CopciAB_493180
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_493180 Strain Coprinopsis cinerea Okayama 7
Standard name SWE1 Synonyms 493180
Uniprot id Functional description Protein tyrosine kinase
Location scaffold_4:1787285..1791456 Strand +
Gene length (nt) 4172 Transcript length (nt) 3742
CDS length (nt) 3393 Protein length (aa) 1130

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Agrocybe aegerita Agrae_CAA7259040 52.2 0 1062
Hypsizygus marmoreus strain 51987-8 Hypma_RDB25234 50.7 0 1032
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_118110 48.1 4.031E-292 955
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_56372 49.7 1.227E-291 942
Pleurotus eryngii ATCC 90797 Pleery1_1438533 45.3 8.18E-274 870
Pleurotus ostreatus PC9 PleosPC9_1_94551 45.9 8.839E-270 858
Pleurotus ostreatus PC15 PleosPC15_2_1076762 45.8 1.988E-269 857
Flammulina velutipes Flave_chr07AA00627 45.8 1.43E-263 840
Lentinula edodes W1-26 v1.0 Lentinedodes1_16438 45.1 8.998E-260 829
Lentinula edodes NBRC 111202 Lenedo1_296217 44.8 4.388E-259 827
Ganoderma sp. 10597 SS1 v1.0 Gansp1_127149 40.6 9.064E-232 747
Lentinula edodes B17 Lened_B_1_1_2612 49.1 3.787E-216 701
Schizophyllum commune H4-8 Schco3_2601543 39.6 5.999E-214 695
Grifola frondosa Grifr_OBZ68042 36.6 7.276E-159 532
Auricularia subglabra Aurde3_1_1210495 33.5 9.212E-113 394

