CopciAB_464890
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_464890 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 464890
Uniprot id Functional description Agc agc-unique protein kinase
Location scaffold_1:818819..823916 Strand +
Gene length (nt) 5098 Transcript length (nt) 4711
CDS length (nt) 3948 Protein length (aa) 1315

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Pleurotus ostreatus PC9 PleosPC9_1_116025 56.7 0 1342
Pleurotus ostreatus PC15 PleosPC15_2_1063313 56.6 0 1339
Pleurotus eryngii ATCC 90797 Pleery1_1457021 55.6 0 1332
Hypsizygus marmoreus strain 51987-8 Hypma_RDB29452 56.4 0 1300
Lentinula edodes W1-26 v1.0 Lentinedodes1_7299 53.7 0 1259
Lentinula edodes NBRC 111202 Lenedo1_1047471 53.6 0 1242
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_104237 50.8 0 1207
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_113649 50.4 0 1206
Flammulina velutipes Flave_chr07AA01038 52.5 0 1189
Schizophyllum commune H4-8 Schco3_2644731 51.9 0 1188
Ganoderma sp. 10597 SS1 v1.0 Gansp1_125581 52.6 0 1169
Grifola frondosa Grifr_OBZ68429 52.2 0 1133
Auricularia subglabra Aurde3_1_1313702 48.1 0 1063
Agrocybe aegerita Agrae_CAA7264913 63.3 0 1034
Lentinula edodes B17 Lened_B_1_1_10979 54.7 8.003E-199 657

