CopciAB_446224
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_446224 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 446224
Uniprot id Functional description Protein tyrosine kinase
Location scaffold_10:2088399..2093189 Strand -
Gene length (nt) 4791 Transcript length (nt) 4098
CDS length (nt) 3870 Protein length (aa) 1289

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7263929 48.4 0 1089
Hypsizygus marmoreus strain 51987-8 Hypma_RDB18261 40.3 8.143E-304 965
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_132545 42.3 5.444E-291 927
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_187489 41.8 6.652E-287 915
Ganoderma sp. 10597 SS1 v1.0 Gansp1_138451 39.7 1.666E-274 879
Grifola frondosa Grifr_OBZ74270 40.2 2.753E-265 852
Flammulina velutipes Flave_chr01AA00426 40.8 7.154E-262 842
Pleurotus ostreatus PC15 PleosPC15_2_1078986 38.1 1.801E-257 829
Pleurotus eryngii ATCC 90797 Pleery1_1507416 40 4.016E-227 740
Lentinula edodes NBRC 111202 Lenedo1_1177310 29.4 2.007E-203 670
Auricularia subglabra Aurde3_1_1271681 32.4 2.77E-174 584
Lentinula edodes W1-26 v1.0 Lentinedodes1_15355 36.3 1.697E-174 584
Schizophyllum commune H4-8 Schco3_2737152 36.9 9.566E-166 558
Lentinula edodes B17 Lened_B_1_1_17497 34.5 1.049E-110 390
Pleurotus ostreatus PC9 PleosPC9_1_58721 47.7 2.541E-96 345