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 37.6957 6.1052 3.5248
oidia 110.9576 32.5595 18.7982
vegetative_mycelium 89.5573 11.2934 6.5202
primordia 125.2151 2.8082 1.6213
hyphal_knot 43.4823 4.2156 2.4339
young_fruiting_body 565.162 34.1843 19.7363
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 41.8472 13.782 7.957
Wheat bran 70.338 23.9797 13.8447
Horse manure 111.5048 8.5162 4.9168
Oak leaves 95.4342 45.0719 26.0223
Hay 93.5218 13.9135 8.033
Corn stalk 90.1345 6.9407 4.0072
Pectine 90.1102 13.4452 7.7626
Microcrystalline cellulose 40.9014 5.2154 3.0111
Xylose 40.0064 7.455 4.3041
Cellobiose 28.5625 3.8732 2.2362
Lignin 81.8717 33.2962 19.2236
Apple peels 68.4705 3.6335 2.0978
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 128.2091 3.3607 1.9403
Bsubtilis 116.0092 11.7615 6.7905
Ecoli 115.3223 9.2429 5.3364
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 0.6534 0.3407 0.1967
BS 4h 6.6653 0.7754 0.4477
BS 8h 27.9768 4.7424 2.738
BS 12h 35.8228 6.9827 4.0314
Oidia 0 h 1.2973 0.0631 0.0364
Oidia 18 h 21.1131 2.0125 1.1619
Sclerotia 18.1589 2.8494 1.6451
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 73.5355 11.1617 6.4442
DM 36h 75.7365 9.6264 5.5578
DM 60h 52.87 9.1469 5.281
DM 84h 48.1598 1.2445 0.7185
DM 108h 50.0245 7.933 4.5801
DM 132h 42.2809 14.5778 8.4165
DM 156hAE 39.6155 9.196 5.3093
ELI1hAE 63.6359 15.3944 8.8879
ELI2hAE 66.6761 4.9393 2.8517
LI2hAE 65.467 7.0666 4.0799
LI6hAE 60.5402 5.7991 3.3481
LI12hAE 66.7082 7.1878 4.1499
LI18hAE 47.7407 12.0904 6.9804
LI 24hAE 34.5365 10.6481 6.1477
DM 156hAM 46.4345 5.4898 3.1695
ELI1hAM 65.7647 16.135 9.3156
ELI2hAM 78.9629 11.5473 6.6668
LI2hAM 77.8287 10.8031 6.2372
LI6hAM 74.3178 7.6708 4.4288
LI12hAM 47.9957 8.627 4.9808
LI18hAM 37.1466 19.2945 11.1397
LI 24hAM 16.2853 2.0672 1.1935
LI 24hHK 32.1628 10.1437 5.8564
L/D 6h 21.7614 2.1085 1.2173
L/D 12h 20.7925 10.17 5.8717
L/D 18h 37.1748 10.5226 6.0752
L/D 24h 46.7872 4.5297 2.6152
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 21.8104 9.2291 5.3284
Hyphal knots 43.5764 27.888 16.1012
Primordium 1 80.9949 33.7118 19.4635
Primordium 2 62.1887 14.6571 8.4623
Young Fruiting body cap 71.4271 45.8238 26.4564
Younf fruiting body gill 189.7036 141.1683 81.5036
Young fruiting body stipe 75.916 22.8504 13.1927
Mature fruiting body cap_gill 35.5595 6.3342 3.6571
Mature fruiting body stipe 75.7482 16.5715 9.5676
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 249.3064 80.9348 46.7277
NH4NO3 134.1913 37.9024 21.883
Proline 156.634 42.5721 24.579
Tryptophan 103.4076 26.0137 15.019
Isoleucin 147.7682 36.3662 20.9961
Arginine 197.955 7.7261 4.4607
Metionine 180.7431 4.0193 2.3205
NaNO3 227.8147 12.6425 7.2991
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 249.3064 80.9348 46.7277
Citrus peel 286.1699 73.9058 42.6695
Poplar leaves 209.2325 47.3289 27.3254
Typha leaves 224.3543 30.9899 17.892
Overwintered Salix leaves 240.5626 15.9437 9.2051
Reed flowering 296.5227 93.9445 54.2389
Tigernut 211.3157 13.4664 7.7748
Energy cane 199.8073 25.3682 14.6463
Guar gum 155.6306 25.9453 14.9796
Apple peels 269.715 25.3632 14.6434
Cellobiose 248.4759 16.7356 9.6623
Corn stalk 220.1263 44.5889 25.7434
Horse manure 221.1705 50.2683 29.0224
Lignin 291.3237 76.7 44.2828
Microcrystalline cellulose 222.6908 14.9567 8.6352
Oak leaves 214.996 12.1377 7.0077
Pectin esterified 159.574 26.5663 15.3381
Poplar sawdust 169.7392 65.035 37.548
Wheat bran 146.6909 21.3809 12.3442
Chlamydomonas reinhardtii 191.1057 44.1795 25.5071
