CopciAB_498122
Coprinopsis cinerea A43mutB43mut pab1-1 #326

General data

Systematic name CopciAB_498122 Strain Coprinopsis cinerea Okayama 7
Standard name - Synonyms 498122
Uniprot id Functional description Protein tyrosine kinase
Location scaffold_10:1186745..1191136 Strand -
Gene length (nt) 4392 Transcript length (nt) 4047
CDS length (nt) 3492 Protein length (aa) 1163

Reciprocal best hits in model fungi

Strain name Gene / Protein name

Orthologs in mushroom models

Strain name Gene / Protein name Pident E-value Bits
Hypsizygus marmoreus strain 51987-8 Hypma_RDB23610 45.6 5.584E-300 948
Flammulina velutipes Flave_chr02AA00405 42.4 6.109E-245 787
Agrocybe aegerita Agrae_CAA7262091 29.7 3.956E-191 629
Lentinula edodes W1-26 v1.0 Lentinedodes1_13540 35.4 4.033E-189 623
Agaricus bisporus var bisporus (H97) Agabi_varbisH97_2_153572 48.2 2.862E-161 540
Agaricus bisporus var. burnettii JB137-S8 Agabi_varbur_1_47208 53.3 7.2E-151 509
Pleurotus ostreatus PC15 PleosPC15_2_34352 51.5 8.045E-150 506
Schizophyllum commune H4-8 Schco3_1104624 50.5 4.785E-136 465
Pleurotus eryngii ATCC 90797 Pleery1_1392944 62.5 8.775E-133 455
Pleurotus ostreatus PC9 PleosPC9_1_59097 62.8 7.303E-133 455
Lentinula edodes B17 Lened_B_1_1_2094 59.4 5.687E-124 428
Lentinula edodes NBRC 111202 Lenedo1_1034100 59.4 7.187E-124 428
Grifola frondosa Grifr_OBZ74952 43 5.611E-119 413
Ganoderma sp. 10597 SS1 v1.0 Gansp1_53085 43.8 8.396E-111 388
Auricularia subglabra Aurde3_1_1240918 27.6 1.671E-100 357