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 221.7779 6.59 3.8047
oidia 179.7685 2.5125 1.4506
vegetative_mycelium 198.2816 17.0908 9.8674
primordia 75.3251 5.4056 3.1209
hyphal_knot 222.2407 12.3402 7.1246
young_fruiting_body 182.3917 15.2502 8.8047
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 314.0406 77.9453 45.0018
Wheat bran 191.9652 50.755 29.3034
Horse manure 235.2118 57.4759 33.1838
Oak leaves 298.7478 32.0315 18.4934
Hay 222.7505 28.9465 16.7123
Corn stalk 261.0533 31.3599 18.1057
Pectine 236.3586 21.56 12.4477
Microcrystalline cellulose 232.5182 29.2071 16.8627
Xylose 321.3978 50.9658 29.4251
Cellobiose 393.1403 37.0619 21.3977
Lignin 215.8305 12.8272 7.4058
Apple peels 323.8646 16.3872 9.4611
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 248.9827 6.2806 3.6261
Bsubtilis 246.8258 26.9276 15.5467
Ecoli 206.0992 10.3691 5.9866
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 1.9712 0.4054 0.2341
BS 4h 2.5852 1.9582 1.1306
BS 8h 3.7089 0.2263 0.1306
BS 12h 4.3638 0.3111 0.1796
Oidia 0 h 10.207 3.5681 2.06
Oidia 18 h 19.2186 1.6465 0.9506
Sclerotia 33.0934 4.5769 2.6425
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 36.0693 2.5081 1.4481
DM 36h 29.6857 2.7159 1.568
DM 60h 34.5445 1.4349 0.8284
DM 84h 38.1514 2.4818 1.4328
DM 108h 42.5943 3.4132 1.9706
DM 132h 40.6176 2.4236 1.3993
DM 156hAE 76.4972 6.0305 3.4817
ELI1hAE 36.7403 1.6831 0.9718
ELI2hAE 39.1553 8.225 4.7487
LI2hAE 34.4214 3.8007 2.1943
LI6hAE 39.8753 4.1231 2.3805
LI12hAE 38.6546 2.4171 1.3955
LI18hAE 38.8022 1.1078 0.6396
LI 24hAE 68.2143 11.8053 6.8158
DM 156hAM 55.6 0.1798 0.1038
ELI1hAM 33.7723 4.5069 2.602
ELI2hAM 28.6857 4.5794 2.6439
LI2hAM 31.7451 3.4311 1.981
LI6hAM 43.431 8.4252 4.8643
LI12hAM 37.6702 3.0942 1.7864
LI18hAM 37.7125 4.3645 2.5198
LI 24hAM 53.8896 2.0593 1.1889
LI 24hHK 59.1482 2.7371 1.5803
L/D 6h 72.5479 5.2526 3.0326
L/D 12h 90.0127 19.1826 11.0751
L/D 18h 60.7308 13.6021 7.8532
L/D 24h 48.875 1.4575 0.8415
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 149.642 9.589 5.5362
Hyphal knots 261.7714 15.3018 8.8345
Primordium 1 250.6434 81.8245 47.2414
Primordium 2 267.908 55.6004 32.1009
Young Fruiting body cap 351.9002 127.0018 73.3246
Younf fruiting body gill 93.3546 58.2497 33.6305
Young fruiting body stipe 174.0532 38.8252 22.4157
Mature fruiting body cap_gill 1212.9129 26.8619 15.5087
Mature fruiting body stipe 915.3851 288.1812 166.3815
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 335.8753 6.162 3.5577
NH4NO3 253.379 13.6797 7.898
Proline 235.6166 15.6275 9.0226
Tryptophan 220.0081 27.0181 15.5989
Isoleucin 227.1832 4.9504 2.8581
Arginine 263.0197 14.2975 8.2547
Metionine 253.8632 15.3416 8.8575
NaNO3 238.8742 3.1592 1.824
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 335.8753 6.162 3.5577
Citrus peel 189.364 41.6126 24.0251
Poplar leaves 262.147 17.6129 10.1688
Typha leaves 233.6858 50.1883 28.9762
Overwintered Salix leaves 238.4686 42.2412 24.3879
Reed flowering 243.6448 13.6531 7.8826
Tigernut 191.4899 22.3217 12.8874
Energy cane 271.5749 32.792 18.9325
Guar gum 245.8357 41.3063 23.8482
Apple peels 151.7893 33.6851 19.4481
Cellobiose 191.0429 15.648 9.0344
Corn stalk 223.584 25.4127 14.672
Horse manure 277.5959 45.2688 26.136
Lignin 204.8443 112.9901 65.2349
Microcrystalline cellulose 196.777 43.7644 25.2674
Oak leaves 227.4073 52.9627 30.578
Pectin esterified 143.1775 22.6145 13.0565
Poplar sawdust 233.9547 56.0853 32.3809
Wheat bran 178.1326 21.1974 12.2383
Chlamydomonas reinhardtii 276.3409 32.403 18.7079