Vertatryl alcohol 41.544 8.1945 4.7311
Furfural 91.2862 21.4571 12.3883
Autoclaved mycelium 225.4209 34.0719 19.6714
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 121.275 6.158 3.5553
Ribose 138.3064 10.1081 5.8359
Mannose 143.4088 9.0955 6.4315
Fructose 124.1872 7.1712 4.1403
Arabinose 125.3355 4.0403 2.3327
Xylose 152.1261 2.5864 1.4932
Galacturonic acid 141.2675 18.9019 10.913
Rhamnogalacturonan 117.2426 8.7977 5.0793
Pectin esterified 126.2473 2.9427 1.699
Polygalacturonic acid 125.4546 15.2152 8.7845
Sodium acetate 146.9743 8.6683 5.0046
No nitrogen 135.7115 16.2159 9.3623
BSA 131.7842 10.5375 6.0838
Glutamine 137.4667 19.7981 11.4304
No phosphate 149.8976 14.2923 8.2516
No carbon 135.6525 2.3694 1.6754
No sulphur 137.9192 30.1038 17.3804
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 249.3064 80.9348 46.7277
Amylose 112.7675 8.2916 4.7872
Fucose 131.4557 17.7508 10.2484
Galactose 112.0371 18.8855 10.9035
Lactose 104.9476 13.8141 7.9755
Maltose 107.6674 38.6582 22.3193
Mannitol 107.4249 31.2667 18.0518
Rhamnose 147.4379 54.6222 31.5362
Sorbitol 115.7362 22.1207 12.7714
Trehalose 147.7899 51.8962 29.9623
Glycerol 136.4598 49.541 28.6025
Glucuronic acid 111.1029 38.0183 21.9499
Arabinan 134.2522 23.717 13.693
Galactan 194.0761 23.8982 13.7976
Galactomannan 168.067 31.5396 18.2094
Glucan 182.4816 22.216 12.8264
Xylan 165.8026 9.2048 5.3144
Xyloglucan 143.4118 18.7174 10.8065
Arabinogalactan 134.3396 3.5917 2.0737
Pectin 78.3739 20.1071 11.6088
Rhamnogalacturonan 154.7989 52.5193 30.322
Polygalacturonic acid 121.0596 5.6469 3.2602
Mannan 141.7078 21.4171 12.3652
Amylopectin 136.906 49.7601 28.729
Inulin 134.57 14.6011 8.4299
BSA 268.2906 32.5789 18.8095
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 52.87 9.1469 5.281
2h WAT 60.5277 2.1648 1.2499
4h WAT 67.9796 7.5307 4.3479
8h WAT 53.8021 7.8048 4.5061
16h WAT 48.3079 2.9151 1.683
24h WAT 46.9375 1.5107 0.8722
WAT hyphal knot -30h 96.9542 8.3896 4.8438
WAT hyphal knot -22h 118.2971 9.2924 5.365
WAT hyphal knot -15h 105.3789 7.6446 4.4136
WAT hyphal knot -7.5h 61.9828 12.7633 7.3689
WAT hyphal knot 62.499 7.1137 4.1071
WAT hyphal knot +7.5h 50.9488 7.028 4.0576
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 248.4974 45.5409 26.293
Straw 3h 223.6851 49.0411 28.3139
Straw 6h 193.2613 80.9321 46.7262
Straw 12h 223.7472 31.9698 18.4578
Straw 24h 188.658 96.3142 55.607
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 107.2072 10.3824 5.9943
Frost (-20C, 30min) 30.0165 4.3751 2.526
Heat shock (47C, 2h) 44.2088 5.2746 3.0453
High CO2 32.5703 2.4604 1.4205
Drought (4% agar, 12h) 32.4132 6.1331 3.541
Oxidative (1mM H2O2, 3h) 57.3027 9.5275 5.5007
Acidic (pH4, 3h) 57.4977 7.2884 4.208
Alkaline (pH9, 3h) 84.2699 1.4028 0.8099
Osmotic (sorbitol 2h) 30.6006 3.0236 1.7457
CongoRed (3h) 55.6271 12.101 6.9865
Cobalt chloride control 21.2858 7.2701 4.1974
Cobalt chloride 2mM 18.7641 3.3898 1.9571
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 61.0133 17.6567 10.1941
Cold stimulation 57.7863 9.9029 5.7174
Scratched surface 95.0031 2.3497 1.3566
Ca2+, 200mM, 24h 27.0819 2.5796 1.4893
Cu2+, 2mM, 6h 130.5942 86.4918 49.9361
Voriconazole 75.6093 3.3793 1.9511
Trichoderma interaction, early 91.2917 6.0733 3.5064
Trichoderma interaction 60h 45.8148 7.8882 4.5542
Cobalt chloride 2mM repeat 105.7302 4.0366 2.3305
Hypoxia 47.7856 7.7834 4.4938
Hypoxia control 27.1695 9.2176 5.3218
Protoplastation control 32.3858 3.8456 2.7193
Protoplastation 3.5h 17.6607 3.3174 2.3457
Protoplastation 1.5h 44.1981 25.0526 17.7149