Expression

Name Summary Attribution Assay type
Carbon metabolism Transcriptional changes along alternative morphogenetic paths of C. cinerea Xie et al. 2020 RNA-Seq
Sample Mean cpm SD cpm Se of mean
sclerotia 115.3602 5.2343 3.022
oidia 82.2489 12.6381 7.2966
vegetative_mycelium 84.1566 5.9609 3.4415
primordia 47.6345 2.1848 1.2614
hyphal_knot 75.1951 3.9538 2.2827
young_fruiting_body 45.8834 8.4575 4.8829
Complex carbon sources 1 (long incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control - glucose 80.3873 12.1583 7.0196
Wheat bran 55.6423 20.2346 11.6824
Horse manure 83.8959 37.5154 21.6595
Oak leaves 148.256 58.2839 33.6502
Hay 95.4467 15.4267 8.9066
Corn stalk 113.9714 20.7093 11.9565
Pectine 85.3773 2.7795 1.6048
Microcrystalline cellulose 76.0316 11.5432 6.6645
Xylose 79.8044 11.4445 6.6075
Cellobiose 80.9759 14.0754 8.1264
Lignin 94.6758 16.9722 9.7989
Apple peels 101.7224 3.6715 2.1197
Coprinopsis challenged with bacteria Transcriptional response to Bacillus subtilis and Escherichia coli. Kombrink et al. 2018 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Control 73.332 1.9919 1.15
Bsubtilis 72.9233 5.7414 3.3148
Ecoli 53.5079 0.9532 0.5503
Early development 1 Time series expression profiling of basidiospore and oidium germination Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
BS 0h 38.0794 6.4614 3.7305
BS 4h 33.0456 2.752 1.5889
BS 8h 41.7538 1.3385 0.7728
BS 12h 31.1604 10.3193 5.9578
Oidia 0 h 44.5674 13.3948 7.7335
Oidia 18 h 37.498 8.745 5.0489
Sclerotia 25.9729 4.7008 2.714
Early development 2 Time series expression profiling of mycelial growth, light induction and fruiting body initiation. Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
DM 12h 27.8211 4.1592 2.4013
DM 36h 42.6732 1.4636 0.845
DM 60h 42.428 2.0838 1.2031
DM 84h 35.6188 2.6288 1.5177
DM 108h 34.6544 4.9907 2.8814
DM 132h 35.5944 4.9162 2.8384
DM 156hAE 36.5019 1.1046 0.6378
ELI1hAE 36.6971 2.5143 1.4516
ELI2hAE 35.5468 8.6562 4.9977
LI2hAE 35.5057 4.669 2.6956
LI6hAE 37.874 2.3127 1.3352
LI12hAE 32.4536 4.42 2.5519
LI18hAE 30.5821 4.7589 2.7476
LI 24hAE 36.3881 5.6904 3.2853
DM 156hAM 33.6294 0.3595 0.2075
ELI1hAM 33.7332 1.4942 0.8627
ELI2hAM 34.3065 4.3112 2.4891
LI2hAM 36.9049 6.8287 3.9425
LI6hAM 40.6797 3.3889 1.9566
LI12hAM 29.2047 1.4333 0.8275
LI18hAM 29.8095 5.5826 3.2231
LI 24hAM 29.4616 3.2545 1.879
LI 24hHK 30.4054 3.4506 1.9922
L/D 6h 33.6208 4.0266 2.3248
L/D 12h 33.5904 6.0099 3.4698
L/D 18h 38.9872 8.1116 4.6833
L/D 24h 39.0828 3.5543 2.0521
Fruiting body development RNA-Seq analysis of fruiting body development Krizsan et al. 2019 RNA-Seq
Sample Mean cpm SD cpm Se of mean
Vegetative mycelium 36.8774 6.9951 4.0386
Hyphal knots 57.3005 15.1804 8.7644
Primordium 1 57.4929 7.2255 4.1716
Primordium 2 46.1317 14.8959 8.6002
Young Fruiting body cap 35.6977 1.1138 0.643
Younf fruiting body gill 21.3931 2.9961 1.7298
Young fruiting body stipe 37.8154 7.9827 4.6088
Mature fruiting body cap_gill 22.0388 1.8735 1.0817
Mature fruiting body stipe 28.9443 8.2764 4.7784
Nitrogen sources (12h incubation) Expression profiling on diverse nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Complete medium - control 64.7255 5.1856 2.9939
NH4NO3 84.4718 5.0498 2.9155
Proline 89.7325 11.8348 6.8328
Tryptophan 82.965 11.9856 6.9199
Isoleucin 82.6517 11.1442 6.4341
Arginine 82.4658 10.0489 5.8017
Metionine 87.5724 8.1128 4.6839
NaNO3 67.3556 7.0381 4.0634
Plant biomass (12h incubation) Expression profiling on diverse plant biomasses as carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 64.7255 5.1856 2.9939
Citrus peel 56.5835 9.6946 5.5972
Poplar leaves 74.4557 8.4148 4.8583
Typha leaves 65.1869 6.4879 3.7458
Overwintered Salix leaves 71.4788 7.4449 4.2983
Reed flowering 55.1422 10.2024 5.8904
Tigernut 53.6234 2.4482 1.4135
Energy cane 65.8706 2.8045 1.6192
Guar gum 63.7445 17.8753 10.3203
Apple peels 71.903 12.0371 6.9496
Cellobiose 87.4147 3.3704 1.9459
Corn stalk 76.6589 6.0826 3.5118
Horse manure 65.8998 19.9949 11.544
Lignin 41.4825 7.1142 4.1074
Microcrystalline cellulose 74.1354 12.1416 7.01
Oak leaves 66.4016 11.7721 6.7966