Vertatryl alcohol 262.8364 12.1448 7.0118
Furfural 167.1578 21.4151 12.364
Autoclaved mycelium 271.7279 6.6658 3.8485
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 270.4681 12.8522 7.4202
Ribose 302.4144 8.4072 4.8539
Mannose 302.0013 41.5597 29.3871
Fructose 322.6438 25.5275 14.7383
Arabinose 337.5329 16.4164 9.478
Xylose 295.1059 13.6884 7.903
Galacturonic acid 311.9611 8.9375 5.1601
Rhamnogalacturonan 298.2 10.9986 6.3501
Pectin esterified 294.7251 15.3341 8.8532
Polygalacturonic acid 311.2074 27.1348 15.6663
Sodium acetate 310.7828 10.7749 6.2209
No nitrogen 272.0905 26.6843 15.4062
BSA 305.9936 21.9607 12.679
Glutamine 295.715 16.7301 9.6592
No phosphate 232.2483 6.0632 3.5006
No carbon 302.6062 6.4975 4.5945
No sulphur 296.8262 18.0647 10.4296
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 335.8753 6.162 3.5577
Amylose 234.1003 6.0908 3.5165
Fucose 249.6244 18.2383 10.5299
Galactose 268.0305 5.4591 3.1518
Lactose 234.8069 21.2505 12.269
Maltose 248.1505 23.5104 13.5737
Mannitol 249.6458 24.7193 14.2717
Rhamnose 275.3567 39.1025 22.5758
Sorbitol 237.9348 18.8136 10.862
Trehalose 234.9724 29.9607 17.2978
Glycerol 245.3773 40.9951 23.6685
Glucuronic acid 284.512 18.5373 10.7025
Arabinan 220.5016 25.7134 14.8456
Galactan 237.8644 18.742 10.8207
Galactomannan 252.0695 22.9589 13.2553
Glucan 275.9059 35.9834 20.775
Xylan 237.6212 51.3643 29.6552
Xyloglucan 262.4801 19.7158 11.3829
Arabinogalactan 271.491 20.395 11.775
Pectin 232.1499 94.7308 54.6928
Rhamnogalacturonan 275.0676 35.5488 20.5241
Polygalacturonic acid 303.7414 38.3836 22.1608
Mannan 278.1104 18.4852 10.6724
Amylopectin 204.3637 23.496 13.5654
Inulin 216.1747 10.3812 5.9936
BSA 285.1775 9.9406 5.7392
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 34.5445 1.4349 0.8284
2h WAT 39.3838 6.5664 3.7911
4h WAT 41.7012 3.6846 2.1273
8h WAT 35.3069 3.505 2.0236
16h WAT 41.0933 4.2429 2.4496
24h WAT 42.1808 9.6196 5.5539
WAT hyphal knot -30h 32.6944 4.5736 2.6406
WAT hyphal knot -22h 29.2553 4.5535 2.629
WAT hyphal knot -15h 36.2028 8.9182 5.1489
WAT hyphal knot -7.5h 41.7267 0.8426 0.4865
WAT hyphal knot 42.5021 2.1188 1.2233
WAT hyphal knot +7.5h 44.6784 3.8205 2.2058
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 156.7737 48.4893 27.9953
Straw 3h 130.677 45.5152 26.2782
Straw 6h 129.9574 27.0167 15.5981
Straw 12h 196.3323 12.2904 7.0959
Straw 24h 173.9084 32.5765 18.8081
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 26.0181 2.4642 1.4227
Frost (-20C, 30min) 29.146 3.7443 2.1617
Heat shock (47C, 2h) 112.7912 5.1277 2.9605
High CO2 35.2417 3.304 1.9076
Drought (4% agar, 12h) 31.5246 4.7671 2.7523
Oxidative (1mM H2O2, 3h) 57.6898 20.5319 11.8541
Acidic (pH4, 3h) 25.5859 4.2667 2.4634
Alkaline (pH9, 3h) 22.2594 3.3895 1.9569
Osmotic (sorbitol 2h) 20.9748 5.0116 2.8934
CongoRed (3h) 25.0891 8.2795 4.7802
Cobalt chloride control 29.5031 2.7456 1.5852
Cobalt chloride 2mM 30.5586 2.4328 1.4046
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 26.6292 12.4943 7.2136
Cold stimulation 31.0547 7.8995 4.5608
Scratched surface 28.1196 4.0169 2.3191
Ca2+, 200mM, 24h 23.3392 1.5225 0.879
Cu2+, 2mM, 6h 26.8611 4.7854 2.7629
Voriconazole 26.7064 6.5504 3.7819
Trichoderma interaction, early 30.4788 2.0641 1.1917
Trichoderma interaction 60h 32.1338 15.7254 9.079
Cobalt chloride 2mM repeat 40.0129 5.8231 3.362
Hypoxia 34.8408 0.9952 0.5746
Hypoxia control 33.0022 5.7083 3.2957
Protoplastation control 36.6818 0.3929 0.2778
Protoplastation 3.5h 39.3102 3.6256 2.5637
Protoplastation 1.5h 21.0791 3.4579 2.4451