General data

Systematic name SWE1
Protein id CopciAB_493180.T0
Description Protein tyrosine kinase

Annotation summary

0 300 600 900 1130

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00069 Protein kinase domain IPR000719 808 1078

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000719 Protein kinase domain
IPR011009 Protein kinase-like domain superfamily
IPR008271 Serine/threonine-protein kinase, active site
IPR017441 Protein kinase, ATP binding site

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP

KEGG

KEGG Orthology
K03114

EggNOG

COG category Description
D Protein tyrosine kinase

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_493180 across fungi.

Arrow shows the origin of gene family containing CopciAB_493180.

Protein

Sequence id CopciAB_493180.T0
Sequence >CopciAB_493180.T0
MLLSTPTKHFSHHSSPYDSTMSPTYHCTPPRRCADTVRPFDSPMLTPSPLRQPTIFSPKFNNDAQDIDDLFRNSP
YRSPAQAHIFQNPAYSTKPLPIQADDEEGRIFLSSNSNSPRLSSPTSQPIFTPLKSPYNTAGRVALADRNLNEPQ
PIATSSNGPMLTSRAGIGTKRKVTPQCTPLKIEASGSFQKLGPLPAPKFATKTPHSKAEAEEFLRKQTATLTKLK
LSDRDNRMDTSNDSDCDFDEEAGANLFRTASKGKEKEEVVEAVSPGGRVVKRRARTRPLSAELRNQQPFESPSPV
KKPFLSKTRPRHSGTIAFPSSNAYRSRASPSGSSSSEAGSPAPRRRISNVASRPYIKPPVFAPRPPISRQDNLSA
ATLFFGPVIPQSAPLQSPARTRTTTSTGIPNPDIKSARSKAPNRHSYGGTGTSGDWAHIAHPSSPSPMYGVPPAA
QRDNSYISTDEDEEMSFEGPAQSSFTFSLTGSTPSPSSKKPLPRKFESIKRRSLGDYEMSVSRPYGGSLAVMPGA
STSSSSLGSDDGLITPLTTAPTNWPGPQVHDKDSDDHRPRFTDDEAEVDEFIVRTLAAATKGPAPGSKRPPGTPV
KKVRTAFLGPDRPWQSAVASKIGIKEDVAPLRTRKIPRQSMPAVMPMGGKSLLDQCTDTEDEEDSPSAKKDSRYT
KLGLGHPVGLFGGSGPFANPRTRWLMRRSSSGAFSSGSETTSQANTPTRTKGIDWQLPKLAANLSPSGTFSKLTE
RSASGSSTSSGVASSPTNRKGGSTRGTDVKPPRVSLVNRRLSEPSLTEQSGRFERDFVTVDEVGSGEFGSVIKVR
SKGGDENKVYAIKRSKRFEGAKHRLRLWEEVEVLKHLSESAELCGLDGRHPNVLAYIDSWEEDEALFIQTELCES
GNLAHFLWEYGKVFPRLDEARVWKCVVDLSNGLRFIHESGVIHLDLKPSNVFVTHEGRFKIGDFGMASLWPRMAI
VEADGSETTSSFEREGDKLYLAPEVLQGRYSKAADVFSFGMTILETATNIVVPDQGESWHRLRREDFSEVDWEGS
NELLTLIQDMMRTDPAERIDVQEVYNHCVVARAREKMEMTYAEAKANGSTVFAASPLASVPRGFLEEILGRDSSA
MDESL
Length 1130

