCTCTCCTCGCTTCGCTCGGGTGGCACGCGAATCCCTACGACTTCCTCTGCGATGGTGCGCGAGCGGTTAAAGC
CTTCTCGCGCCCGTTCCCCGTCAAGACCGTCGGCACGCCCAAACACATCGAGTTTGATGTCAACAAGGCGGTGTG
GAAGTGCACTGTGGTGGTGACTGCGGACGACGCGCCGGTGTATGTCAAGGGCGTCGTGGAGGAAGGCGAGGGTGG
GGAGACGAAGAAGCTCGGGACGGAGATTTATATTCCTATTGTTCACTTTGCGCACGAACGGCTGTTGTTAGATGG
GGATGCCGAGGGGAAGAGGCGGAGGAGGAGGAGAGTGGAGGGAGCGAGTAACAAGAAGGGGGAGGATGGGGTGGT
CGTGCAGAGTGATAGTGTTTCGACTCTTTCGTTGAGAGAAGGAGGGGATGAAGTGACACCTACGCCTTCCGTGGA
TCCGACCCCGCAGGCATTGTCTATACCCATGGTTGGTGCTGCGCCGATTATCAGCAAGACTCCCTCCAACGCAAT
CCGTTATACCTCTGTGGCTGCGAGGTGTCCGTCTGAGATCACGCTCGGGGCGCAGCCTGTTGTTCCGTATGTTGG
GTACTCGTCGGAGGAGGATGAGGTGGTGGAAGGTGCAGTTGACGCGTACACGGATGAGGATGAACCGGAAGGAGA
AGATGGCGGGCCTTTGGTTGATATTGAAGTTTTTGTTAGTGAAGGGACGTGGAAAGTGGAAGGACAGGCTTTGTT
CTGGTGGTACGACGTCCCCGAAGCACCGCCCTCTGCGTCCTCGACGACTGAATCCCTCGGACTCCCTAAACCCCC
GTATGTTACGTCCGCCTCTACGACTTCGGTTAACACCCTCTCCTCGCGTCGGAGCGCCAACGCGAATGGGAGGAA
AGACAAGCTCCCACCTGGGGTGAAGGAGGTCACGATTGAGATTAGGAGAAGGGGAGGGGTGATTAAGAAAGAGGA
AGAGGAGGGGAGGAAGAGGAGGGTTGTTGAGCGTGGTTTGAGGAGTGGGGTGTACCCTTCTGAGAGAGTGAAGAG
TGAGTTGAGGGCTGGTGCGAAGGGGCGGAGGAAAGGAGATAAGGGGTGTTGTGAGGAGTTGTGTTCTGAGGGGTG
TGTTGTTATGTGAGGATTTGGTCGGTGGAGGATGAGGAGGACGCTTTTGCGTTTTGGTATGACTTTCTCTTTTCA
TTGTTCCGGCTCATTTGTATTATAGTTATGGCATCTTTTTCCTCTCGATTTTGTTTTCCTGGCTTTGTTACATGA
ACTATGACACGATTTTCAAATCCATCCTACAGACATATAGCCTTTTTGCACGCCAAGTTAATACACGGCTTACGG
TTTTCCAGGTAACTTACGATAGTCATTACTATACAGCCTTCTGTAGCGCATACATACCAGTCAAACTCGTTCATG
TTGTGCTCGAAATCAAGTTCGATTTGTCGCGG
Length 3707