General data

Systematic name -
Protein id CopciAB_446224.T0
Description Protein tyrosine kinase

Annotation summary

0 300 600 900 1200 1289

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd21037 MLKL_NTD - 216 346
Pfam PF07714 Protein tyrosine and serine/threonine kinase IPR001245 583 896

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
IPR008271 Serine/threonine-protein kinase, active site
IPR017441 Protein kinase, ATP binding site
IPR036537 Adaptor protein Cbl, N-terminal domain superfamily
IPR001245 Serine-threonine/tyrosine-protein kinase, catalytic domain

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0007166 cell surface receptor signaling pathway BP

KEGG

KEGG Orthology
K05126

EggNOG

COG category Description
T Protein tyrosine kinase

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_446224 across fungi.

Arrow shows the origin of gene family containing CopciAB_446224.

Protein

Sequence id CopciAB_446224.T0
Sequence >CopciAB_446224.T0
MTSPPSDTSALTPRLRTTSLPQSTSNSKSAVTPQAAPAATLSPSSESSSDDEFPDLEAFRSRGQAPSSQYHLPRK
QYPRSSPAIKIDGAGTDVRRAQSASASLASSLGSDLGFNIGRGRSLSPSSNPRSRDISPTPSAGLDASWWALPET
GAPPWKDQPKRKSSIPASEVDGYDRTKERVALAVRSCLGNVVDVGHELLSIGVDLLELAPVPGLAPAARTLLNIW
DAVDGVDVNFNRCLRLADRCARLLISIREEVREAGDAVGEELRDPIAALEEVFLHVLEFMRKQVRRPFLKRFLKR
DETQEDIDECNKRLDDATKLFTTSIVIRILRKTYEMDAQRQKDTRAIIKTIISSSIPQTDPPLSPILLSPEDNRP
TNDPSKEKPAPVTHFITTSNALGLSETIDISTIPPDNVIPLLNSLQESQNSLDRTNDIASLRQLMLKAIQASSDA
EMIDMLQVKHEQMPDAIKTLQRALETIEKRRNQAPLDTIPPGVIIGKVKRRYSLKSGDNQEGGLQRSKTVLSIES
TTSSKSTGGSSSAGGGSRRTRDTLEQEFIESGISALVRMSQGQNTNLPSWTITKFEINREKKIGVGGFSDVYRGT
WKGRTVAIKVLKMETEKKLFIREVEIWKTLHHPHVLELYGASSALEPPWFFVSPYQKHGSLVDYLKKVARDLQDP
ALTPTFRPDRSPRKTSTIPLPLRSNRATSPTPQRSPLSPLGPNSPKAPLREEFKIRPEWDLLRFMHEIAKGMEYL
HSRGVLHGDLKAANVLVDDSYRCVITDFGQSEMRSTAFRITGRQPTRGTLRWQAPEILMGKSELTREADVYAFAI
ACVEIINMGKLPWGSLLEDETIRNMVVKEDSRPEIAEDSRFNTPALQVILKACWNRDPDRRPPFFEVSKDLKRIR
QTFENGDVMDTPKGSLTPLPEEQPPSSPSPDMKPLPLPPVGSPVGTAINILWPEASGGGHREETVANGPIEFPVP
VFFKDLTPKPSVPISSVDDDVSDDIELVDLDYYPEVARVDATTAAVWNERRYRLLLTHDFHPSLVLPLWQPSAVS
LGAVGYLSKPRGEFITLFNALYPDNSKHPLAKSFPSIHGYGKVEHGSQTRDTRSLSQKGWDSIAGLLSRANKNDH
KEGDIPISRRFTYPLRAGHVSAHLCTQITKYVYLQDLKAAKRWFKANIDNIMHAYPTIQREDIYLVIGLLNTPNY
GLFVSHSHPDGHVHFNVHKASKIGQPWGTFTTDSTAHAARNQSGPCYDEADTRPRIEASKVSIHGGEWETVLISR
LRFRADEDEPTARV
Length 1289