Pectin esterified 50.7188 9.4458 5.4535
Poplar sawdust 65.271 18.132 10.4685
Wheat bran 46.8203 7.7604 4.4805
Chlamydomonas reinhardtii 70.6541 9.9283 5.7321
Vertatryl alcohol 49.6667 3.6574 2.1116
Furfural 50.2424 4.5459 2.6245
Autoclaved mycelium 76.1823 4.0669 2.348
Simple and complex carbon and nitrogen sources Expression profiling on diverse complex carbon and nitrogen sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 70.6918 4.8844 2.82
Ribose 81.6712 3.6029 2.0801
Mannose 85.8159 4.4818 3.1691
Fructose 72.541 2.4719 1.4272
Arabinose 84.7738 1.9521 1.127
Xylose 83.7838 3.5321 2.0392
Galacturonic acid 75.0871 9.7823 5.6478
Rhamnogalacturonan 73.9806 4.4412 2.5641
Pectin esterified 68.6893 3.2427 1.8722
Polygalacturonic acid 73.5586 2.7479 1.5865
Sodium acetate 82.8738 4.799 2.7707
No nitrogen 82.6691 5.2825 3.0498
BSA 75.7866 11.2027 6.4679
Glutamine 86.2097 4.132 2.3856
No phosphate 87.3104 5.3127 3.0673
No carbon 80.4389 5.4292 3.839
No sulphur 95.6203 9.2955 5.3667
Simple and complex carbon sources (12h incubation) Expression profiling on diverse complex carbon sources. Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose - control 64.7255 5.1856 2.9939
Amylose 59.9653 3.7296 2.1533
Fucose 60.8269 6.1436 3.547
Galactose 62.7034 2.6535 1.532
Lactose 72.4998 3.6019 2.0796
Maltose 65.0475 4.741 2.7372
Mannitol 74.5549 9.0342 5.2159
Rhamnose 68.7519 1.9672 1.1358
Sorbitol 61.6009 0.8004 0.4621
Trehalose 60.7307 7.4159 4.2816
Glycerol 67.154 8.8155 5.0897
Glucuronic acid 67.1028 7.1615 4.1347
Arabinan 59.6894 11.5116 6.6462
Galactan 64.6608 7.2929 4.2106
Galactomannan 64.5052 15.922 9.1926
Glucan 67.9919 10.5689 6.1019
Xylan 65.4842 2.4793 1.4314
Xyloglucan 76.6889 5.2349 3.0224
Arabinogalactan 79.3536 2.515 1.452
Pectin 34.3923 15.5597 8.9834
Rhamnogalacturonan 30.3547 5.0482 2.9146
Polygalacturonic acid 70.1855 5.1015 2.9453
Mannan 56.696 1.395 0.8054
Amylopectin 47.567 5.0409 2.9103
Inulin 81.9841 2.4936 1.4397
BSA 69.0589 2.2611 1.3054
Starvation induced by water agar transfer Expression profiling on starvation induced by transfer to water agar Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Control 42.428 2.0838 1.2031
2h WAT 36.2613 4.3067 2.4865
4h WAT 32.3913 3.3831 1.9532
8h WAT 28.8373 1.6568 0.9566
16h WAT 30.1073 4.4074 2.5446
24h WAT 29.4959 0.8666 0.5003
WAT hyphal knot -30h 38.8182 2.4141 1.3938
WAT hyphal knot -22h 39.976 4.1468 2.3941
WAT hyphal knot -15h 36.0842 5.9259 3.4213
WAT hyphal knot -7.5h 32.0868 3.4504 1.9921
WAT hyphal knot 31.5349 3.8538 2.225
WAT hyphal knot +7.5h 31.7741 3.8876 2.2445
Straw time series Time series expression profiling on straw as a carbon source Hegedus et al. RNA-Seq
Sample Mean cpm SD cpm Se of mean
Glucose control 61.5942 16.3041 9.4132
Straw 3h 61.0288 16.3002 9.4109
Straw 6h 54.5846 12.1065 6.9897
Straw 12h 76.2484 9.2153 5.3205
Straw 24h 64.7824 19.2874 11.1356
Stress conditions 1 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 28.7849 5.5427 3.2001
Frost (-20C, 30min) 39.1472 3.2434 1.8726
Heat shock (47C, 2h) 43.4792 6.0759 3.5079
High CO2 26.4075 1.3939 0.8048
Drought (4% agar, 12h) 30.9213 5.9883 3.4574
Oxidative (1mM H2O2, 3h) 35.2725 5.6245 3.2473
Acidic (pH4, 3h) 18.5528 3.3091 1.9105
Alkaline (pH9, 3h) 31.1346 3.84 2.217
Osmotic (sorbitol 2h) 20.6509 3.2482 1.8753
CongoRed (3h) 26.4857 1.9364 1.118
Cobalt chloride control 30.8752 3.5648 2.0581
Cobalt chloride 2mM 28.2722 3.3602 1.94
Stress conditions 2 Expression profiling under various stress conditions Hegedus et al. QuantSeq
Sample Mean cpm SD cpm Se of mean
Flask control 25.6204 4.8181 2.7817
Cold stimulation 24.7855 5.1042 2.9469
Scratched surface 47.684 2.3784 1.3732
Ca2+, 200mM, 24h 26.0271 4.4882 2.5913
Cu2+, 2mM, 6h 27.9593 7.3525 4.245
Voriconazole 28.6221 2.0107 1.1609
Trichoderma interaction, early 39.8599 5.0675 2.9257
Trichoderma interaction 60h 21.4087 10.2376 5.9107
Cobalt chloride 2mM repeat 33.5976 2.2443 1.2958
Hypoxia 26.2499 2.1154 1.2213
Hypoxia control 24.6709 2.1265 1.2277
Protoplastation control 21.1707 2.0257 1.4324
Protoplastation 3.5h 21.8347 3.1887 2.2547
Protoplastation 1.5h 26.4379 5.0858 3.5962