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 221.0203 4.9589 2.863
oidia 183.3878 10.6562 6.1523
vegetative_mycelium 192.1132 25.6498 14.8089
primordia 163.5979 15.68 9.0529
hyphal_knot 182.0476 15.4131 8.8987
young_fruiting_body 106.7572 6.1409 3.5454
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 164.174 16.1011 9.296
Wheat bran 96.3588 30.3955 17.5489
Horse manure 151.4325 46.0069 26.5621
Oak leaves 235.5199 24.1675 13.9531
Hay 140.4825 20.4243 11.792
Corn stalk 177.47 9.5429 5.5096
Pectine 185.3827 4.3491 2.5109
Microcrystalline cellulose 181.3075 29.3619 16.9521
Xylose 160.6137 11.6406 6.7207
Cellobiose 124.5202 16.2192 9.3642
Lignin 167.3815 23.1181 13.3473
Apple peels 185.2539 18.5426 10.7056
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 146.679 6.9163 3.9931
Bsubtilis 173.0808 8.0934 4.6727
Ecoli 145.3916 7.3912 4.2673
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 16.9462 2.068 1.1939
BS 4h 35.5471 6.9424 4.0082
BS 8h 53.6862 13.3056 7.682
BS 12h 44.6865 12.0113 6.9347
Oidia 0 h 60.479 46.1619 26.6516
Oidia 18 h 89.7271 20.9977 12.123
Sclerotia 63.3139 18.9331 10.931
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 45.7567 9.1828 5.3017
DM 36h 79.7865 28.1879 16.2743
DM 60h 81.3281 10.9269 6.3087
DM 84h 78.7419 14.1996 8.1981
DM 108h 80.2838 7.2956 4.2121
DM 132h 76.2899 4.4427 2.565
DM 156hAE 91.0883 19.3024 11.1442
ELI1hAE 123.6579 36.0875 20.8352
ELI2hAE 110.7214 17.2418 9.9545
LI2hAE 110.1746 14.0368 8.1042
LI6hAE 146.6299 11.7086 6.76
LI12hAE 83.6471 17.3345 10.0081
LI18hAE 69.111 17.7584 10.2528
LI 24hAE 72.9381 23.6172 13.6354
DM 156hAM 56.1242 8.7152 5.0317
ELI1hAM 62.9755 29.9967 17.3186
ELI2hAM 76.7546 11.7517 6.7849
LI2hAM 79.9283 17.1919 9.9257
LI6hAM 105.0313 14.7588 8.521
LI12hAM 82.1043 22.4893 12.9842
LI18hAM 90.1786 19.1095 11.0328
LI 24hAM 53.5502 4.4503 2.5694
LI 24hHK 40.9273 10.6453 6.146
L/D 6h 62.8296 3.7892 2.1877
L/D 12h 68.2973 19.7945 11.4284
L/D 18h 103.2463 11.8625 6.8488
L/D 24h 110.4362 2.068 1.194
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 72.0609 8.8126 5.0879
Hyphal knots 188.0808 44.8403 25.8885
Primordium 1 178.2402 19.6098 11.3217
Primordium 2 142.2758 26.5793 15.3456
Young Fruiting body cap 200.4049 42.771 24.6938
Younf fruiting body gill 94.8201 8.2985 4.7911
Young fruiting body stipe 235.9834 64.6532 37.3276
Mature fruiting body cap_gill 595.9134 99.7341 57.5815
Mature fruiting body stipe 1136.857 170.4506 98.4097
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 227.1307 11.5845 6.6883
NH4NO3 227.8225 7.7869 4.4958
Proline 241.3555 23.9038 13.8009
Tryptophan 185.744 15.7796 9.1104
Isoleucin 234.3828 22.3119 12.8818
Arginine 303.6363 7.0198 4.0529
Metionine 243.6693 5.8777 3.3935
NaNO3 227.2485 9.7409 5.6239
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 227.1307 11.5845 6.6883
Citrus peel 162.262 19.0903 11.0218
Poplar leaves 216.5375 29.5747 17.0749
Typha leaves 219.0298 11.599 6.6967
Overwintered Salix leaves 217.4302 16.1278 9.3114
Reed flowering 204.5453 37.9356 21.9021
Tigernut 200.9123 13.8251 7.9819
Energy cane 219.7456 14.7912 8.5397
Guar gum 202.9007 12.1846 7.0348
Apple peels 219.9853 41.2053 23.7899
Cellobiose 283.3517 14.1381 8.1626
Corn stalk 199.2003 20.9564 12.0992
Horse manure 170.6053 21.1948 12.2368
Lignin 202.1421 52.6298 30.3858
Microcrystalline cellulose 211.6049 32.476 18.75
Oak leaves 179.7439 32.9306 19.0125
Pectin esterified 131.2896 17.637 10.1827
Poplar sawdust 157.3113 36.8884 21.2975
Wheat bran 122.9733 20.7891 12.0026
Chlamydomonas reinhardtii 223.8357 27.5433 15.9021
Vertatryl alcohol 135.9382 16.115 9.304
Furfural 150.8351 14.9778 8.6474
Autoclaved mycelium 218.4429 12.0351 6.9484
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 119.4478 13.0072 7.5097
Ribose 175.4872 18.9125 10.9191
Mannose 159.8123 1.4382 1.017
Fructose 148.8409 11.5363 6.6605
Arabinose 178.4656 3.7449 2.1621
Xylose 184.4631 15.506 8.9524
Galacturonic acid 157.4146 26.0158 15.0202
Rhamnogalacturonan 150.674 5.0702 2.9273
Pectin esterified 159.2249 6.8221 3.9387
Polygalacturonic acid 148.558 19.0467 10.9966
Sodium acetate 188.7359 6.5847 3.8017
No nitrogen 159.0801 17.2547 9.962
BSA 173.9498 3.6936 2.1325
Glutamine 160.7088 18.1832 10.4981
No phosphate 147.9343 14.5121 8.3785
No carbon 194.3434 8.7581 6.1929
No sulphur 167.9501 18.0576 10.4255
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 227.1307 11.5845 6.6883
Amylose 177.5155 4.1279 2.3832
Fucose 186.1316 9.3939 5.4236
Galactose 183.4761 11.126 6.4236
Lactose 212.7321 16.6849 9.633
Maltose 199.7536 34.1329 19.7066
Mannitol 235.4087 48.3829 27.9339
Rhamnose 234.6677 33.2527 19.1984
Sorbitol 181.7541 21.0788 12.1698
Trehalose 234.6322 16.302 9.412
Glycerol 226.4526 25.2161 14.5585
Glucuronic acid 195.5907 25.4276 14.6807
Arabinan 158.7509 2.2173 1.2802
Galactan 229.9581 33.0769 19.097
Galactomannan 183.8222 12.4718 7.2006
Glucan 211.87 13.7617 7.9453
Xylan 183.7263 12.4324 7.1778
Xyloglucan 212.4069 11.6133 6.7049
Arabinogalactan 192.5022 9.6193 5.5537
Pectin 129.7908 47.2658 27.2889
Rhamnogalacturonan 125.5192 30.1483 17.4062
Polygalacturonic acid 204.3877 17.7411 10.2428
Mannan 192.0216 18.2416 10.5318
Amylopectin 173.9147 32.0512 18.5048
Inulin 261.7325 11.1903 6.4607
BSA 223.4871 24.5942 14.1995
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 81.3281 10.9269 6.3087
2h WAT 95.2172 9.6088 5.5477
4h WAT 87.4108 15.518 8.9593
8h WAT 84.3368 21.0098 12.13
16h WAT 94.2093 6.8945 3.9805
24h WAT 89.2025 14.5591 8.4057
WAT hyphal knot -30h 85.095 5.9536 3.4373
WAT hyphal knot -22h 127.92 14.1718 8.1821
WAT hyphal knot -15h 118.1547 31.5152 18.1953
WAT hyphal knot -7.5h 78.1379 43.8684 25.3274
WAT hyphal knot 102.608 38.2846 22.1036
WAT hyphal knot +7.5h 105.4955 39.3795 22.7358
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 201.8181 69.907 40.3608
Straw 3h 168.1776 6.6481 3.8383
Straw 6h 131.7272 34.2484 19.7733
Straw 12h 201.2429 18.1283 10.4664
Straw 24h 181.5282 41.1516 23.7589
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 109.1376 23.374 13.495
Frost (-20C, 30min) 46.5963 7.3418 4.2388
Heat shock (47C, 2h) 74.7814 6.6009 3.8111
High CO2 81.537 4.7014 2.7144
Drought (4% agar, 12h) 49.4084 3.0747 1.7752
Oxidative (1mM H2O2, 3h) 82.6743 16.0636 9.2743
Acidic (pH4, 3h) 105.3957 11.7195 6.7663
Alkaline (pH9, 3h) 83.1018 3.0552 1.7639
Osmotic (sorbitol 2h) 118.2451 8.7571 5.0559
CongoRed (3h) 97.5351 17.1761 9.9166
Cobalt chloride control 72.3089 9.9945 5.7703
Cobalt chloride 2mM 102.7187 15.5422 8.9733
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 91.0156 29.5467 17.0588
Cold stimulation 67.5485 19.6836 11.3643
Scratched surface 69.7641 5.7455 3.3172
Ca2+, 200mM, 24h 77.5081 12.9773 7.4925
Cu2+, 2mM, 6h 96.3208 13.4035 7.7385
Voriconazole 83.0347 5.339 3.0825
Trichoderma interaction, early 78.6086 22.3346 12.8949
Trichoderma interaction 60h 145.3832 97.9544 56.554
Cobalt chloride 2mM repeat 132.6263 27.8736 16.0928
Hypoxia 76.4046 16.9546 9.7888
Hypoxia control 71.54 18.2597 10.5422
Protoplastation control 68.3467 14.4378 10.2091
Protoplastation 3.5h 124.3464 35.4822 25.0897
Protoplastation 1.5h 130.3137 17.5317 12.3968

General data

Systematic name -
Protein id CopciAB_464890.T0
Description Agc agc-unique protein kinase

Annotation summary

0 300 600 900 1200 1315

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
CDD cd05123 STKc_AGC IPR045270 451 758
Pfam PF00069 Protein kinase domain IPR000719 446 758

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR008271 Serine/threonine-protein kinase, active site
IPR045270 Serine/Threonine Kinase AGC, catalytic domain
IPR000961 AGC-kinase, C-terminal
IPR011009 Protein kinase-like domain superfamily

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0004674 protein serine/threonine kinase activity MF

KEGG

KEGG Orthology
K13303

EggNOG

COG category Description
T Agc agc-unique protein kinase

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_464890 across fungi.