Coding

Sequence id CopciAB_446224.T0
Sequence >CopciAB_446224.T0
ATGACATCCCCTCCCAGTGATACCTCTGCTCTGACCCCGCGATTGAGAACGACTTCACTACCCCAATCCACTTCC
AATAGCAAATCCGCAGTGACACCACAGGCAGCGCCCGCTGCGACGCTTTCACCGTCCTCAGAATCAAGCAGTGAC
GACGAGTTCCCGGACTTGGAGGCTTTCAGGAGCAGAGGACAAGCTCCATCTAGCCAATACCACCTCCCGCGCAAG
CAGTATCCGCGGTCGTCACCCGCTATCAAGATCGATGGGGCTGGCACCGACGTACGGAGGGCACAATCAGCATCT
GCATCTCTCGCTTCCAGTCTGGGGAGCGATCTAGGGTTCAACATTGGACGAGGCAGGTCCCTCTCGCCATCGTCG
AATCCTAGGTCACGAGATATCTCCCCTACCCCTTCTGCTGGCCTGGATGCTTCGTGGTGGGCTTTACCGGAGACG
GGGGCACCACCCTGGAAAGACCAACCGAAGCGAAAGAGTAGCATCCCAGCAAGTGAGGTAGATGGATACGACCGC
ACGAAAGAGCGTGTCGCTTTGGCTGTCCGGTCTTGTCTGGGAAACGTCGTGGACGTGGGGCACGAGCTACTTTCC
ATCGGAGTGGACCTTTTGGAATTGGCCCCAGTACCAGGGTTGGCTCCCGCAGCCAGAACATTGCTGAACATTTGG
GATGCTGTCGATGGAGTTGATGTCAACTTCAACCGGTGTCTTCGGTTGGCAGATCGATGTGCACGACTACTCATA
TCAATTCGCGAAGAAGTTCGGGAAGCAGGAGATGCTGTGGGAGAGGAATTGCGAGACCCGATAGCAGCCTTAGAA
GAGGTGTTCCTCCATGTACTGGAGTTCATGAGAAAACAGGTTCGAAGACCGTTTTTGAAGCGCTTCTTGAAGAGA
GATGAAACCCAGGAAGATATCGACGAGTGCAATAAGAGATTAGACGATGCTACGAAACTATTTACCACCTCGATC
GTGATTCGTATTCTGAGGAAAACCTATGAGATGGACGCTCAACGCCAGAAAGACACCCGAGCGATCATCAAGACC
ATCATTAGCTCCAGCATCCCCCAAACGGACCCTCCATTATCCCCCATCCTACTCTCTCCGGAGGATAACCGCCCT
ACAAACGACCCCTCAAAGGAGAAGCCAGCACCTGTCACCCATTTCATAACCACTTCCAATGCCCTCGGTCTTTCA
GAGACCATCGACATCTCGACTATCCCTCCGGACAACGTCATCCCTCTACTCAACAGTCTTCAAGAGAGCCAGAAC
TCCCTCGACCGCACAAACGACATTGCATCCCTTCGACAGCTCATGCTAAAGGCTATCCAAGCCAGCAGCGACGCG
GAAATGATCGACATGCTTCAGGTCAAGCACGAACAGATGCCTGATGCGATCAAAACTCTGCAAAGAGCGCTCGAG
ACGATAGAGAAGCGTCGCAACCAGGCGCCTCTCGATACAATCCCGCCGGGGGTAATCATTGGAAAGGTCAAGCGT
CGGTATAGTCTCAAGTCTGGCGACAACCAGGAAGGGGGGCTACAGCGATCTAAGACTGTTCTCAGCATCGAAAGC
ACCACCAGCTCGAAATCGACCGGAGGTTCGAGTAGTGCCGGCGGAGGATCAAGGAGAACAAGGGATACCTTGGAG
CAGGAGTTCATCGAGAGCGGAATCTCTGCTCTAGTGCGAATGAGCCAGGGTCAGAACACCAACCTTCCCAGCTGG
ACGATCACCAAGTTCGAAATCAATCGCGAGAAGAAGATTGGGGTTGGCGGCTTCTCGGATGTCTATCGAGGAACT
TGGAAAGGCCGCACCGTAGCGATCAAGGTCTTGAAGATGGAGACTGAGAAGAAGCTGTTTATACGGGAGGTCGAG
ATATGGAAGACGCTTCATCACCCCCATGTTCTCGAGCTGTACGGGGCTAGCAGTGCTCTTGAGCCGCCGTGGTTC
TTCGTCAGCCCGTATCAGAAACATGGCAGCTTGGTCGACTATCTCAAGAAGGTGGCGCGCGACCTTCAGGATCCT
GCCTTGACCCCAACCTTCCGCCCTGATCGCTCTCCCAGGAAGACGTCCACGATCCCTCTCCCACTGAGGTCCAAT
CGAGCAACCTCCCCTACGCCACAAAGATCACCGTTATCGCCCCTGGGACCCAATAGCCCCAAAGCTCCGCTTCGG
GAAGAGTTCAAGATTCGGCCAGAATGGGATCTTTTGCGGTTCATGCACGAAATCGCGAAAGGAATGGAGTACCTT
CATAGTCGAGGTGTTCTTCACGGTGATTTGAAGGCGGCGAACGTTCTCGTGGACGATTCCTATCGGTGTGTAATC
ACGGACTTCGGGCAGAGCGAGATGAGGTCGACCGCTTTCCGAATCACTGGGAGGCAGCCAACGCGCGGAACCCTT
CGATGGCAGGCTCCAGAAATCCTGATGGGAAAATCGGAACTGACAAGAGAAGCAGACGTGTACGCTTTTGCCATC
GCCTGTGTTGAAATCATCAATATGGGCAAGCTCCCTTGGGGAAGCTTGTTAGAAGACGAGACGATTCGAAACATG
GTCGTCAAAGAAGATAGTCGCCCTGAAATCGCTGAAGACTCTAGATTTAACACGCCCGCACTCCAAGTGATACTC
AAAGCTTGTTGGAACCGCGATCCGGACCGCCGCCCCCCTTTCTTTGAGGTGTCGAAGGATTTGAAGCGTATTCGT
CAGACGTTCGAAAATGGGGATGTTATGGATACTCCCAAGGGTTCTCTGACACCTTTACCAGAGGAACAACCCCCG
TCATCCCCATCGCCCGATATGAAGCCTTTGCCTCTCCCGCCGGTTGGCAGTCCGGTTGGAACTGCGATTAATATT
CTTTGGCCGGAGGCCTCGGGTGGCGGCCACAGGGAAGAGACGGTGGCGAATGGGCCCATCGAATTTCCAGTTCCG
GTATTCTTCAAAGACTTGACCCCGAAACCCTCGGTCCCAATTAGTAGTGTGGACGACGACGTCTCCGACGATATT
GAATTGGTGGACCTCGATTACTACCCAGAAGTCGCGCGTGTCGATGCCACAACCGCAGCCGTTTGGAACGAAAGA
AGGTATCGTTTGCTGTTAACGCACGATTTCCATCCTTCACTTGTCTTGCCACTGTGGCAACCTTCGGCCGTCTCC
CTCGGTGCAGTCGGGTACCTTAGCAAACCTCGCGGAGAATTTATCACTCTCTTCAACGCCTTGTACCCGGATAAC
TCTAAACACCCTCTGGCTAAGAGCTTCCCTTCCATCCACGGCTATGGCAAAGTCGAGCACGGCTCCCAAACTCGT
GATACGCGGTCGCTCTCTCAGAAGGGATGGGACTCCATAGCTGGGCTGCTGAGCCGTGCCAATAAGAACGATCAC
AAGGAGGGTGATATCCCAATTAGCCGCCGCTTCACGTATCCATTACGCGCCGGTCACGTCTCCGCTCACCTCTGC
ACCCAAATTACGAAATATGTCTATCTTCAAGATCTCAAGGCGGCGAAGAGGTGGTTCAAGGCGAACATCGATAAC
ATAATGCACGCCTACCCGACGATACAAAGAGAAGACATCTATCTCGTTATTGGTCTCCTCAACACCCCCAATTAC
GGGTTATTTGTCAGTCACAGTCATCCTGACGGTCATGTTCACTTTAACGTGCATAAAGCCAGTAAAATCGGTCAG
CCTTGGGGCACTTTTACCACAGATTCTACTGCCCATGCAGCTCGCAATCAATCAGGACCTTGTTACGACGAAGCT
GACACTCGTCCCCGAATCGAAGCAAGCAAAGTATCGATTCACGGAGGAGAGTGGGAAACCGTCTTGATTTCACGT
CTGCGGTTCAGAGCAGATGAAGATGAGCCAACGGCGAGAGTGTGA
Length 3870