General data

Systematic name -
Protein id CopciAB_498122.T0
Description Protein tyrosine kinase

Annotation summary

0 300 600 900 1163

Conserved domains

Analysis Signature accession Signature description InterPro Accession Start End
Pfam PF00786 P21-Rho-binding domain IPR000095 149 185
Pfam PF00069 Protein kinase domain IPR000719 911 1138

SignalP

Prediction Start End Score
No records

Transmembrane domains

Domain n Start End Length
No records

InterPro

Accession Description
IPR000095 CRIB domain
IPR000719 Protein kinase domain
IPR020635 Tyrosine-protein kinase, catalytic domain
IPR036936 CRIB domain superfamily
IPR011009 Protein kinase-like domain superfamily

GO

Go id Term Ontology
GO:0004672 protein kinase activity MF
GO:0005524 ATP binding MF
GO:0006468 protein phosphorylation BP
GO:0004713 protein tyrosine kinase activity MF

KEGG

KEGG Orthology
K19833

EggNOG

COG category Description
T Protein tyrosine kinase

CAZy

Class Family Subfamily
No records

Transcription factor

Group
No records

Conservation of CopciAB_498122 across fungi.

Arrow shows the origin of gene family containing CopciAB_498122.

Protein

Sequence id CopciAB_498122.T0
Sequence >CopciAB_498122.T0
MASSTSASGPSSTTLGSRFSTLKAFKFRDNRPPPPPPKDEYYLRNRSMASLSPDAVSIPPNSPLSPQPHRLYTSQ
TSHDPNQSTMSLTSSIASGLSSPPTEGKRPQSRGKEKALSFLKFGKRSPKSPPTKDASWDSAVPPLPSNGDDGIS
TPFNFQHNIHVNEGLVGLPPTWSAALSQAGFSDEEIIAIHNRRAAGSRSPNSQYVLNARPPSPRIPHPYQQSASN
VPIIAQPGPRTTSLPRQVSDASLRSTSTRQRHPIPFGSPASASTASLHSSNAGSISNIKAVRQGASQDHSSRNHT
PQLSISYSSDSNHSGVSGEDVYQQSRNGNFPKDVSTPPGKPAHAANPSIAQSFMSQASSLLNGHSHNRNESNASS
TSKRLFGSQPSLWSSPSSSSTASRPQTAANTSTSSNHSNAAVTQPTDNNASPEASPPQPKRTNALPPRLSLHQAS
GSGDLSAWAGMLLSGLSSDLDDKLTLGPSPLGPTPLTPQSAPASAATQGPSSFTVSNRPTHTSHSRSLGGESSKA
RPEPLSELEEPIDNDAQYANLSPPWTGDAGSSSPLWSEIEGILSQGRSPTASEDRHEPGPYSAALAETFSPTLPF
SPEEDRMAQERRLRNEASRERLEREEDLNRLSVNTARPNRDSSRSSTSTVGPTTIVRNVSVARRAGAFVINNSNP
VSPIDHDASSVPPTPIVPPPRQLPNRPAPIDAGHSPSPPNSSFDSEESSASSSQSQDRYPTPTTANSTSSPLRYY
LEPSPSPSQASFSPVVARHKEYPNVPPAYDIDEDLDEDDEEGTNLIIPHQIITAPSPQANRPTIVIENVSPGGAL
STALPTGTPASPFQRYRGWLSEVVQPLEEYIDEGVDPRDHYLDLKEIAEGESGSVFSARLIQKDADKLRLPAHVK
AQDADDFANNREVLVAIKSVAIVPSGSPKLKDLQHELGLMKGLHHENVIGLDSLYVDFLEDTLWIRMELMERSLA
DIIGLVDAGLMLPDRMMARFASDILSGLDYLQRHHIAHRDVRSDNLLINKHGVLKLTDFANAVQVSAQNPMRTEP
AGVLYWQAPEVRSPPYNAMKVDVWSLGATVWEMAETQPPFADTNEFGDRWPPLSRPQLVSPAFHEFLRLCSEPAA
SRPTAGELLKTPFVKNACGRAVIVQLLSQCIAIESAFE
Length 1163