Arrow shows the origin of gene family containing CopciAB_464890.

Protein

Sequence id CopciAB_464890.T0
Sequence >CopciAB_464890.T0
MQVVDTNIPANRRQPVRLDGQDGPWSVSVAETPHDSRSYSLYIKTPTHNLTLTRTAIEILELDRKLRDSHPASKI
PVLPIDAASLPIPPKRKSNFLNTLSRLASPTSNKNAKSAARRGENATTATAVVASTLPTPPLTSPASESNDPFTQ
VENPSEPSPSAASPSATSTAIAAYLTTISNAPELRKDRVWKRFVRVRTDDLESVRVERAIKRVRSDLAAHVGGLA
NNRASLIGSVHAEHDKENADRAEASLPTPEDDAGDSAAPSGGNQGGAGQDQKEGDDAPEAHAREATATPADAQAV
NPAGASDAAPVQGDQATSSDDQKHLVDGEGRPATGTDESTAAAQGHTADVDQTQAAAPSSSSAATSSTSAAAAAS
RLHRSQSCEPDKSHKMARAYAQSTTPSQDGLDGGMSSQIETGDESSFSAAVTRKRKKKKKSSKKVTIEDFEMIRV
LGKGCAGKVLLVRHKTGSGLFALKAITKRHVLAHQELQHTLTEQAVLKRMAAESKDPFVVKLWWSFHDKENLFLV
MDFHPGGDLATQLARWGRLSRDRTRFYAAEIVEGVEGLHAAGVIYRDLKPENILIAADGHIVLTDFGLSKEFSRP
HLSAASSAPMTPSGSRSSDFYSSAPGTPHSVMPPWMKPDKNGEMMYGWPGQPIGNPDVTTTFCGTAEYLAPEVIQ
GLPYSYEVDWWSFGTMLYEMLTGMTPFYANNHSDMYVRVLQDELTFPDERVMDQDTKSLIRGLLQKNPDLRIREP
RIKKHPYFSMIDWCHVYYKRYIPPYVPPVDRTVAYDTQNFDETFLDMEPVLDEYVDETGQATDTDAEPQTDTDRT
DGDTNTTPSQSRSSSVRPASRTANEEEDDSVDVFDGYSFKGRHSILMDDDDEDGDEVDSEEGEDDESMDQDGSSS
MMTGETKSEGDTIDEDEVRQQQREEDGATSELEPKTPEARPSALPPVDDAVSPKPAQPQPPQQSPPPPTPPAKTR
EPSKVHEPVVPKDSLPSASEEELLANASVAVELEEQLEYQAKEEEAYKRATIIADPNGRPVNGRHTPPPKASGSR
AQGRTKRREKSGVPALDKYLSDGGDDEPEMTEPERDEEDEDWDFVEAGDGEDRNGAKGTSLWARGVVDRYKLAVF
RKGSTPGQQRSVSGMSKSSQVSEGGTGAESPSPSSRRGRGTGLNFRKHPRQFLRPKAPPSSYTNSTRSFSATASS
SLSAAASKSMSTPTGSGLLTPVNTSMFSPSLKSKESAVSMDAKSMSSDYSGNVISPTTPSATNGGPELGSPPAEG
EQVEKPLKNKKLKKYKNNAEKVFSLFSSNSPKPPPASAAS
Length 1315