Transcript

Sequence id CopciAB_446224.T0
Sequence >CopciAB_446224.T0
GGCGTTTTGCCACCCACCCACAACCTCGATTCATCGAGGACACCCAGCGGGGAGCTGGTTCTTTCCCTGGACCAG
CGCGAAGTACAACTCTATTCAATGACATCCCCTCCCAGTGATACCTCTGCTCTGACCCCGCGATTGAGAACGACT
TCACTACCCCAATCCACTTCCAATAGCAAATCCGCAGTGACACCACAGGCAGCGCCCGCTGCGACGCTTTCACCG
TCCTCAGAATCAAGCAGTGACGACGAGTTCCCGGACTTGGAGGCTTTCAGGAGCAGAGGACAAGCTCCATCTAGC
CAATACCACCTCCCGCGCAAGCAGTATCCGCGGTCGTCACCCGCTATCAAGATCGATGGGGCTGGCACCGACGTA
CGGAGGGCACAATCAGCATCTGCATCTCTCGCTTCCAGTCTGGGGAGCGATCTAGGGTTCAACATTGGACGAGGC
AGGTCCCTCTCGCCATCGTCGAATCCTAGGTCACGAGATATCTCCCCTACCCCTTCTGCTGGCCTGGATGCTTCG
TGGTGGGCTTTACCGGAGACGGGGGCACCACCCTGGAAAGACCAACCGAAGCGAAAGAGTAGCATCCCAGCAAGT
GAGGTAGATGGATACGACCGCACGAAAGAGCGTGTCGCTTTGGCTGTCCGGTCTTGTCTGGGAAACGTCGTGGAC
GTGGGGCACGAGCTACTTTCCATCGGAGTGGACCTTTTGGAATTGGCCCCAGTACCAGGGTTGGCTCCCGCAGCC
AGAACATTGCTGAACATTTGGGATGCTGTCGATGGAGTTGATGTCAACTTCAACCGGTGTCTTCGGTTGGCAGAT
CGATGTGCACGACTACTCATATCAATTCGCGAAGAAGTTCGGGAAGCAGGAGATGCTGTGGGAGAGGAATTGCGA
GACCCGATAGCAGCCTTAGAAGAGGTGTTCCTCCATGTACTGGAGTTCATGAGAAAACAGGTTCGAAGACCGTTT
TTGAAGCGCTTCTTGAAGAGAGATGAAACCCAGGAAGATATCGACGAGTGCAATAAGAGATTAGACGATGCTACG
AAACTATTTACCACCTCGATCGTGATTCGTATTCTGAGGAAAACCTATGAGATGGACGCTCAACGCCAGAAAGAC
ACCCGAGCGATCATCAAGACCATCATTAGCTCCAGCATCCCCCAAACGGACCCTCCATTATCCCCCATCCTACTC
TCTCCGGAGGATAACCGCCCTACAAACGACCCCTCAAAGGAGAAGCCAGCACCTGTCACCCATTTCATAACCACT
TCCAATGCCCTCGGTCTTTCAGAGACCATCGACATCTCGACTATCCCTCCGGACAACGTCATCCCTCTACTCAAC
AGTCTTCAAGAGAGCCAGAACTCCCTCGACCGCACAAACGACATTGCATCCCTTCGACAGCTCATGCTAAAGGCT
ATCCAAGCCAGCAGCGACGCGGAAATGATCGACATGCTTCAGGTCAAGCACGAACAGATGCCTGATGCGATCAAA
ACTCTGCAAAGAGCGCTCGAGACGATAGAGAAGCGTCGCAACCAGGCGCCTCTCGATACAATCCCGCCGGGGGTA
ATCATTGGAAAGGTCAAGCGTCGGTATAGTCTCAAGTCTGGCGACAACCAGGAAGGGGGGCTACAGCGATCTAAG
ACTGTTCTCAGCATCGAAAGCACCACCAGCTCGAAATCGACCGGAGGTTCGAGTAGTGCCGGCGGAGGATCAAGG
AGAACAAGGGATACCTTGGAGCAGGAGTTCATCGAGAGCGGAATCTCTGCTCTAGTGCGAATGAGCCAGGGTCAG
AACACCAACCTTCCCAGCTGGACGATCACCAAGTTCGAAATCAATCGCGAGAAGAAGATTGGGGTTGGCGGCTTC
TCGGATGTCTATCGAGGAACTTGGAAAGGCCGCACCGTAGCGATCAAGGTCTTGAAGATGGAGACTGAGAAGAAG
CTGTTTATACGGGAGGTCGAGATATGGAAGACGCTTCATCACCCCCATGTTCTCGAGCTGTACGGGGCTAGCAGT
GCTCTTGAGCCGCCGTGGTTCTTCGTCAGCCCGTATCAGAAACATGGCAGCTTGGTCGACTATCTCAAGAAGGTG
GCGCGCGACCTTCAGGATCCTGCCTTGACCCCAACCTTCCGCCCTGATCGCTCTCCCAGGAAGACGTCCACGATC
CCTCTCCCACTGAGGTCCAATCGAGCAACCTCCCCTACGCCACAAAGATCACCGTTATCGCCCCTGGGACCCAAT
AGCCCCAAAGCTCCGCTTCGGGAAGAGTTCAAGATTCGGCCAGAATGGGATCTTTTGCGGTTCATGCACGAAATC
GCGAAAGGAATGGAGTACCTTCATAGTCGAGGTGTTCTTCACGGTGATTTGAAGGCGGCGAACGTTCTCGTGGAC
GATTCCTATCGGTGTGTAATCACGGACTTCGGGCAGAGCGAGATGAGGTCGACCGCTTTCCGAATCACTGGGAGG
CAGCCAACGCGCGGAACCCTTCGATGGCAGGCTCCAGAAATCCTGATGGGAAAATCGGAACTGACAAGAGAAGCA
GACGTGTACGCTTTTGCCATCGCCTGTGTTGAAATCATCAATATGGGCAAGCTCCCTTGGGGAAGCTTGTTAGAA
GACGAGACGATTCGAAACATGGTCGTCAAAGAAGATAGTCGCCCTGAAATCGCTGAAGACTCTAGATTTAACACG
CCCGCACTCCAAGTGATACTCAAAGCTTGTTGGAACCGCGATCCGGACCGCCGCCCCCCTTTCTTTGAGGTGTCG
AAGGATTTGAAGCGTATTCGTCAGACGTTCGAAAATGGGGATGTTATGGATACTCCCAAGGGTTCTCTGACACCT
TTACCAGAGGAACAACCCCCGTCATCCCCATCGCCCGATATGAAGCCTTTGCCTCTCCCGCCGGTTGGCAGTCCG
GTTGGAACTGCGATTAATATTCTTTGGCCGGAGGCCTCGGGTGGCGGCCACAGGGAAGAGACGGTGGCGAATGGG
CCCATCGAATTTCCAGTTCCGGTATTCTTCAAAGACTTGACCCCGAAACCCTCGGTCCCAATTAGTAGTGTGGAC
GACGACGTCTCCGACGATATTGAATTGGTGGACCTCGATTACTACCCAGAAGTCGCGCGTGTCGATGCCACAACC
GCAGCCGTTTGGAACGAAAGAAGGTATCGTTTGCTGTTAACGCACGATTTCCATCCTTCACTTGTCTTGCCACTG
TGGCAACCTTCGGCCGTCTCCCTCGGTGCAGTCGGGTACCTTAGCAAACCTCGCGGAGAATTTATCACTCTCTTC
AACGCCTTGTACCCGGATAACTCTAAACACCCTCTGGCTAAGAGCTTCCCTTCCATCCACGGCTATGGCAAAGTC
GAGCACGGCTCCCAAACTCGTGATACGCGGTCGCTCTCTCAGAAGGGATGGGACTCCATAGCTGGGCTGCTGAGC
CGTGCCAATAAGAACGATCACAAGGAGGGTGATATCCCAATTAGCCGCCGCTTCACGTATCCATTACGCGCCGGT
CACGTCTCCGCTCACCTCTGCACCCAAATTACGAAATATGTCTATCTTCAAGATCTCAAGGCGGCGAAGAGGTGG
TTCAAGGCGAACATCGATAACATAATGCACGCCTACCCGACGATACAAAGAGAAGACATCTATCTCGTTATTGGT
CTCCTCAACACCCCCAATTACGGGTTATTTGTCAGTCACAGTCATCCTGACGGTCATGTTCACTTTAACGTGCAT
AAAGCCAGTAAAATCGGTCAGCCTTGGGGCACTTTTACCACAGATTCTACTGCCCATGCAGCTCGCAATCAATCA
GGACCTTGTTACGACGAAGCTGACACTCGTCCCCGAATCGAAGCAAGCAAAGTATCGATTCACGGAGGAGAGTGG
GAAACCGTCTTGATTTCACGTCTGCGGTTCAGAGCAGATGAAGATGAGCCAACGGCGAGAGTGTGAGCCATTGTA
AAACCACATTGTACTACTAATCATTGTTATCATGCCAACATCTGTACTTACGACGAGACGAACTCGGACATTGTC
GCCCATGTATAAGACATACCTGCAGTATATTTATGGATTTAGCATTAC
Length 4098