Coding

Sequence id CopciAB_493180.T0
Sequence >CopciAB_493180.T0
ATGCTTTTATCGACCCCGACAAAACATTTCTCCCACCATTCTTCTCCCTACGACTCCACTATGTCTCCAACTTAT
CATTGTACACCGCCCAGACGATGCGCAGACACCGTTCGCCCATTTGATTCGCCAATGCTCACTCCCTCGCCCCTG
CGACAACCGACAATATTCTCCCCAAAATTCAACAATGATGCCCAGGACATCGACGACCTCTTCAGAAACTCCCCC
TACAGGTCTCCAGCGCAGGCGCATATCTTCCAGAATCCAGCCTATTCGACAAAACCACTACCTATCCAAGCGGAT
GACGAGGAGGGTCGCATCTTCCTCTCTTCCAACTCCAACTCTCCTCGATTATCTTCTCCAACCTCACAGCCTATC
TTTACACCCCTCAAGTCACCCTACAACACCGCTGGACGCGTAGCACTCGCCGACAGGAACCTCAACGAACCGCAG
CCCATCGCCACCTCATCCAATGGTCCGATGCTGACTTCGCGCGCAGGGATCGGCACCAAGCGCAAAGTCACTCCT
CAATGCACTCCGTTGAAGATAGAGGCCTCGGGCAGCTTCCAGAAACTCGGCCCTCTCCCTGCTCCCAAGTTCGCC
ACCAAGACCCCGCACAGCAAGGCCGAGGCCGAGGAATTCCTCCGCAAGCAGACAGCGACCCTCACAAAACTCAAG
CTCAGCGATAGGGACAATCGTATGGATACCAGTAACGATTCCGATTGCGACTTTGACGAAGAAGCTGGGGCCAAC
CTGTTTAGGACTGCGTCGAAAGGGAAGGAAAAGGAAGAAGTTGTCGAGGCTGTCTCCCCTGGCGGGCGTGTTGTG
AAGCGAAGGGCTCGGACAAGACCCCTGTCCGCCGAGCTTCGCAACCAACAGCCTTTCGAGTCCCCTTCGCCGGTC
AAGAAGCCTTTCCTGAGCAAGACGCGTCCAAGGCACAGTGGAACGATTGCCTTTCCCTCTTCGAATGCCTATCGC
AGCCGCGCTTCACCCAGTGGTTCCTCTTCGTCCGAAGCCGGCTCTCCAGCCCCTCGTCGCAGAATTAGCAACGTC
GCCTCTCGACCTTATATTAAACCACCCGTATTCGCTCCCCGCCCGCCTATCAGTCGTCAGGACAATTTAAGTGCG
GCTACTCTCTTCTTTGGCCCCGTTATTCCGCAGTCAGCTCCACTGCAATCCCCGGCCAGGACACGGACCACTACT
TCCACTGGCATTCCCAACCCTGACATCAAGTCTGCTCGCTCTAAAGCCCCCAACCGCCATAGCTATGGCGGTACA
GGAACCAGTGGCGACTGGGCCCATATTGCCCACCCCAGCTCCCCATCCCCTATGTACGGTGTGCCCCCAGCGGCT
CAACGTGACAACAGCTACATCAGTACCGACGAGGACGAGGAAATGTCGTTCGAAGGACCTGCTCAAAGCTCCTTC
ACTTTCAGTCTCACTGGCAGCACTCCGTCCCCGAGCTCCAAGAAACCTCTCCCTCGGAAGTTCGAGTCAATCAAA
CGACGGTCCTTGGGCGACTACGAAATGTCAGTCAGCCGGCCCTACGGTGGCTCACTCGCTGTCATGCCAGGAGCC
TCCACCAGTTCAAGCTCTCTCGGATCTGACGATGGTCTCATTACGCCTTTGACCACTGCACCGACTAACTGGCCG
GGACCGCAGGTTCACGATAAAGACTCGGACGATCATCGGCCCAGGTTCACAGATGACGAAGCCGAAGTCGACGAG
TTCATCGTACGGACACTAGCAGCTGCGACCAAGGGACCTGCACCGGGAAGCAAAAGGCCTCCCGGCACTCCCGTG
AAGAAAGTTCGCACCGCATTCTTGGGTCCCGACAGGCCATGGCAAAGCGCAGTTGCCTCTAAGATTGGGATCAAG
GAAGATGTTGCACCTCTCAGGACCAGGAAGATACCCCGCCAGAGCATGCCAGCAGTGATGCCCATGGGTGGCAAG
AGCCTTTTGGACCAATGCACCGACACTGAAGACGAAGAAGACAGTCCGAGCGCCAAAAAGGATAGCCGATATACC
AAGTTGGGATTGGGCCATCCTGTTGGGTTGTTTGGGGGAAGCGGCCCTTTCGCCAATCCTCGAACCCGATGGCTC
ATGCGCCGTAGCAGCAGCGGTGCCTTCTCCAGTGGTAGCGAAACCACCTCTCAGGCCAACACCCCGACTCGAACG
AAAGGAATAGACTGGCAACTTCCCAAACTCGCGGCGAACCTGTCGCCGTCCGGAACATTTTCCAAGTTGACAGAA
CGGTCCGCTTCCGGTTCATCGACGAGTTCAGGCGTTGCGAGCTCGCCTACGAACCGCAAGGGTGGTTCAACTCGC
GGAACGGATGTCAAACCACCGAGGGTTAGCCTGGTGAATCGACGTTTGTCAGAGCCATCCTTGACTGAGCAATCT
GGACGTTTTGAGCGCGATTTTGTTACTGTCGATGAAGTCGGCAGTGGGGAATTCGGCAGTGTCATCAAAGTTCGA
AGTAAAGGCGGGGATGAAAACAAGGTGTACGCAATCAAGAGATCGAAGCGATTCGAGGGTGCTAAACATAGACTG
CGGCTATGGGAAGAAGTTGAGGTCCTCAAACACCTCTCTGAATCCGCCGAACTCTGTGGATTAGACGGCCGACAC
CCCAACGTTTTGGCGTACATCGACAGTTGGGAAGAGGACGAAGCGCTTTTCATCCAAACGGAGTTGTGTGAGTCG
GGCAACCTGGCGCACTTCTTATGGGAATACGGCAAGGTGTTCCCGCGATTGGACGAAGCCAGAGTTTGGAAGTGT
GTGGTAGATCTGAGTAACGGTCTCCGCTTCATCCATGAATCAGGCGTCATCCACCTGGACTTGAAGCCTTCGAAC
GTCTTCGTGACGCATGAGGGACGATTCAAGATTGGTGATTTTGGGATGGCATCGCTCTGGCCGCGAATGGCGATC
GTCGAAGCTGATGGTTCTGAAACGACGAGCAGCTTCGAGCGAGAAGGCGACAAACTGTACTTGGCGCCAGAAGTG
CTACAAGGGCGGTATAGCAAAGCTGCTGATGTGTTCAGTTTCGGCATGACAATCTTGGAAACTGCAACCAACATC
GTGGTCCCTGATCAAGGAGAATCGTGGCATCGACTTCGACGAGAAGATTTCTCAGAGGTTGACTGGGAGGGGAGC
AACGAGTTGCTGACCCTGATCCAGGATATGATGCGCACCGATCCCGCGGAGCGGATCGATGTCCAAGAGGTATAC
AACCACTGTGTGGTTGCGCGTGCGAGAGAGAAGATGGAGATGACATATGCAGAGGCCAAAGCCAACGGAAGTACT
GTTTTTGCGGCATCACCGCTGGCAAGTGTCCCTCGAGGGTTTCTGGAGGAGATACTGGGGCGCGATTCAAGTGCG
ATGGATGAAAGTTTGTAG
Length 3393