Coding

Sequence id CopciAB_464890.T0
Sequence >CopciAB_464890.T0
ATGCAAGTTGTAGATACCAACATACCCGCCAACCGCAGGCAACCAGTCCGTCTAGATGGCCAAGATGGCCCCTGG
AGCGTCAGCGTCGCAGAAACACCCCACGATTCCCGCTCCTACAGTCTTTACATAAAGACGCCGACGCACAACCTC
ACGCTCACTCGCACTGCCATCGAGATTCTTGAGCTGGACCGAAAACTCCGCGACTCCCATCCTGCCTCCAAGATC
CCAGTCCTCCCCATCGACGCCGCATCGCTCCCCATCCCTCCCAAACGCAAGTCAAACTTTTTGAACACTCTTTCT
CGTCTTGCGTCCCCGACTTCGAACAAGAATGCCAAATCGGCAGCTCGTCGAGGTGAAAACGCGACGACGGCGACT
GCGGTTGTCGCGTCCACACTCCCCACCCCGCCTCTCACCAGCCCCGCAAGCGAGAGCAACGATCCCTTCACTCAG
GTCGAGAACCCCAGCGAGCCAAGCCCATCAGCTGCCTCCCCCTCGGCTACCAGCACCGCGATCGCAGCCTATCTC
ACCACCATCTCCAACGCTCCAGAGTTGCGCAAGGATCGTGTGTGGAAGCGTTTTGTTCGGGTCCGGACGGATGAT
CTAGAGAGTGTCCGTGTTGAAAGGGCCATTAAACGTGTTCGCTCTGATCTAGCGGCACATGTCGGTGGTCTTGCC
AATAACCGTGCTAGTCTCATTGGGAGTGTGCACGCCGAGCATGACAAAGAAAACGCTGATCGAGCAGAGGCTTCG
CTGCCCACTCCTGAGGATGACGCTGGGGATTCAGCTGCGCCATCCGGAGGCAATCAGGGTGGTGCTGGGCAAGAC
CAGAAGGAGGGGGACGATGCTCCAGAAGCCCATGCCCGAGAGGCTACTGCTACTCCTGCTGATGCTCAGGCGGTC
AACCCTGCAGGAGCGTCAGATGCCGCGCCCGTTCAGGGTGATCAGGCGACCTCGTCTGATGATCAAAAGCACCTT
GTCGATGGAGAGGGCCGACCCGCCACCGGAACAGATGAATCTACCGCTGCTGCACAAGGGCACACTGCCGATGTC
GACCAAACTCAAGCTGCTGCTCCTTCCTCTTCGTCTGCTGCGACATCCTCCACTTCTGCAGCTGCTGCGGCTTCC
CGTCTCCACCGTTCCCAGTCGTGCGAGCCTGACAAGTCTCACAAGATGGCTAGGGCCTACGCACAGTCCACGACC
CCGAGCCAGGACGGCCTCGATGGTGGGATGTCATCACAGATCGAGACCGGCGACGAATCGTCCTTCTCCGCAGCC
GTCACCCGCAAACGCAAGAAGAAGAAGAAGTCGTCAAAGAAAGTTACCATTGAAGACTTTGAGATGATTCGTGTG
CTTGGGAAGGGTTGTGCTGGTAAAGTGTTGCTTGTTCGACACAAGACTGGCTCGGGCCTGTTCGCTCTCAAGGCT
ATCACGAAACGACACGTTTTGGCGCATCAAGAGCTGCAGCATACGTTGACGGAACAGGCTGTTCTAAAACGGATG
GCCGCGGAGTCGAAAGATCCCTTTGTCGTCAAGCTGTGGTGGAGTTTCCATGATAAAGAGAACCTCTTCTTGGTT
ATGGACTTCCACCCCGGAGGTGATCTTGCGACCCAACTGGCTCGTTGGGGTCGACTCAGCAGGGACCGAACCCGT
TTCTACGCCGCTGAAATCGTCGAAGGTGTCGAAGGCCTCCACGCCGCCGGTGTCATCTACCGCGACCTCAAGCCC
GAAAATATCCTCATCGCCGCGGACGGGCACATCGTTCTCACCGATTTCGGTCTCTCCAAGGAGTTCTCCCGTCCC
CACTTGTCCGCCGCTTCTTCTGCTCCGATGACTCCTAGTGGAAGTCGTTCGAGCGATTTCTATTCGAGTGCGCCC
GGGACCCCACATAGTGTGATGCCTCCGTGGATGAAGCCTGATAAGAATGGCGAAATGATGTACGGGTGGCCAGGT
CAGCCGATTGGGAATCCGGATGTGACCACTACGTTCTGTGGGACGGCCGAGTACCTTGCGCCTGAGGTTATCCAA
GGCTTGCCGTATTCGTACGAGGTGGATTGGTGGAGTTTTGGAACCATGTTGTATGAGATGTTGACTGGCATGACT
CCATTCTATGCCAACAACCATTCCGACATGTATGTGAGGGTGTTGCAGGACGAGTTGACATTCCCGGATGAGAGG
GTTATGGATCAGGATACCAAGAGCTTGATTCGTGGTCTCTTGCAAAAGAATCCCGACCTCCGAATTCGTGAACCT
AGGATCAAGAAACACCCCTATTTCTCCATGATCGACTGGTGTCACGTCTACTACAAGCGGTACATTCCTCCATAT
GTCCCTCCTGTCGACCGCACGGTTGCATACGACACCCAAAACTTCGATGAAACCTTCCTCGACATGGAACCTGTT
TTGGACGAATACGTCGACGAGACTGGCCAAGCCACCGACACTGATGCCGAGCCTCAGACCGATACCGACCGGACT
GACGGTGATACCAACACCACGCCTTCTCAATCGCGCAGTTCTTCCGTCCGTCCTGCTTCTCGAACGGCAAACGAG
GAAGAAGACGACAGTGTGGACGTGTTCGATGGGTACTCGTTCAAGGGTCGACACTCGATACTTATGGACGATGAC
GACGAGGACGGTGACGAGGTGGACAGTGAAGAGGGTGAGGATGACGAGAGTATGGACCAGGATGGCAGCTCTTCG
ATGATGACCGGGGAGACCAAGTCAGAGGGCGATACGATTGATGAGGATGAGGTTCGTCAGCAACAACGTGAGGAG
GATGGTGCTACTTCAGAGTTGGAGCCCAAGACGCCTGAAGCAAGGCCTTCGGCTTTGCCTCCTGTCGACGACGCT
GTATCACCAAAACCAGCGCAGCCTCAACCACCACAGCAAAGCCCACCGCCACCAACTCCGCCAGCCAAAACACGC
GAACCTTCAAAGGTACACGAGCCTGTCGTCCCCAAGGATTCGTTGCCGAGCGCTTCCGAGGAAGAGCTGTTGGCC
AATGCCAGTGTCGCTGTCGAGCTCGAAGAGCAACTCGAGTACCAGGCCAAGGAAGAAGAGGCGTACAAGCGAGCT
ACCATCATCGCCGATCCGAATGGACGACCTGTCAATGGACGACACACACCACCTCCCAAAGCAAGTGGCAGCCGT
GCTCAAGGACGTACCAAACGACGCGAGAAATCTGGTGTTCCGGCATTGGACAAGTATCTGTCTGATGGTGGTGAT
GATGAGCCTGAGATGACTGAGCCTGAGCGGGATGAAGAAGATGAGGACTGGGATTTTGTCGAGGCTGGGGATGGG
GAAGACAGGAACGGCGCCAAGGGGACGAGTTTGTGGGCTCGTGGTGTGGTGGATCGGTACAAACTCGCGGTGTTC
CGCAAGGGGTCGACACCAGGTCAGCAGCGTTCGGTCTCCGGGATGTCAAAGTCGTCTCAGGTATCGGAGGGTGGT
ACTGGAGCCGAGTCCCCTTCTCCTTCTAGCCGCCGTGGTCGAGGCACCGGCTTAAACTTCCGCAAACATCCCCGC
CAATTCCTCCGTCCCAAAGCCCCACCATCGAGTTATACGAATTCGACGAGGTCGTTCTCTGCGACTGCTTCGAGT
TCGCTTTCTGCTGCTGCTTCAAAATCCATGTCGACGCCTACTGGAAGTGGATTGTTGACCCCCGTCAATACGTCC
ATGTTCTCGCCCTCCCTCAAGTCGAAGGAATCGGCAGTCTCGATGGATGCGAAGAGCATGTCCTCGGATTACTCT
GGGAATGTGATTTCGCCGACTACACCATCCGCGACGAATGGTGGTCCTGAGCTTGGGTCGCCGCCAGCAGAGGGT
GAGCAAGTGGAGAAGCCGCTCAAGAACAAGAAGTTGAAGAAGTACAAGAACAATGCGGAGAAGGTGTTTTCGTTG
TTTTCTTCGAATTCGCCTAAACCTCCCCCCGCGTCGGCTGCGTCGTAA
Length 3948