Gene

Sequence id CopciAB_446224.T0
Sequence >CopciAB_446224.T0
GGCGTTTTGCCACCCACCCACAACCTCGATTCATCGAGGACACCCAGCGGGGAGCTGGTTCTTTCCCTGGACCAG
CGCGAAGTACAACTCTATTCAATGACATCCCCTCCCAGTGATACCTCTGCTCTGACCCCGCGATTGAGAACGACT
TCACTACCCCAATCCACTTCCAATAGCAAATCCGCAGTGACACCACAGGCAGCGCCCGCTGCGACGCTTTCACCG
TCCTCAGAATCAAGCAGTGACGACGAGTTCCCGGACTTGGAGGCTTTCAGGAGCAGAGGACAAGCTCCATCTAGC
CAATACCACCTCCCGCGCAAGCAGTATCCGCGGTCGTCACCCGCTATCAAGATCGATGGGGCTGGCACCGACGTA
CGGAGGGCACAATCAGCATCTGCATCTCTCGCTTCCAGTCTGGGGAGCGATCTAGGGTTCAACATTGGACGAGGC
AGGTCCCTCTCGCCATCGTCGAATCCTAGGTCACGAGATATCTCCCCTACCCCTTCTGCTGGCCTGGATGCTTCG
TGGTGGGCTTTACCGGAGACGGGGGCACCACCCTGGAAAGACCAACCGAAGCGAAAGAGTAGCATCCCAGCAAGT
GAGGTAGATGGATACGACCGCACGAAAGAGGTGAGCTTCGCTCTTCGAACCACACAGTGCCGTCTCCTTTAGGGT
GCATCAGTGATCGGTTGACTGACTTTGCATCCCTTCTTTCTGGACAGCGTGTCGCTTTGGCTGTCCGGTCTTGTC
TGGGAAACGTCGTGGACGTGGGGCACGAGCTACTTTCCATCGGAGTGGACCTTTTGGAATTGGCCCCAGTACCAG
GGTTGGCTCCCGCAGCCAGAACATTGCTGAACATTTGGGATGCTGTCGATGGAGTTGATGTGCGTGTTCCGGTTT
ACTCGAGGAGCTAAAACCGACTTAAAGAGACTTCCTTCTAGGTCAACTTCAACCGGTGTCTTCGGTTGGCAGATC
GATGTGCACGACTACTCATATCAATTCGCGAAGAAGTTCGGGAAGCAGGAGATGCTGTGGGAGAGGAATTGCGAG
ACCCGATAGCAGCCTTAGAAGAGTGAGTCTTGTGATGGTTCTGACATTGGCTGATAACCCACATGGTCAATAGGG
TGTTCCTCCATGTACTGGAGTTCATGAGAAAACAGGTTCGAAGACCGTTTTTGAAGCGCTTCTTGAAGAGAGATG
AAACCCAGGAAGATATCGACGAGTGCAATAAGAGATTAGACGATGCTACGAAACTATTTACCGTGAGTTGACCGA
ACCTTTCCCATCACTGTTGTCTGACAGCATGCCAGACCTCGATCGTGATTCGTATTCTGAGGAAAACCTATGAGA
TGGACGCTCAACGCCAGAAAGACACCCGAGCGATCATCAAGACCATCATTAGCTCCAGCATCCCCCAAACGGACC
CTCCATTATCCCCCATCCTACTCTCTCCGGAGGATAACCGCCCTACAAACGACCCCTCAAAGGAGAAGCCAGCAC
CTGTCACCCATTTCATAACCACTTCCAATGCCCTCGGTCTTTCAGAGACCATCGACATCTCGACTATCCCTCCGG
ACAACGTCATCCCTCTACTCAACAGTCTTCAAGAGAGCCAGAACTCCCTCGACCGCACAAACGACATTGCATCCC
TTCGACAGCTCATGCTAAAGGCTATCCAAGCCAGCAGCGACGCGGAAATGATCGACATGCTTCAGGTCAAGCACG
AACAGATGCCTGATGCGATCAAAACTCTGCAAAGAGCGCTCGAGACGATAGAGAAGCGTCGCAACCAGGCGCCTC
TCGATACAATCCCGCCGGGGGTAATCATTGGAAAGGTCAAGCGTCGGTATAGTCTCAAGTCTGGCGACAACCAGG
AAGGGGGGCTACAGCGATCTAAGACTGTTCTCAGCATCGAAAGCACCACCAGCTCGAAATCGACCGGAGGTTCGA
GTAGTGCCGGCGGAGGATCAAGGAGAACAAGGGATACCTTGGAGCAGGAGTTCATCGAGAGCGGAATCTCTGCTC
TAGTGCGAATGAGCCAGGGTCAGAACACCAACCTTCCCAGCTGGACGATCACCAAGTTCGAAATCAATCGCGAGA
AGAAGATTGGGGTTGGCGGCTTCTCGGATGTCTATCGAGGAACTTGGAAAGGCCGCACCGTAGCGATCAAGGTCT
TGAAGATGGAGACTGAGAAGAAGCTGTTTATACGGGAGGTCGAGATATGGAAGACGCTTCATCACCCCCATGTTC
TCGAGCTGTACGGGGCTAGCAGTGCTCTTGAGCCGCCGTGGTTCTTCGTCAGCCCGTATCAGAAACATGGCAGCT
TGGTCGACTATCTCAAGAAGGTGGCGCGCGACCTTCAGGATCCTGCCTTGACCCCAACCTTCCGCCCTGATCGCT