Coding

Sequence id CopciAB_498122.T0
Sequence >CopciAB_498122.T0
ATGGCAAGCAGCACGAGCGCGTCGGGTCCTTCATCCACCACCCTGGGTTCCAGGTTTTCGACCTTAAAGGCCTTC
AAGTTCAGGGACAATAGACCACCACCGCCGCCTCCAAAGGACGAATATTATCTTAGGAACAGGTCGATGGCCTCG
TTGTCGCCAGACGCGGTTTCAATTCCACCAAACTCACCGCTGTCGCCGCAACCCCACCGGCTGTACACATCACAG
ACATCGCACGACCCAAACCAGTCAACGATGTCGCTAACGTCGTCGATAGCCTCCGGTTTATCCTCGCCACCCACG
GAAGGCAAAAGACCACAGTCCAGGGGAAAGGAAAAGGCGCTCTCCTTTTTGAAGTTTGGCAAACGGAGTCCCAAA
TCGCCTCCAACCAAGGACGCCAGTTGGGACAGCGCCGTACCTCCGTTACCGTCGAACGGCGACGATGGGATCTCC
ACGCCGTTCAATTTCCAGCACAACATTCACGTTAACGAAGGACTCGTTGGCCTCCCTCCAACTTGGTCAGCAGCG
CTGTCGCAAGCAGGGTTTTCTGACGAGGAAATAATCGCCATCCACAACCGTCGCGCAGCAGGTTCGCGATCCCCG
AATTCCCAATATGTGCTGAACGCTCGTCCACCTTCTCCCCGTATACCCCACCCGTATCAGCAGAGTGCCTCCAAT
GTCCCGATCATTGCGCAGCCTGGCCCAAGAACGACGTCTTTGCCCAGACAGGTCTCGGACGCATCGCTGAGGAGC
ACTTCGACGCGCCAGCGGCACCCGATACCCTTTGGTAGCCCTGCGTCCGCGTCAACAGCGTCGTTACATTCCAGC
AATGCCGGAAGTATCAGCAACATCAAAGCGGTTCGACAAGGTGCTTCTCAAGACCACTCTAGTCGGAACCACACT
CCGCAACTATCAATTTCTTATTCGTCCGACTCCAATCACAGCGGTGTCAGTGGTGAAGATGTCTATCAGCAGTCG
AGGAATGGCAATTTCCCAAAGGACGTGTCAACACCTCCCGGTAAACCTGCACACGCTGCCAACCCTTCGATCGCT
CAGTCATTCATGTCTCAAGCTTCATCACTTCTGAATGGTCACAGTCACAATCGTAACGAATCAAACGCCTCTTCG
ACATCCAAGCGCCTGTTCGGGAGCCAACCTTCCCTATGGTCTTCGCCGTCGTCATCTTCAACTGCAAGTCGACCA
CAAACAGCTGCCAATACGTCTACTTCTAGCAACCATTCAAATGCGGCGGTTACTCAACCGACCGACAACAACGCC
AGTCCGGAAGCGAGCCCTCCTCAACCGAAACGCACAAACGCGTTACCTCCAAGACTATCCTTACATCAAGCAAGC
GGAAGTGGGGATCTTTCGGCATGGGCGGGCATGCTGCTTTCTGGACTATCATCCGACCTTGATGACAAGCTGACC
TTGGGCCCTTCACCCCTGGGCCCAACACCACTGACACCCCAGTCAGCGCCTGCTAGTGCTGCAACTCAAGGGCCT
TCCTCGTTTACAGTTTCAAACCGACCCACGCATACCTCCCATTCGCGTTCCCTAGGCGGCGAAAGTTCAAAAGCG
AGACCTGAACCATTGTCAGAGTTGGAGGAACCTATTGATAATGATGCTCAGTATGCCAATCTTTCTCCGCCATGG
ACTGGAGACGCTGGTAGTAGCTCCCCACTGTGGTCAGAAATCGAAGGCATTCTGAGCCAAGGGCGGTCGCCCACG
GCCAGTGAAGATCGCCACGAACCTGGCCCTTATTCTGCAGCCCTTGCCGAAACCTTCTCTCCGACACTGCCCTTC
TCTCCCGAGGAAGATCGGATGGCACAGGAGCGTAGGCTGAGGAACGAGGCGTCGAGGGAGCGATTGGAGCGGGAG
GAGGACTTGAACCGCCTGAGCGTCAACACTGCTCGGCCTAACCGAGATTCAAGTCGAAGCAGTACGTCGACGGTG
GGGCCAACGACGATTGTGCGAAACGTCTCCGTGGCTAGACGAGCAGGTGCATTCGTCATCAACAACTCGAACCCT
GTTTCTCCAATTGACCACGATGCATCCTCAGTCCCTCCAACGCCCATCGTCCCTCCTCCAAGGCAGCTACCCAAT
CGCCCAGCTCCTATCGATGCTGGTCATTCACCATCTCCTCCGAACTCTTCATTCGACAGCGAAGAAAGCTCTGCA
TCAAGTTCCCAATCGCAGGATCGTTACCCTACACCGACGACGGCCAACTCAACGTCTTCTCCCCTCCGTTACTAC
CTGGAACCTTCACCATCTCCTTCGCAAGCATCGTTCTCGCCGGTAGTAGCACGCCACAAGGAGTATCCTAACGTC
CCACCGGCGTATGACATCGACGAAGATCTCGACGAGGACGACGAGGAGGGAACCAACCTCATTATTCCGCACCAA
ATCATCACCGCCCCATCTCCTCAGGCCAACCGACCGACAATCGTCATCGAGAACGTCTCACCGGGCGGAGCGCTC
TCCACAGCTCTTCCCACCGGCACACCAGCCTCTCCCTTCCAACGCTACCGAGGTTGGCTATCCGAAGTCGTCCAA
CCACTAGAAGAATACATCGACGAAGGCGTCGATCCTCGGGACCATTACCTAGACCTGAAAGAAATCGCAGAAGGC
GAAAGCGGCTCCGTCTTCTCTGCCCGACTTATCCAGAAAGACGCAGACAAACTCCGGCTACCTGCGCACGTCAAG
GCTCAGGACGCAGACGACTTTGCCAACAACCGGGAAGTGTTAGTGGCTATCAAGAGTGTGGCGATTGTGCCCTCA
GGGTCGCCCAAACTCAAGGACCTACAGCACGAGCTTGGTCTCATGAAGGGGTTGCACCACGAAAACGTCATCGGT
CTAGATTCTCTCTATGTCGATTTCTTAGAAGATACCCTGTGGATAAGGATGGAACTAATGGAAAGGAGTCTGGCG
GATATTATTGGTCTTGTGGATGCTGGGTTGATGCTGCCGGATCGGATGATGGCCAGGTTTGCCAGTGATATCTTG
AGCGGCCTCGATTATCTACAACGACATCACATTGCCCATCGCGACGTGCGATCGGATAACTTGCTGATAAACAAG
CATGGGGTTCTGAAACTAACCGACTTTGCGAATGCTGTGCAAGTGTCTGCTCAAAATCCAATGCGGACAGAGCCG
GCTGGTGTGCTGTACTGGCAGGCTCCAGAAGTAAGAAGCCCACCGTACAATGCTATGAAGGTCGATGTTTGGTCT
CTGGGGGCCACCGTCTGGGAGATGGCCGAAACGCAACCACCTTTTGCCGACACTAACGAGTTTGGAGATCGCTGG
CCACCACTCTCTAGACCCCAGCTGGTCTCACCCGCTTTCCACGAGTTCCTCCGGCTCTGCTCTGAACCTGCTGCA
AGTCGTCCTACGGCTGGGGAGCTCTTGAAGACACCTTTCGTCAAGAACGCTTGCGGACGAGCGGTCATCGTCCAA
CTTTTGTCTCAGTGCATAGCCATCGAGTCTGCTTTCGAGTAA
Length 3492