Transcript

Sequence id CopciAB_464890.T0
Sequence >CopciAB_464890.T0
GCCCATCGACCACGACGAGTCCACCCTCCCCCGTCGTCGTCGCCGTCGTCGTCGACCTCAACCCCCGGGTACGGC
AACCCACAAGCGTATGCCACAGTCGACCCCCCGGATTCTGTCTATAATACAGTGACTGCCTTTGGGGATCATCAA
CCCATACATAGCCGCCTGCACATCAACCCCTTGGGTCTGCGCTTTTCGACCAGCTCAATACCCACTCCACCACCA
AACCTTACGACGACGATATGCAAGTTGTAGATACCAACATACCCGCCAACCGCAGGCAACCAGTCCGTCTAGATG
GCCAAGATGGCCCCTGGAGCGTCAGCGTCGCAGAAACACCCCACGATTCCCGCTCCTACAGTCTTTACATAAAGA
CGCCGACGCACAACCTCACGCTCACTCGCACTGCCATCGAGATTCTTGAGCTGGACCGAAAACTCCGCGACTCCC
ATCCTGCCTCCAAGATCCCAGTCCTCCCCATCGACGCCGCATCGCTCCCCATCCCTCCCAAACGCAAGTCAAACT
TTTTGAACACTCTTTCTCGTCTTGCGTCCCCGACTTCGAACAAGAATGCCAAATCGGCAGCTCGTCGAGGTGAAA
ACGCGACGACGGCGACTGCGGTTGTCGCGTCCACACTCCCCACCCCGCCTCTCACCAGCCCCGCAAGCGAGAGCA
ACGATCCCTTCACTCAGGTCGAGAACCCCAGCGAGCCAAGCCCATCAGCTGCCTCCCCCTCGGCTACCAGCACCG
CGATCGCAGCCTATCTCACCACCATCTCCAACGCTCCAGAGTTGCGCAAGGATCGTGTGTGGAAGCGTTTTGTTC
GGGTCCGGACGGATGATCTAGAGAGTGTCCGTGTTGAAAGGGCCATTAAACGTGTTCGCTCTGATCTAGCGGCAC
ATGTCGGTGGTCTTGCCAATAACCGTGCTAGTCTCATTGGGAGTGTGCACGCCGAGCATGACAAAGAAAACGCTG
ATCGAGCAGAGGCTTCGCTGCCCACTCCTGAGGATGACGCTGGGGATTCAGCTGCGCCATCCGGAGGCAATCAGG
GTGGTGCTGGGCAAGACCAGAAGGAGGGGGACGATGCTCCAGAAGCCCATGCCCGAGAGGCTACTGCTACTCCTG
CTGATGCTCAGGCGGTCAACCCTGCAGGAGCGTCAGATGCCGCGCCCGTTCAGGGTGATCAGGCGACCTCGTCTG
ATGATCAAAAGCACCTTGTCGATGGAGAGGGCCGACCCGCCACCGGAACAGATGAATCTACCGCTGCTGCACAAG
GGCACACTGCCGATGTCGACCAAACTCAAGCTGCTGCTCCTTCCTCTTCGTCTGCTGCGACATCCTCCACTTCTG
CAGCTGCTGCGGCTTCCCGTCTCCACCGTTCCCAGTCGTGCGAGCCTGACAAGTCTCACAAGATGGCTAGGGCCT
ACGCACAGTCCACGACCCCGAGCCAGGACGGCCTCGATGGTGGGATGTCATCACAGATCGAGACCGGCGACGAAT
CGTCCTTCTCCGCAGCCGTCACCCGCAAACGCAAGAAGAAGAAGAAGTCGTCAAAGAAAGTTACCATTGAAGACT
TTGAGATGATTCGTGTGCTTGGGAAGGGTTGTGCTGGTAAAGTGTTGCTTGTTCGACACAAGACTGGCTCGGGCC
TGTTCGCTCTCAAGGCTATCACGAAACGACACGTTTTGGCGCATCAAGAGCTGCAGCATACGTTGACGGAACAGG
CTGTTCTAAAACGGATGGCCGCGGAGTCGAAAGATCCCTTTGTCGTCAAGCTGTGGTGGAGTTTCCATGATAAAG
AGAACCTCTTCTTGGTTATGGACTTCCACCCCGGAGGTGATCTTGCGACCCAACTGGCTCGTTGGGGTCGACTCA
GCAGGGACCGAACCCGTTTCTACGCCGCTGAAATCGTCGAAGGTGTCGAAGGCCTCCACGCCGCCGGTGTCATCT
ACCGCGACCTCAAGCCCGAAAATATCCTCATCGCCGCGGACGGGCACATCGTTCTCACCGATTTCGGTCTCTCCA
AGGAGTTCTCCCGTCCCCACTTGTCCGCCGCTTCTTCTGCTCCGATGACTCCTAGTGGAAGTCGTTCGAGCGATT
TCTATTCGAGTGCGCCCGGGACCCCACATAGTGTGATGCCTCCGTGGATGAAGCCTGATAAGAATGGCGAAATGA
TGTACGGGTGGCCAGGTCAGCCGATTGGGAATCCGGATGTGACCACTACGTTCTGTGGGACGGCCGAGTACCTTG
CGCCTGAGGTTATCCAAGGCTTGCCGTATTCGTACGAGGTGGATTGGTGGAGTTTTGGAACCATGTTGTATGAGA