CTCCCAGGAAGACGTCCACGATCCCTCTCCCACTGAGGTCCAATCGAGCAACCTCCCCTACGCCACAAAGATCAC
CGTTATCGCCCCTGGGACCCAATAGCCCCAAAGCTCCGCTTCGGGAAGAGTTCAAGATTCGGCCAGAATGGGATC
TTTTGCGGTTCATGCACGAAATCGCGAAAGGAATGGAGTACCTTCATAGTCGAGGTGTTCTTCACGGTGATTTGA
AGGCGGCGAACGTTCTCGTGGACGATTCCTATCGGTGTGTAATCACGGACTTCGGGCAGAGCGAGATGAGGTCGA
CCGCTTTCCGAATCACTGGGAGGCAGCCAACGCGTACGTCCTTCTGACTATCCTGGTCCCCGCTACGAGCTGACA
CTCCTCTAGGCGGAACCCTTCGATGGCAGGCTCCAGAAATCCTGATGGGAAAATCGGAACTGACAAGAGAAGCAG
ACGTGTACGCTTTTGCCATCGCCTGTGTTGAAATCATCAATATGGGCAAGCTCCCTTGGGGAAGCTTGTTAGAAG
ACGAGACGATTCGAAACATGGTCGTCAGTACGTTCTTCCATGTTCGCTGAAATGACTCTATTGGAGACTAACCCC
CTCCTCCTCCACAGAAGAAGATAGTCGCCCTGAAATCGCTGAAGACTCTAGATTTAACACGCCCGCACTCCAAGT
GATACTCAAAGCTTGTTGGAACCGCGATCCGGACCGCCGCCCCCCTTTCTTTGAGGTGTCGAAGGATTTGAAGCG
TATTCGTCAGACGTTCGAAAATGGGGATGTTATGGATACTCCCAAGGGTTCTCTGACACCTTTACCAGAGGAACA
ACCCCCGTCATCCCCATCGCCCGATATGAAGCCTTTGCCTCTCCCGCCGGTTGGCAGTCCGGTTGGAACTGCGAG
TACGTCTTAATTCTTGTTTCTTGAGCATCTCTTCGACTGTCTGACCATGTCACATCAGTTAATATTCTTTGGCCG
GAGGCCTCGGGTACGTTTGATTGGCACTTTATGAAATGCTGGCTGACGTCGGGGTTCTGCCCTCAGGTGGCGGCC
ACAGGGAAGAGACGGTGGCGAATGGGCCCATCGAATTTCCAGTTCCGGTATTCTTCAAAGACTTGACCCCGAAAC
CCTCGGTCCCAATTAGTAGTGTGGACGACGACGTCTCCGACGATATTGAATTGGTGGACCTCGATTACTACCCAG
AAGTCGCGCGTGTCGATGCCACAACCGCAGCCGTTTGGAACGAAAGAAGGTATCGTTTGCTGTTAACGCACGATT
TCCATCCTTCACGTAGGTCCTTCCGAGAGTTATTTTAGTTATTCACTCACGTTGCTTCCAGTTGTCTTGCCACTG
TGGCAACCTTCGGCCGTCTCCCTCGGTGCAGTCGGGTACCTTAGCAAACCTCGCGGAGAATTTATCACTCTCTTC
AACGCCTTGTACCCGGATAACTCTAAACACCCTCTGGCTAAGAGCTTCCCTTCCATCCACGGCTATGGCAAAGTC
GAGCACGGCTCCCAAACTCGTGATACGCGGTCGCTCTCTCAGAAGGGATGGGACTCCATAGCTGGGCTGCTGAGC
CGTGCCAATAAGAACGATCACAAGGAGGGTGATATCCCGTAAGCACTCCCCCGATGCAAACAGTTTTGATTTTGA
CTGCTGATCACCGTCTAACAGAATTAGCCGCCGCTTCACGTATCCATTACGCGCCGGTCACGTCTCCGCTCACCT
CTGCACCCAAATTACGAAATATGTCTATCTTCAAGATCTCAAGGCGGCGAAGAGGTGGTTCAAGGCGAACATCGA
TAACATAATGCACGCCTACCCGACGATACAAAGAGAAGACATCTATCTCGGTAAGATCTTGGCCGTACCCCCTCA
ATGTCACGGAAGGCTGACAGTGGTTATAGTTATTGGTCTCCTCAACACCCCCAATTACGGGTTATTTGTCAGTCA
CAGTCATCCTGACGGTCATGTACGTGAACACCGCTTCAGACACTGACACCCCGAGGAGCTAACTCGCGAACTTAG
GTTCACTTTAACGTGCATAAAGCCAGTAAAATCGGTCAGCCTTGGGGCACTTTTACCACAGATTCTACTGCCCAT
GCAGCTCGCAATCAATCAGGACCTTGTTACGACGAAGCTGACACTCGTCCCCGAATCGAAGCAAGCAAAGTATCG
ATTCACGGAGGAGAGTGGGAAACCGTCTTGATTTCACGTCTGCGGTTCAGAGCAGATGAAGATGAGCCAACGGCG
AGAGTGTGAGCCATTGTAAAACCACATTGTACTACTAATCATTGTTATCATGCCAACATCTGTACTTACGACGAG
ACGAACTCGGACATTGTCGCCCATGTATAAGACATACCTGCAGTATATTTATGGATTTAGCATTAC
Length 4791