Transcript

Sequence id CopciAB_498122.T0
Sequence >CopciAB_498122.T0
CAGTTGACACCAACCACATCAGCCCAGCAATTTCAACCAACAGCGACGGCACTCCTGATTTCTGCCTTGTGCTCG
ACGACAACGACGGCGACGAGACCCCCTCAACGACGTGGAACAGACTGATGCCTTGCTAGTTAGGGCGCAGACAAC
ATGGCAAGCAGCACGAGCGCGTCGGGTCCTTCATCCACCACCCTGGGTTCCAGGTTTTCGACCTTAAAGGCCTTC
AAGTTCAGGGACAATAGACCACCACCGCCGCCTCCAAAGGACGAATATTATCTTAGGAACAGGTCGATGGCCTCG
TTGTCGCCAGACGCGGTTTCAATTCCACCAAACTCACCGCTGTCGCCGCAACCCCACCGGCTGTACACATCACAG
ACATCGCACGACCCAAACCAGTCAACGATGTCGCTAACGTCGTCGATAGCCTCCGGTTTATCCTCGCCACCCACG
GAAGGCAAAAGACCACAGTCCAGGGGAAAGGAAAAGGCGCTCTCCTTTTTGAAGTTTGGCAAACGGAGTCCCAAA
TCGCCTCCAACCAAGGACGCCAGTTGGGACAGCGCCGTACCTCCGTTACCGTCGAACGGCGACGATGGGATCTCC
ACGCCGTTCAATTTCCAGCACAACATTCACGTTAACGAAGGACTCGTTGGCCTCCCTCCAACTTGGTCAGCAGCG
CTGTCGCAAGCAGGGTTTTCTGACGAGGAAATAATCGCCATCCACAACCGTCGCGCAGCAGGTTCGCGATCCCCG
AATTCCCAATATGTGCTGAACGCTCGTCCACCTTCTCCCCGTATACCCCACCCGTATCAGCAGAGTGCCTCCAAT
GTCCCGATCATTGCGCAGCCTGGCCCAAGAACGACGTCTTTGCCCAGACAGGTCTCGGACGCATCGCTGAGGAGC
ACTTCGACGCGCCAGCGGCACCCGATACCCTTTGGTAGCCCTGCGTCCGCGTCAACAGCGTCGTTACATTCCAGC
AATGCCGGAAGTATCAGCAACATCAAAGCGGTTCGACAAGGTGCTTCTCAAGACCACTCTAGTCGGAACCACACT
CCGCAACTATCAATTTCTTATTCGTCCGACTCCAATCACAGCGGTGTCAGTGGTGAAGATGTCTATCAGCAGTCG
AGGAATGGCAATTTCCCAAAGGACGTGTCAACACCTCCCGGTAAACCTGCACACGCTGCCAACCCTTCGATCGCT
CAGTCATTCATGTCTCAAGCTTCATCACTTCTGAATGGTCACAGTCACAATCGTAACGAATCAAACGCCTCTTCG
ACATCCAAGCGCCTGTTCGGGAGCCAACCTTCCCTATGGTCTTCGCCGTCGTCATCTTCAACTGCAAGTCGACCA
CAAACAGCTGCCAATACGTCTACTTCTAGCAACCATTCAAATGCGGCGGTTACTCAACCGACCGACAACAACGCC
AGTCCGGAAGCGAGCCCTCCTCAACCGAAACGCACAAACGCGTTACCTCCAAGACTATCCTTACATCAAGCAAGC
GGAAGTGGGGATCTTTCGGCATGGGCGGGCATGCTGCTTTCTGGACTATCATCCGACCTTGATGACAAGCTGACC
TTGGGCCCTTCACCCCTGGGCCCAACACCACTGACACCCCAGTCAGCGCCTGCTAGTGCTGCAACTCAAGGGCCT
TCCTCGTTTACAGTTTCAAACCGACCCACGCATACCTCCCATTCGCGTTCCCTAGGCGGCGAAAGTTCAAAAGCG
AGACCTGAACCATTGTCAGAGTTGGAGGAACCTATTGATAATGATGCTCAGTATGCCAATCTTTCTCCGCCATGG
ACTGGAGACGCTGGTAGTAGCTCCCCACTGTGGTCAGAAATCGAAGGCATTCTGAGCCAAGGGCGGTCGCCCACG
GCCAGTGAAGATCGCCACGAACCTGGCCCTTATTCTGCAGCCCTTGCCGAAACCTTCTCTCCGACACTGCCCTTC
TCTCCCGAGGAAGATCGGATGGCACAGGAGCGTAGGCTGAGGAACGAGGCGTCGAGGGAGCGATTGGAGCGGGAG
GAGGACTTGAACCGCCTGAGCGTCAACACTGCTCGGCCTAACCGAGATTCAAGTCGAAGCAGTACGTCGACGGTG
GGGCCAACGACGATTGTGCGAAACGTCTCCGTGGCTAGACGAGCAGGTGCATTCGTCATCAACAACTCGAACCCT
GTTTCTCCAATTGACCACGATGCATCCTCAGTCCCTCCAACGCCCATCGTCCCTCCTCCAAGGCAGCTACCCAAT
CGCCCAGCTCCTATCGATGCTGGTCATTCACCATCTCCTCCGAACTCTTCATTCGACAGCGAAGAAAGCTCTGCA
TCAAGTTCCCAATCGCAGGATCGTTACCCTACACCGACGACGGCCAACTCAACGTCTTCTCCCCTCCGTTACTAC
CTGGAACCTTCACCATCTCCTTCGCAAGCATCGTTCTCGCCGGTAGTAGCACGCCACAAGGAGTATCCTAACGTC
CCACCGGCGTATGACATCGACGAAGATCTCGACGAGGACGACGAGGAGGGAACCAACCTCATTATTCCGCACCAA
ATCATCACCGCCCCATCTCCTCAGGCCAACCGACCGACAATCGTCATCGAGAACGTCTCACCGGGCGGAGCGCTC
TCCACAGCTCTTCCCACCGGCACACCAGCCTCTCCCTTCCAACGCTACCGAGGTTGGCTATCCGAAGTCGTCCAA
CCACTAGAAGAATACATCGACGAAGGCGTCGATCCTCGGGACCATTACCTAGACCTGAAAGAAATCGCAGAAGGC
GAAAGCGGCTCCGTCTTCTCTGCCCGACTTATCCAGAAAGACGCAGACAAACTCCGGCTACCTGCGCACGTCAAG
GCTCAGGACGCAGACGACTTTGCCAACAACCGGGAAGTGTTAGTGGCTATCAAGAGTGTGGCGATTGTGCCCTCA
GGGTCGCCCAAACTCAAGGACCTACAGCACGAGCTTGGTCTCATGAAGGGGTTGCACCACGAAAACGTCATCGGT
CTAGATTCTCTCTATGTCGATTTCTTAGAAGATACCCTGTGGATAAGGATGGAACTAATGGAAAGGAGTCTGGCG
GATATTATTGGTCTTGTGGATGCTGGGTTGATGCTGCCGGATCGGATGATGGCCAGGTTTGCCAGTGATATCTTG
AGCGGCCTCGATTATCTACAACGACATCACATTGCCCATCGCGACGTGCGATCGGATAACTTGCTGATAAACAAG
CATGGGGTTCTGAAACTAACCGACTTTGCGAATGCTGTGCAAGTGTCTGCTCAAAATCCAATGCGGACAGAGCCG
GCTGGTGTGCTGTACTGGCAGGCTCCAGAAGTAAGAAGCCCACCGTACAATGCTATGAAGGTCGATGTTTGGTCT
CTGGGGGCCACCGTCTGGGAGATGGCCGAAACGCAACCACCTTTTGCCGACACTAACGAGTTTGGAGATCGCTGG
CCACCACTCTCTAGACCCCAGCTGGTCTCACCCGCTTTCCACGAGTTCCTCCGGCTCTGCTCTGAACCTGCTGCA
AGTCGTCCTACGGCTGGGGAGCTCTTGAAGACACCTTTCGTCAAGAACGCTTGCGGACGAGCGGTCATCGTCCAA
CTTTTGTCTCAGTGCATAGCCATCGAGTCTGCTTTCGAGTAAATGCTTCTTCTATTGATATTCATCCTTTTTTCA
CTGTTTTGCATCTGGAATACTGATCGATATACATACACCCATTCACCGTCTTCTTTCTGTTCTTCGCATTCGACC
ATCTTGATTTTGGGGGCATATTATTTTCATTTATGCGTTTATCTATTTACCCATTTTGTTGTTCAAACGTGTTGT
TGTTGTTGTTACCGCGGCGACCGGATTCACAGTTCCTCGATCTTTCCAGCTACATTTTCTACCGCATGTTTCAGC
CTTAAGGACTCCTTGACAACCATATCGTTTTCATCTTCACTGCACTCAGCGATGAATGTTGCTGTCTCTGCCACG
AAACCTAATACCGTACCATGTTTAGTTTCACCGCACTCCAATGGCATACGACAGAACTACTACTCACCAAGA
Length 4047