TGTTGACTGGCATGACTCCATTCTATGCCAACAACCATTCCGACATGTATGTGAGGGTGTTGCAGGACGAGTTGA
CATTCCCGGATGAGAGGGTTATGGATCAGGATACCAAGAGCTTGATTCGTGGTCTCTTGCAAAAGAATCCCGACC
TCCGAATTCGTGAACCTAGGATCAAGAAACACCCCTATTTCTCCATGATCGACTGGTGTCACGTCTACTACAAGC
GGTACATTCCTCCATATGTCCCTCCTGTCGACCGCACGGTTGCATACGACACCCAAAACTTCGATGAAACCTTCC
TCGACATGGAACCTGTTTTGGACGAATACGTCGACGAGACTGGCCAAGCCACCGACACTGATGCCGAGCCTCAGA
CCGATACCGACCGGACTGACGGTGATACCAACACCACGCCTTCTCAATCGCGCAGTTCTTCCGTCCGTCCTGCTT
CTCGAACGGCAAACGAGGAAGAAGACGACAGTGTGGACGTGTTCGATGGGTACTCGTTCAAGGGTCGACACTCGA
TACTTATGGACGATGACGACGAGGACGGTGACGAGGTGGACAGTGAAGAGGGTGAGGATGACGAGAGTATGGACC
AGGATGGCAGCTCTTCGATGATGACCGGGGAGACCAAGTCAGAGGGCGATACGATTGATGAGGATGAGGTTCGTC
AGCAACAACGTGAGGAGGATGGTGCTACTTCAGAGTTGGAGCCCAAGACGCCTGAAGCAAGGCCTTCGGCTTTGC
CTCCTGTCGACGACGCTGTATCACCAAAACCAGCGCAGCCTCAACCACCACAGCAAAGCCCACCGCCACCAACTC
CGCCAGCCAAAACACGCGAACCTTCAAAGGTACACGAGCCTGTCGTCCCCAAGGATTCGTTGCCGAGCGCTTCCG
AGGAAGAGCTGTTGGCCAATGCCAGTGTCGCTGTCGAGCTCGAAGAGCAACTCGAGTACCAGGCCAAGGAAGAAG
AGGCGTACAAGCGAGCTACCATCATCGCCGATCCGAATGGACGACCTGTCAATGGACGACACACACCACCTCCCA
AAGCAAGTGGCAGCCGTGCTCAAGGACGTACCAAACGACGCGAGAAATCTGGTGTTCCGGCATTGGACAAGTATC
TGTCTGATGGTGGTGATGATGAGCCTGAGATGACTGAGCCTGAGCGGGATGAAGAAGATGAGGACTGGGATTTTG
TCGAGGCTGGGGATGGGGAAGACAGGAACGGCGCCAAGGGGACGAGTTTGTGGGCTCGTGGTGTGGTGGATCGGT
ACAAACTCGCGGTGTTCCGCAAGGGGTCGACACCAGGTCAGCAGCGTTCGGTCTCCGGGATGTCAAAGTCGTCTC
AGGTATCGGAGGGTGGTACTGGAGCCGAGTCCCCTTCTCCTTCTAGCCGCCGTGGTCGAGGCACCGGCTTAAACT
TCCGCAAACATCCCCGCCAATTCCTCCGTCCCAAAGCCCCACCATCGAGTTATACGAATTCGACGAGGTCGTTCT
CTGCGACTGCTTCGAGTTCGCTTTCTGCTGCTGCTTCAAAATCCATGTCGACGCCTACTGGAAGTGGATTGTTGA
CCCCCGTCAATACGTCCATGTTCTCGCCCTCCCTCAAGTCGAAGGAATCGGCAGTCTCGATGGATGCGAAGAGCA
TGTCCTCGGATTACTCTGGGAATGTGATTTCGCCGACTACACCATCCGCGACGAATGGTGGTCCTGAGCTTGGGT
CGCCGCCAGCAGAGGGTGAGCAAGTGGAGAAGCCGCTCAAGAACAAGAAGTTGAAGAAGTACAAGAACAATGCGG
AGAAGGTGTTTTCGTTGTTTTCTTCGAATTCGCCTAAACCTCCCCCCGCGTCGGCTGCGTCGTAAGGACTGCTGG
TTTGGTTCTTGCATGGCGTTTGTTGTGTTCTCTGGGATTCCCTTCTTGCTCTTCCACGTTGTTGTCCGGTGCAAA
TAGTCATCATCTCGAGGAAACTTGAACATTGACATTTTATCGCTTCCCCCTTGTTTTATGCATGTCAACTGTTGA
TTGTTGTCTTCCTTTGGGCATATATTTCGTCGCTATCGTATGCATTTTTCTTGGTTCTCTATTACTACCACTTAC
TACTACTTATTTTGCTTCCACCCCCTTTCTTCTTCATTACTAGTCTCTAATCGCTTTTAATCACTCACTGTCTTT
TTTTTCGTATGTTTATTTTTCTCGACCTCGCTGTGCAAGACCATTGTTGTTATTTTTTGTGCTTTCATTGGAGGA
TCGGTCCCTTGGTCCTTACCTTGTTTTGGATGTTTTGTCGATTCAAATGTGCATTCAAATTTTCTTCTTTTTTAT
TTGTTTTCTCGGTATGATATGGAAGGCATATACATCTCGCGACGCACATCTCTTCAGCTTC
Length 4711