Transcript

Sequence id CopciAB_493180.T0
Sequence >CopciAB_493180.T0
AGCGGCTAGTTATTTATTCACCCACAACACGCCGAAAGCACGTTCCTTTTCCTTTTGCTCGCTGTTCGACACGAC
GCGCACGACAATTTCGACGTTTATCACCACTATTTAACAAGAACCCAACACCAAATCCCAGGCCGGAGCCTGACA
ACTGGTCCTGACGCGTGTTGACACCACCCACCACCACATCACCCACACCGCCTTGCTATCCAATGCTTTTATCGA
CCCCGACAAAACATTTCTCCCACCATTCTTCTCCCTACGACTCCACTATGTCTCCAACTTATCATTGTACACCGC
CCAGACGATGCGCAGACACCGTTCGCCCATTTGATTCGCCAATGCTCACTCCCTCGCCCCTGCGACAACCGACAA
TATTCTCCCCAAAATTCAACAATGATGCCCAGGACATCGACGACCTCTTCAGAAACTCCCCCTACAGGTCTCCAG
CGCAGGCGCATATCTTCCAGAATCCAGCCTATTCGACAAAACCACTACCTATCCAAGCGGATGACGAGGAGGGTC
GCATCTTCCTCTCTTCCAACTCCAACTCTCCTCGATTATCTTCTCCAACCTCACAGCCTATCTTTACACCCCTCA
AGTCACCCTACAACACCGCTGGACGCGTAGCACTCGCCGACAGGAACCTCAACGAACCGCAGCCCATCGCCACCT
CATCCAATGGTCCGATGCTGACTTCGCGCGCAGGGATCGGCACCAAGCGCAAAGTCACTCCTCAATGCACTCCGT
TGAAGATAGAGGCCTCGGGCAGCTTCCAGAAACTCGGCCCTCTCCCTGCTCCCAAGTTCGCCACCAAGACCCCGC
ACAGCAAGGCCGAGGCCGAGGAATTCCTCCGCAAGCAGACAGCGACCCTCACAAAACTCAAGCTCAGCGATAGGG
ACAATCGTATGGATACCAGTAACGATTCCGATTGCGACTTTGACGAAGAAGCTGGGGCCAACCTGTTTAGGACTG
CGTCGAAAGGGAAGGAAAAGGAAGAAGTTGTCGAGGCTGTCTCCCCTGGCGGGCGTGTTGTGAAGCGAAGGGCTC
GGACAAGACCCCTGTCCGCCGAGCTTCGCAACCAACAGCCTTTCGAGTCCCCTTCGCCGGTCAAGAAGCCTTTCC
TGAGCAAGACGCGTCCAAGGCACAGTGGAACGATTGCCTTTCCCTCTTCGAATGCCTATCGCAGCCGCGCTTCAC
CCAGTGGTTCCTCTTCGTCCGAAGCCGGCTCTCCAGCCCCTCGTCGCAGAATTAGCAACGTCGCCTCTCGACCTT
ATATTAAACCACCCGTATTCGCTCCCCGCCCGCCTATCAGTCGTCAGGACAATTTAAGTGCGGCTACTCTCTTCT
TTGGCCCCGTTATTCCGCAGTCAGCTCCACTGCAATCCCCGGCCAGGACACGGACCACTACTTCCACTGGCATTC
CCAACCCTGACATCAAGTCTGCTCGCTCTAAAGCCCCCAACCGCCATAGCTATGGCGGTACAGGAACCAGTGGCG
ACTGGGCCCATATTGCCCACCCCAGCTCCCCATCCCCTATGTACGGTGTGCCCCCAGCGGCTCAACGTGACAACA
GCTACATCAGTACCGACGAGGACGAGGAAATGTCGTTCGAAGGACCTGCTCAAAGCTCCTTCACTTTCAGTCTCA
CTGGCAGCACTCCGTCCCCGAGCTCCAAGAAACCTCTCCCTCGGAAGTTCGAGTCAATCAAACGACGGTCCTTGG
GCGACTACGAAATGTCAGTCAGCCGGCCCTACGGTGGCTCACTCGCTGTCATGCCAGGAGCCTCCACCAGTTCAA
GCTCTCTCGGATCTGACGATGGTCTCATTACGCCTTTGACCACTGCACCGACTAACTGGCCGGGACCGCAGGTTC
ACGATAAAGACTCGGACGATCATCGGCCCAGGTTCACAGATGACGAAGCCGAAGTCGACGAGTTCATCGTACGGA
CACTAGCAGCTGCGACCAAGGGACCTGCACCGGGAAGCAAAAGGCCTCCCGGCACTCCCGTGAAGAAAGTTCGCA
CCGCATTCTTGGGTCCCGACAGGCCATGGCAAAGCGCAGTTGCCTCTAAGATTGGGATCAAGGAAGATGTTGCAC
CTCTCAGGACCAGGAAGATACCCCGCCAGAGCATGCCAGCAGTGATGCCCATGGGTGGCAAGAGCCTTTTGGACC
AATGCACCGACACTGAAGACGAAGAAGACAGTCCGAGCGCCAAAAAGGATAGCCGATATACCAAGTTGGGATTGG
GCCATCCTGTTGGGTTGTTTGGGGGAAGCGGCCCTTTCGCCAATCCTCGAACCCGATGGCTCATGCGCCGTAGCA
GCAGCGGTGCCTTCTCCAGTGGTAGCGAAACCACCTCTCAGGCCAACACCCCGACTCGAACGAAAGGAATAGACT
GGCAACTTCCCAAACTCGCGGCGAACCTGTCGCCGTCCGGAACATTTTCCAAGTTGACAGAACGGTCCGCTTCCG
GTTCATCGACGAGTTCAGGCGTTGCGAGCTCGCCTACGAACCGCAAGGGTGGTTCAACTCGCGGAACGGATGTCA
AACCACCGAGGGTTAGCCTGGTGAATCGACGTTTGTCAGAGCCATCCTTGACTGAGCAATCTGGACGTTTTGAGC
GCGATTTTGTTACTGTCGATGAAGTCGGCAGTGGGGAATTCGGCAGTGTCATCAAAGTTCGAAGTAAAGGCGGGG
ATGAAAACAAGGTGTACGCAATCAAGAGATCGAAGCGATTCGAGGGTGCTAAACATAGACTGCGGCTATGGGAAG
AAGTTGAGGTCCTCAAACACCTCTCTGAATCCGCCGAACTCTGTGGATTAGACGGCCGACACCCCAACGTTTTGG
CGTACATCGACAGTTGGGAAGAGGACGAAGCGCTTTTCATCCAAACGGAGTTGTGTGAGTCGGGCAACCTGGCGC
ACTTCTTATGGGAATACGGCAAGGTGTTCCCGCGATTGGACGAAGCCAGAGTTTGGAAGTGTGTGGTAGATCTGA
GTAACGGTCTCCGCTTCATCCATGAATCAGGCGTCATCCACCTGGACTTGAAGCCTTCGAACGTCTTCGTGACGC
ATGAGGGACGATTCAAGATTGGTGATTTTGGGATGGCATCGCTCTGGCCGCGAATGGCGATCGTCGAAGCTGATG
GTTCTGAAACGACGAGCAGCTTCGAGCGAGAAGGCGACAAACTGTACTTGGCGCCAGAAGTGCTACAAGGGCGGT
ATAGCAAAGCTGCTGATGTGTTCAGTTTCGGCATGACAATCTTGGAAACTGCAACCAACATCGTGGTCCCTGATC
AAGGAGAATCGTGGCATCGACTTCGACGAGAAGATTTCTCAGAGGTTGACTGGGAGGGGAGCAACGAGTTGCTGA
CCCTGATCCAGGATATGATGCGCACCGATCCCGCGGAGCGGATCGATGTCCAAGAGGTATACAACCACTGTGTGG
TTGCGCGTGCGAGAGAGAAGATGGAGATGACATATGCAGAGGCCAAAGCCAACGGAAGTACTGTTTTTGCGGCAT
CACCGCTGGCAAGTGTCCCTCGAGGGTTTCTGGAGGAGATACTGGGGCGCGATTCAAGTGCGATGGATGAAAGTT
TGTAGCAGAATCTCCCGGGGCGGTGCCGAGGGGATGTAGATAATGATTGTCGATTTGTTATTCTTGCTTTTTTCG
CTTTGCAACTGGGACACTATGCTTAATTACACAGTACTATAGGAATTGTTGATTTACATGACATGCT
Length 3742