Gene

Sequence id CopciAB_498122.T0
Sequence >CopciAB_498122.T0
CAGTTGACACCAACCACATCAGCCCAGCAATTTCAACCAACAGCGACGGCACTCCTGATTTCTGCCTTGTGCTCG
ACGACAACGACGGCGACGAGACCCCCTCAACGACGTGGAACAGACTGATGCCTTGCTAGTTAGGGCGCAGACAAC
ATGGCAAGCAGCACGAGCGCGTCGGGTCCTTCATCCACCACCCTGGGTTCCAGGTTTTCGACCTTAAAGGCCTTC
AAGTTCAGGGACAATAGACCACCACCGCCGCCTCCAAAGGACGAATATTATCTTAGGAACAGGTCGATGGCCTCG
TTGTCGCCAGACGCGGTTTCAATTCCACCAAACTCACCGCTGTCGCCGCAACCCCACCGGCTGTACACATCACAG
ACATCGCACGACCCAAACCAGTCAACGATGTCGCTAACGTCGTCGATAGCCTCCGGTTTATCCTCGCCACCCACG
GAAGGCAAAAGACCACAGTCCAGGGGAAAGGAAAAGGCGCTCTCCTTTTTGAAGTTTGGCAAACGGAGTCCCAAA
TCGCCTCCAACCAAGGACGCCAGTTGGGACAGCGCCGTACCTCCGTTACCGTCGAACGGCGACGATGGGATCTCC
ACGCCGTTCAATTTCCAGGTCAGTCCAAGTGTAGACGCTTAGTGTTCAACCCTGACGTTTTGGCCATCCACTCCA
GCACAACATTCACGTTAACGAAGGGTGAGTGAGAATCTAGATGTGATCCGTTTCCCTACTCACACCACGGTAGAC
TCGTTGGCCTCCCTCCAACTTGGTCAGCAGCGCTGTCGCAAGCAGGGTTTTCTGACGAGGAAATAATCGCCATCC
ACAACCGTCGCGCAGCAGGTTCGCGATCCCCGAATTCCCAATATGTGCTGAACGCTCGTCCACCTTCTCCCCGTA
TACCCCACCCGTATCAGCAGAGTGCCTCCAATGTCCCGATCATTGCGCAGCCTGGCCCAAGAACGACGTCTTTGC
CCAGACAGGTCTCGGACGCATCGCTGAGGAGCACTTCGACGCGCCAGCGGCACCCGATACCCTTTGGTAGCCCTG
CGTCCGCGTCAACAGCGTCGTTACATTCCAGCAATGCCGGAAGTATCAGCAACATCAAAGCGGTTCGACAAGGTG
CTTCTCAAGACCACTCTAGTCGGAACCACACTCCGCAACTATCAATTTCTTATTCGTCCGACTCCAATCACAGCG
GTGTCAGTGGTGAAGATGTCTATCAGCAGTCGAGGAATGGCAATTTCCCAAAGGACGTGTCAACACCTCCCGGTA
AACCTGCACACGCTGCCAACCCTTCGATCGCTCAGTCATTCATGTCTCAAGCTTCATCACTTCTGAATGGTCACA
GTCACAATCGTAACGAATCAAACGCCTCTTCGACATCCAAGCGCCTGTTCGGGAGCCAACCTTCCCTATGGTCTT
CGCCGTCGTCATCTTCAACTGCAAGTCGACCACAAACAGCTGCCAATACGTCTACTTCTAGCAACCATTCAAATG
CGGCGGTTACTCAACCGACCGACAACAACGCCAGTCCGGAAGCGAGCCCTCCTCAACCGAAACGCACAAACGCGT
TACCTCCAAGACTATCCTTACATCAAGCAAGCGGAAGTGGGGATCTTTCGGCATGGGCGGGCATGCTGCTTTCTG
GACTATCATCCGACCTTGATGACAAGCTGACCTTGGGCCCTTCACCCCTGGGCCCAACACCACTGACACCCCAGT
CAGCGCCTGCTAGTGCTGCAACTCAAGGGCCTTCCTCGTTTACAGTTTCAAACCGACCCACGCATACCTCCCATT
CGCGTTCCCTAGGCGGCGAAAGTTCAAAAGCGAGACCTGAACCATTGTCAGAGTTGGAGGAACCTATTGATAATG
ATGCTCAGTATGCCAATCTTTCTCCGCCATGGACTGGAGACGCTGGTAGTAGCTCCCCACTGTGGTCAGAAATCG
AAGGCATTCTGAGCCAAGGGCGGTCGCCCACGGCCAGTGAAGATCGCCACGAACCTGGCCCTTATTCTGCAGCCC
TTGCCGAAACCTTCTCTCCGACACTGCCCTTCTCTCCCGAGGAAGATCGGATGGCACAGGAGCGTAGGCTGAGGA
ACGAGGCGTCGAGGGAGCGATTGGAGCGGGAGGAGGACTTGAACCGCCTGAGCGTCAACACTGCTCGGCCTAACC