Gene

Sequence id CopciAB_464890.T0
Sequence >CopciAB_464890.T0
GCCCATCGACCACGACGAGTCCACCCTCCCCCGTCGTCGTCGCCGTCGTCGTCGACCTCAACCCCCGGGTACGGC
AACCCACAAGCGTATGCCACAGTCGACCCCCCGGATTCTGTCTATAATACAGTGACTGCCTTTGGGGATCATCAA
CCCATACATAGCCGCCTGCACATCAACCCCTTGGGTCTGCGCTTTTCGACCAGCTCAATACCCACTCCACCACCA
AACCTTACGACGACGATATGCAAGTTGTAGATACCAACATACCCGCCAACCGCAGGCAACCAGTCCGTCTAGATG
GCCAAGATGGCCCCTGGAGCGTCAGCGTCGCAGAAACACCCCACGATTCCCGCTCCTACAGTCTTTACATAAAGA
GTGAGTCGTCTTATTCCGCACCCCACTATGTATACATCGTCGAGCGCGTGCTTTGTCATTTCGACCCATTCTGAA
TTTGTTTTCTGATTCTAATACGTTATCCTGACAGCGCCGACGCACAACCTCACGCTCACTCGCACTGCCATCGAG
ATTCTTGAGCTGGACCGAAAACTCCGCGACTCCCATCCTGCCTCCAAGATCCCAGTCCTCCCCATCGACGCCGCA
TCGCTCCCCATCCCTCCCAAACGCAAGTCAAACTTTTTGAACACTCTTTCTCGTCTTGCGTCCCCGACTTCGAAC
AAGAATGCCAAATCGGCAGCTCGTCGAGGTGAAAACGCGACGACGGCGACTGCGGTTGTCGCGTCCACACTCCCC
ACCCCGCCTCTCACCAGCCCCGCAAGCGAGAGCAACGATCCCTTCACTCAGGTCGAGAACCCCAGCGAGCCAAGC
CCATCAGCTGCCTCCCCCTCGGCTACCAGCACCGCGATCGCAGCCTATCTCACCACCATCTCCAACGCTCCAGAG
TTGCGCAAGGATCGTGTGTGGAAGCGTTTTGTTCGGGTCCGGACGGATGATCTAGAGAGTGTCCGTGTTGAAAGG
GCCATTAAACGTGTTCGCTCTGATCTAGCGGCACATGTCGGTGGTCTTGCCAATAACCGTGCTAGTCTCATTGGG
AGTGTGCACGCCGAGCATGACAAAGAAAACGCTGATCGAGCAGAGGCTTCGCTGCCCACTCCTGAGGATGACGCT
GGGGATTCAGCTGCGCCATCCGGAGGCAATCAGGGTGGTGCTGGGCAAGACCAGAAGGAGGGGGACGATGCTCCA
GAAGCCCATGCCCGAGAGGCTACTGCTACTCCTGCTGATGCTCAGGCGGTCAACCCTGCAGGAGCGTCAGATGCC
GCGCCCGTTCAGGGTGATCAGGCGACCTCGTCTGATGATCAAAAGCACCTTGTCGATGGAGAGGGCCGACCCGCC
ACCGGAACAGATGAATCTACCGCTGCTGCACAAGGGCACACTGCCGATGTCGACCAAACTCAAGCTGCTGCTCCT
TCCTCTTCGTCTGCTGCGACATCCTCCACTTCTGCAGCTGCTGCGGCTTCCCGTCTCCACCGTTCCCAGTCGTGC
GAGCCTGACAAGTCTCACAAGATGGCTAGGGCCTACGCACAGTCCACGACCCCGAGCCAGGACGGCCTCGATGGT
GGGATGTCATCACAGATCGAGACCGGCGACGAATCGTCCTTCTCCGCAGCCGTCACCCGCAAACGCAAGAAGAAG
AAGAAGTCGTCAAAGAAAGTTACCATTGAAGACTTTGAGATGATTCGTGTGCTTGGGAAGGGTTGTGCTGGTAAA
GTGTTGCTTGTTCGACACAAGACTGGCTCGGGCCTGTTCGCTCTCAAGGCTATCACGAAACGACACGTTTTGGCG
CATCAAGAGCTGCAGCATACGTTGACGGAACAGGCTGTTCTAAAACGGATGGCCGCGGAGTCGAAAGATCCCTTT
GTCGTCAAGCTGTGGTGGAGTTTCCATGATAAAGAGAACCTCTTCTTGGTTATGGTATGTATGCATCATGTTCTC
CCGTTGACTCGTTTATTTATGTTTTTGTAGGACTTCCACCCCGGAGGTGATCTTGCGACCCAACTGGCTCGTTGG
GGTCGACTCAGCAGGGACCGAACCCGTTTCTACGCCGCTGAAATCGTCGAAGGTGTCGAAGGCCTCCACGCCGCC
GGTGTCATCTACCGCGACCTCAAGCCCGAAAATATCCTCATCGCCGCGGACGGGCACATCGTTCTCACCGATTTC
GGTCTCTCCAAGGAGTTCTCCCGTCCCCACTTGTCCGCCGCTTCTTCTGCTCCGATGACTCCTAGTGGAAGTCGT
TCGAGCGATTTCTATTCGAGTGCGCCCGGGACCCCACATAGTGTGATGCCTCCGTGGATGAAGCCTGATAAGAAT
GGCGAAATGATGTACGGGTGGCCAGGTCAGCCGATTGGGAATCCGGATGTGACCACTACGTTCTGTGGGACGGCC
GAGTACCTTGCGCCTGAGGTTATCCAAGGCTTGCCGTATTCGTACGAGGTGGATTGGTGGAGTTTTGGAACCATG
TTGTATGAGATGTTGACTGGCATGGTGAGTGTCCTTTTCCTGTGGCTGTTTGTGGGCGAGCGCTGATAACCCGGG