Gene

Sequence id CopciAB_493180.T0
Sequence >CopciAB_493180.T0
AGCGGCTAGTTATTTATTCACCCACAACACGCCGAAAGCACGTTCCTTTTCCTTTTGCTCGCTGTTCGACACGAC
GCGCACGACAATTTCGACGTTTATCACCACTATTTAACAAGAACCCAACACCAAATCCCAGGCCGGAGCCTGACA
ACTGGTCCTGACGCGTGTTGACACCACCCACCACCACATCACCCACACCGCCTTGCTATCCAATGCTTTTATCGA
CCCCGACAAAACATTTCTCCCACCATTCTTCTCCCTACGACTCCACTATGTCTCCAACTTATCATTGTACACCGC
CCAGACGATGCGCAGACACCGTTCGCCCATTTGATTCGCCAATGCTCACTCCCTCGCCCCTGCGACAACCGACAA
TATTCTCCCCAAAATTCAACAATGATGCCCAGGACATCGACGACCTCTTCAGAAACTCCCCCTACAGGTCTCCAG
CGCAGGCGCATATCTTCCAGAATCCAGCCTATTCGACAAAACCACTACCTATCCAAGCGGATGACGAGGAGGGTC
GCATCTTCCTCTCTTCCAACTCCAACTCTCCTCGATTATCTTCTCCAACCTCACAGCCTATCTTTACACCCCTCA
AGTCACCCTACAACACCGCTGGACGCGTAGCACTCGCCGACAGGAACCTCAACGAACCGCAGCCCATCGCCACCT
CATCCAATGGTCCGATGCTGACTTCGCGCGCAGGGATCGGCACCAAGCGCAAAGTCACTCCTCAATGCACTCCGT
TGAAGATAGAGGCCTCGGGCAGCTTCCAGAAACTCGGCCCTCTCCCTGCTCCCAAGTTCGCCACCAAGACCCCGC
ACAGCAAGGCCGAGGCCGAGGAATTCCTCCGCAAGCAGACAGCGACCCTCACAAAACTCAAGCTCAGCGATAGGG
ACAATCGTATGGATACCAGTAACGATTCCGATTGCGACTTTGACGAAGAAGCTGGGGCCAACCTGTTTAGGACTG
CGTCGAAAGGGAAGGAAAAGGAAGAAGTTGTCGAGGCTGTCTCCCCTGGCGGGCGTGTTGTGAAGCGAAGGGCTC
GGACAAGACCCCTGTCCGCCGAGCTTCGCAACCAACAGCCTTTCGAGTCCCCTTCGCCGGTCAAGGTATGTAACG
TGCTACAACGTCGCTTGGCCCGCCCTTACGCGTCTTTAAAGAAGCCTTTCCTGAGCAAGACGCGTCCAAGGCACA
GTGGAACGATTGCCTTTCCCTCTTCGAATGCCTATCGCAGCCGCGCTTCACCCAGTGGTTCCTCTTCGTCCGAAG
CCGGCTCTCCAGCCCCTCGTCGCAGAATTAGCAACGTCGCCTCTCGACCTTATATTAAACCACCCGTATTCGCTC
CCCGCCCGCCTATCAGTCGTCAGGACAATTTAAGTGCGGCTACTCTCTTCTTTGGCCCCGTTATTCCGCAGTCAG
CTCCACTGCAATCCCCGGCCAGGACACGGACCACTACTTCCACTGGCATTCCCAACCCTGACATCAAGTCTGCTC
GCTCTAAAGCCCCCAACCGCCATAGCTATGGCGGTACAGGAACCAGTGGCGACTGGGCCCATATTGCCCACCCCA
GCTCCCCATCCCCTATGTACGGTGTGCCCCCAGCGGCTCAACGTGACAACAGCTACATCAGTACCGACGAGGACG
AGGAAATGTCGTTCGAAGGACCTGCTCAAAGCTCCTTCACTTTCAGTCTCACTGGCAGCACTCCGTCCCCGAGCT
CCAAGAAACCTCTCCCTCGGAAGTTCGAGTCAATCAAACGACGGTCCTTGGGCGACTACGAAATGTCAGTCAGCC
GGCCCTACGGTGGCTCACTCGCTGTCATGCCAGGAGCCTCCACCAGTTCAAGCTCTCTCGGATCTGACGATGGTC
TCATTACGCCTTTGACCACTGCACCGACTAACTGGCCGGGACCGCAGGTTCACGATAAAGACTCGGACGATCATC
GGCCCAGGTTCACAGATGACGAAGCCGAAGTCGACGAGTTCATCGTACGGACACTAGCAGCTGCGACCAAGGGAC