GAGATTCAAGTCGAAGCAGTACGTCGACGGTGGGGCCAACGACGATTGTGCGAAACGTCTCCGTGGCTAGACGAG
CAGGTGCATTCGTCATCAACAACTCGAACCCTGTTTCTCCAATTGACCACGATGCATCCTCAGTCCCTCCAACGC
CCATCGTCCCTCCTCCAAGGCAGCTACCCAATCGCCCAGCTCCTATCGATGCTGGTCATTCACCATCTCCTCCGA
ACTCTTCATTCGACAGCGAAGAAAGCTCTGCATCAAGTTCCCAATCGCAGGATCGTTACCCTACACCGACGACGG
CCAACTCAACGTCTTCTCCCCTCCGTTACTACCTGGAACCTTCACCATCTCCTTCGCAAGCATCGTTCTCGCCGG
TAGTAGCACGCCACAAGGAGTATCCTAACGTCCCACCGGCGTATGACATCGACGAAGATCTCGACGAGGACGACG
AGGAGGGAACCAACCTCATTATTCCGCACCAAATCATCACCGCCCCATCTCCTCAGGCCAACCGACCGACAATCG
TCATCGAGAACGTCTCACCGGGCGGAGCGCTCTCCACAGCTCTTCCCACCGGCACACCAGCCTCTCCCTTCCAAC
GCTACCGAGGTTGGCTATCCGAAGTCGTCCAACCACTAGAAGAATACATCGACGAAGGCGTCGATCCTCGGGACC
ATTACCTAGACCTGAAAGAAATCGCAGAAGGCGAAAGCGGCTCCGTCTTCTCTGCCCGACTTATCCAGAAAGACG
CAGACAAACTCCGGCTACCTGCGCACGTCAAGGCTCAGGACGCAGACGACTTTGCCAACAACCGGGAAGTGTTAG
TGGCTATCAAGAGTGTGGCGATTGTGCCCTCAGGGTCGCCCAAACTCAAGGACCTACAGCACGAGCTTGGTCTCA
TGAAGGGGTTGCACCACGAAAACGTCATCGGTCTAGATTCTCTCTATGTCGATTTCTTAGAAGATACCCTGTGGA
TAAGGATGGAACTAATGGAAAGGAGTCTGGCGGATATTATTGGTCTTGTGGATGCTGGGTTGATGCTGCCGGATC
GGATGATGGCCAGGTTTGCCAGTGATGTATGTCCTTCCTTTTTGCGTTCTTCCTGCCCCTCTTTGTGCTGACTTT
GTGCTCTCGTCTTGTAGATCTTGAGCGGCCTCGATTATCTACAACGACATCACATTGCCCATCGCGACGTGCGAT
CGGATAACTTGCTGATAAACAAGCATGGGGTTCTGAAACTAAGTAAGCAACTTCGATCTTCGTTCATTCAAACTA
GTTCATCTAAGTGCGTGTTTCCAGCCGACTTTGCGAATGCTGTGCAAGTGTCTGCTCAAAATCCAATGCGGACAG
AGCCGGCTGGTGTGCTGTACTGGCAGGCTCCAGAAGTAAGAAGGTCAGTCATGCTTTGTATTATCACTTCCCGAT
GTCCTGAGGTTTGCTAACATTCCTTTCAGCCCACCGTACAATGCTATGAAGGTCGATGTTTGGTCTCTGGGGGCC
ACCGTCTGGGAGATGGCCGAAACGCAACCACCTTTTGCCGACACTAACGAGTTTGGAGATCGCTGGCCACCACTC
TCTAGACCCCAGCTGGTCTCACCCGCTTTCCACGAGTTCCTCCGGCTCTGCTCTGAACCTGCTGCAAGTCGTCCT
ACGGCTGGGGAGCTCTTGAAGGTAGGCATCTTCATTGACCTTGTCCGTGTTTCTGTAACTCACATCAATCTCCAG
ACACCTTTCGTCAAGAACGCTTGCGGACGAGCGGTCATCGTCCAACTTTTGTCTCAGTGCATAGCCATCGAGTCT
GCTTTCGAGTAAATGCTTCTTCTATTGATATTCATCCTTTTTTCACTGTTTTGCATCTGGAATACTGATCGATAT
ACATACACCCATTCACCGTCTTCTTTCTGTTCTTCGCATTCGACCATCTTGATTTTGGGGGCATATTATTTTCAT
TTATGCGTTTATCTATTTACCCATTTTGTTGTTCAAACGTGTTGTTGTTGTTGTTACCGCGGCGACCGGATTCAC
AGTTCCTCGATCTTTCCAGCTACATTTTCTACCGCATGTTTCAGCCTTAAGGACTCCTTGACAACCATATCGTTT
TCATCTTCACTGCACTCAGCGATGAATGTTGCTGTCTCTGCCACGAAACCTAATACCGTACCATGTTTAGTTTCA
CCGCACTCCAATGGCATACGACAGAACTACTACTCACCAAGA
Length 4392