TCTGCAGACTCCATTCTATGCCAACAACCATTCCGACATGTATGTGAGGGTGTTGCAGGACGAGTTGACATTCCC
GGATGAGAGGGTTATGGATCAGGATACCAAGAGCTTGATTCGTGGTGTAAGTCTCGATCCTTGACTCTGCGCGAG
GCTTGTTCTAAATTATCCTCCATATAGCTCTTGCAAAAGAATCCCGACCTCCGAATTCGTGAACCTAGGATCAAG
AAACACCCCTATTTCTCCATGATGTGGGTTTTGAGCGTCCTCCAAGCAAGATGTGTACTGACGAATATGGTTTCC
CAACAGCGACTGGTGTCACGTCTACTACAAGCGGTACATTCGTAAGTTCTTTCATTTCACCTCCTTTCGTTCCAA
TCTGACAATGATGGAATGTAGCTCCATATGTCCCTCCTGTCGACCGCACGGTTGCATACGACACCCAAAACTTCG
ATGAAACCTTCCTCGACATGGAACCTGTTTTGGACGAATACGTCGACGAGACTGGCCAAGCCACCGACACTGATG
CCGAGCCTCAGACCGATACCGACCGGACTGACGGTGATACCAACACCACGCCTTCTCAATCGCGCAGTTCTTCCG
TCCGTCCTGCTTCTCGAACGGCAAACGAGGAAGAAGACGACAGTGTGGACGTGTTCGATGGGTACTCGTTCAAGG
GTCGACACTCGATACTTATGGACGATGACGACGAGGACGGTGACGAGGTGGACAGTGAAGAGGGTGAGGATGACG
AGAGTATGGACCAGGATGGCAGCTCTTCGATGATGACCGGGGAGACCAAGTCAGAGGGCGATACGATTGATGAGG
ATGAGGTTCGTCAGCAACAACGTGAGGAGGATGGTGCTACTTCAGAGTTGGAGCCCAAGACGCCTGAAGCAAGGC
CTTCGGCTTTGCCTCCTGTCGACGACGCTGTATCACCAAAACCAGCGCAGCCTCAACCACCACAGCAAAGCCCAC
CGCCACCAACTCCGCCAGCCAAAACACGCGAACCTTCAAAGGTACACGAGCCTGTCGTCCCCAAGGATTCGTTGC
CGAGCGCTTCCGAGGAAGAGCTGTTGGCCAATGCCAGTGTCGCTGTCGAGCTCGAAGAGCAACTCGAGTACCAGG
CCAAGGAAGAAGAGGCGTACAAGCGAGCTACCATCATCGCCGATCCGAATGGACGACCTGTCAATGGACGACACA
CACCACCTCCCAAAGCAAGTGGCAGCCGTGCTCAAGGACGTACCAAACGACGCGAGAAATCTGGTGTTCCGGCAT
TGGACAAGTATCTGTCTGATGGTGGTGATGATGAGCCTGAGATGACTGAGCCTGAGCGGGATGAAGAAGATGAGG
ACTGGGATTTTGTCGAGGCTGGGGATGGGGAAGACAGGAACGGCGCCAAGGGGACGAGTTTGTGGGCTCGTGGTG
TGGTGGATCGGTACAAACTCGCGGTGTTCCGCAAGGGGTCGACACCAGGTCAGCAGCGTTCGGTCTCCGGGATGT
CAAAGTCGTCTCAGGTATCGGAGGGTGGTACTGGAGCCGAGTCCCCTTCTCCTTCTAGCCGCCGTGGTCGAGGCA
CCGGCTTAAACTTCCGCAAACATCCCCGCCAATTCCTCCGTCCCAAAGCCCCACCATCGAGTTATACGAATTCGA
CGAGGTCGTTCTCTGCGACTGCTTCGAGTTCGCTTTCTGCTGCTGCTTCAAAATCCATGTCGACGCCTACTGGAA
GTGGATTGTTGACCCCCGTCAATACGTCCATGTTCTCGCCCTCCCTCAAGTCGAAGGAATCGGCAGTCTCGATGG
ATGCGAAGAGCATGTCCTCGGATTACTCTGGGAATGTGATTTCGCCGACTACACCATCCGCGACGAATGGTGGTC
CTGAGCTTGGGTCGCCGCCAGCAGAGGGTGAGCAAGTGGAGAAGCCGCTCAAGAACAAGAAGTTGAAGAAGTACA
AGAACAATGCGGAGAAGGTGTTTTCGTTGTTTTCTTCGAATTCGCCTAAACCTCCCCCCGCGTCGGCTGCGTCGT
AAGGACTGCTGGTTTGGTTCTTGCATGGCGTTTGTTGTGTTCTCTGGGATTCCCTTCTTGCTCTTCCACGTTGTT
GTCCGGTGCAAATAGTCATCATCTCGAGGAAACTTGAACATTGACATTTTATCGCTTCCCCCTTGTTTTATGCAT
GTCAACTGTTGATTGTTGTCTTCCTTTGGGCATATATTTCGTCGCTATCGTATGCATTTTTCTTGGTTCTCTATT
ACTACCACTTACTACTACTTATTTTGCTTCCACCCCCTTTCTTCTTCATTACTAGTCTCTAATCGCTTTTAATCA
CTCACTGTCTTTTTTTTCGTATGTTTATTTTTCTCGACCTCGCTGTGCAAGACCATTGTTGTTATTTTTTGTGCT
TTCATTGGAGGATCGGTCCCTTGGTCCTTACCTTGTTTTGGATGTTTTGTCGATTCAAATGTGCATTCAAATTTT
CTTCTTTTTTATTTGTTTTCTCGGTATGATATGGAAGGCATATACATCTCGCGACGCACATCTCTTCAGCTTC
Length 5098