CTGCACCGGGAAGCAAAAGGCCTCCCGGCACTCCCGTGAAGAAAGTTCGCACCGCATTCTTGGGTCCCGACAGGC
CATGGCAAAGCGCAGTTGCCTCTAAGATTGGGATCAAGGAAGATGTTGCACCTCTCAGGACCAGGAAGATACCCC
GCCAGAGCATGCCAGCAGTGATGCCCATGGGTGGCAAGAGCCTTTTGGACCAATGCACCGACACTGAAGACGAAG
AAGACAGTCCGAGCGCCAAAAAGGATAGCCGATATACCAAGTTGGGATTGGGCCATCCTGTTGGGTTGTTTGGGG
GAAGCGGCCCTTTCGCCAATCCTCGAACCCGATGGCTCATGCGCCGTAGCAGCAGCGGTGCCTTCTCCAGTGGTA
GCGAAACCACCTCTCAGGCCAACACCCCGACTCGAACGAAAGGAATAGGTAAGTCTGTTTAACTGTAATTCTCGC
TCAGTACACTAATGATTGCCCTCCCCTATCAGACTGGCAACTTCCCAAACTCGCGGCGAACCTGTCGCCGTCCGG
AACATTTTCCAAGTTGACAGAACGGTCCGCTTCCGGTTCATCGACGAGTTCAGGCGTTGCGAGCTCGCCTACGAA
CCGCAAGGGTGGTTCAACTCGCGGAACGGATGTCAAACCACCGAGGGTTAGCCTGGTGAATCGACGTTTGTCAGA
GCCATCCTTGACTGAGCAATCTGGACGTTTTGAGCGCGATTTTGTTACTGTCGATGAAGTCGGCAGTGGGGAATT
CGGCAGTGTCATCAAAGTTCGAAGTAAAGGCGGGGATGAAAACAAGGTGTACGCAATCAAGAGATCGAAGCGATT
CGAGGGTGCTAAACATAGGTGAGTTGCTTTTTCGGGACTTCTGAGGCCGCCTCCGCACTATGCGAATGAGGAATG
ACGACAAAAATCTTCTCAACTTCTTCGGTTGTTATGGAAATGGAGCGCTGACTTGGGATTTGTGACAGACTGCGG
CTATGGGAAGAAGTTGAGGTCCTCAAACACCTCTCTGAATCCGCCGAACTCTGTGGATTAGACGGCCGACACCCC
AACGTTTTGGCGTACATCGACAGTTGGGAAGAGGACGAAGCGCTTTTCATCCAAACGGAGTTGTGTGAGTCGGGC
AACCTGGCGCACTTCTTATGGGAATACGGCAAGGTGTTCCCGCGATTGGACGAAGCCAGAGTTTGGAAGTGTGTG
GTAGATCTGAGTAACGTAAGTAATTAATCTCGCTCGCTTTCAACAGCAACGTCGGTGCTCAACATTGTTTATTCA
CCAGGGTCTCCGCTTCATCCATGAATCAGGCGTCATCCACCTGGACTTGAAGCCTTCGAACGTCTTCGTGACGCA
TGAGGGACGATTCAAGATTGGTGATTTTGGGATGGCATCGCTCTGGCCGCGAATGGCGATCGTCGAAGCTGATGG
TTCTGAAACGACGAGCAGCTTCGAGCGAGAAGGCGACAAACTGTACTTGGCGCCAGAAGTGCTACAAGGGCGGTA
TAGCAAAGCTGCTGATGTGTTCAGGTAAGCCTCGCACGGTTCCATCGGTGTTCTGTTTTTACAACCTTCTCATGT
CAACCTTCCAGTTTCGGCATGACAATCTTGGAAACTGCAACCAACATCGTGGTCCCTGATCAGTGAGTGTTTCCC
GCGGACCGTCCGTTCCGTTGCTGTGATACTGAAGGATTGCGTCTGTCTTTTTCCAGAGGAGAATCGTGGCATCGA
CTTCGACGAGAAGATTTCTCAGAGGTTGACTGGGAGGGGAGCAACGAGTTGCTGACCCTGATCCAGGATATGATG
CGCACCGATCCCGCGGAGCGGATCGATGTCCAAGAGGTATACAACCACTGTGTGGTTGCGCGTGCGAGAGAGAAG
ATGGAGATGACATATGCAGAGGCCAAAGCCAACGGAAGTACTGTTTTTGCGGCATCACCGCTGGCAAGTGTCCCT
CGAGGGTTTCTGGAGGAGATACTGGGGCGCGATTCAAGTGCGATGGATGAAAGTTTGTAGCAGAATCTCCCGGGG
CGGTGCCGAGGGGATGTAGATAATGATTGTCGATTTGTTATTCTTGCTTTTTTCGCTTTGCAACTGGGACACTAT
GCTTAATTACACAGTACTATAGGAATTGTTGATTTACATGACATGCT
Length 4172